| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668204
Identifier: 15668204
GI number: 15668204
Start: 35437
End: 36387
Strand: Reverse
Name: 15668204
Synonym: MJ0034
Alternate gene names: NA
Gene position: 36387-35437 (Counterclockwise)
Preceding gene: 15668205
Following gene: 15668199
Centisome position: 2.19
GC content: 34.28
Gene sequence:
>951_bases ATGAGCATCAAAGAGGAATTAATGGAAATAATTGAAGCAATTAAATATACGTCTGAAAAACCTGAAGAGATTGTTCATGG TAAAGGACCAAGAATCATTGTTAAAGAGAGTAGGATTATTGATGTTCAAGGAGATGAAGGAATAATATTAGAAGGGAAGG AAGAGGATGGAAAGATAAAGGCAAAGATTATTGTTAAAAAAGGCTATAAATTTAAATACCCAATTCACATGTGCTTTGGA ATCACTGAGGAAAATATATCTCAAATCATAGATGTTGAAATCATCTTAGAGGAGGATAGCTCAATCTCTCTAATGTCTCA CTGCTCATTTCCAAAAGGTAAAGGAATTAAGCATATTATGAACGGCATTATAAAGATTGGTAAGAATGCAAAGTTCTCCT ATAATGAATTCCACTACCATGGAATGGATGGAGATATTTTAGTTAAGCCAACTGTAAAAGTTGAGATTGATGAAGGTGGC ATCTATATATCAAACTTCACATTAACTAAGGGAAGGATAGGGACTTTGGATATAGAACAGGAGATTATTGCCAAAAAAGA TGCAATAATTGATATAACCACAAGAACATACGCTATAAAGGAGGATGTTGTTAAGGTTAATGAAGTTGTTAAGTTGAATG GAGAAAATGCTAAATGCATTATAAAGAGTAGAGGAGCGGCGATGGATAACTCAAAAATATCCCTAAAGTTAAAGATTGAA GGAAACGCTCCATACAGCAAAGGACATATTGATTGTGCTGAAATAGTTAAAGGAAATGCTGAGGTTGAATCAATCCCAAT AGTTGTTGTTAGAGATGATAAAGCAAGAATAACCCATGAGGCGGCAATTGGAAGTGTTGATAAAAAGCAGTTAGAGACGT TGATGGCTAAGGGATTGGATGAGGATGAGGCAACTGAAATAATTGTTAAGGGAATGATAGGGGATTTATAA
Upstream 100 bases:
>100_bases GTTATAGGTATCGCAATAGGAGTTTCTCCTATGCTGAGGAAAATGCTACAAAAAAGTCCCAGAGGAGAGGGAATAAAATT AAAATCCCAGAGGGAGAGAA
Downstream 100 bases:
>100_bases AAATATTTGGCGATGATGACAATTTCGCTATCTGATTCTGTGATGACTACTCCCGCAGCTGAGCCAAACCATTATTTTAA AGATTTTTTAGATATTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIKAKIIVKKGYKFKYPIHMCFG ITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIMNGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGG IYISNFTLTKGRIGTLDIEQEIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIE GNAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKGMIGDL
Sequences:
>Translated_316_residues MSIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIKAKIIVKKGYKFKYPIHMCFG ITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIMNGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGG IYISNFTLTKGRIGTLDIEQEIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIE GNAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKGMIGDL >Mature_315_residues SIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIKAKIIVKKGYKFKYPIHMCFGI TEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIMNGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGGI YISNFTLTKGRIGTLDIEQEIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIEG NAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKGMIGDL
Specific function: Unknown
COG id: COG0719
COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0051 (ycf24) family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y034_METJA (Q60349)
Other databases:
- EMBL: L77117 - PIR: B64304 - RefSeq: NP_246997.1 - ProteinModelPortal: Q60349 - GeneID: 1450872 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0034 - NMPDR: fig|243232.1.peg.34 - TIGR: MJ0034 - HOGENOM: HBG539284 - OMA: MAKGLTE - ProtClustDB: CLSK865354 - BioCyc: MJAN243232:MJ_0034-MONOMER - InterPro: IPR000825
Pfam domain/function: PF01458 UPF0051
EC number: NA
Molecular weight: Translated: 35022; Mature: 34891
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIK CCHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCEEEEEECCCEEEEECCCCCCEEE AKIIVKKGYKFKYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIM EEEEEECCCEEECCEEEEEECCHHHHHHEEEEEEEEECCCCEEEHHHCCCCCCCCHHHHH NGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGGIYISNFTLTKGRIGTLDIEQ HHHHCCCCCCCEEECEEEEECCCCCEEECCEEEEEECCCCEEEEEEEEECCCEEEEECHH EIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIE HHHHCCCCEEEEEECEEEHHHHHHEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEC GNAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLD CCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCEEEHHHHCCCCCHHHHHHHHHCCCC EDEATEIIVKGMIGDL CHHHHHHHEEHHHCCC >Mature Secondary Structure SIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIK CHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCEEEEEECCCEEEEECCCCCCEEE AKIIVKKGYKFKYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIM EEEEEECCCEEECCEEEEEECCHHHHHHEEEEEEEEECCCCEEEHHHCCCCCCCCHHHHH NGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGGIYISNFTLTKGRIGTLDIEQ HHHHCCCCCCCEEECEEEEECCCCCEEECCEEEEEECCCCEEEEEEEEECCCEEEEECHH EIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIE HHHHCCCCEEEEEECEEEHHHHHHEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEC GNAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLD CCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCEEEHHHHCCCCCHHHHHHHHHCCCC EDEATEIIVKGMIGDL CHHHHHHHEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087