Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668204

Identifier: 15668204

GI number: 15668204

Start: 35437

End: 36387

Strand: Reverse

Name: 15668204

Synonym: MJ0034

Alternate gene names: NA

Gene position: 36387-35437 (Counterclockwise)

Preceding gene: 15668205

Following gene: 15668199

Centisome position: 2.19

GC content: 34.28

Gene sequence:

>951_bases
ATGAGCATCAAAGAGGAATTAATGGAAATAATTGAAGCAATTAAATATACGTCTGAAAAACCTGAAGAGATTGTTCATGG
TAAAGGACCAAGAATCATTGTTAAAGAGAGTAGGATTATTGATGTTCAAGGAGATGAAGGAATAATATTAGAAGGGAAGG
AAGAGGATGGAAAGATAAAGGCAAAGATTATTGTTAAAAAAGGCTATAAATTTAAATACCCAATTCACATGTGCTTTGGA
ATCACTGAGGAAAATATATCTCAAATCATAGATGTTGAAATCATCTTAGAGGAGGATAGCTCAATCTCTCTAATGTCTCA
CTGCTCATTTCCAAAAGGTAAAGGAATTAAGCATATTATGAACGGCATTATAAAGATTGGTAAGAATGCAAAGTTCTCCT
ATAATGAATTCCACTACCATGGAATGGATGGAGATATTTTAGTTAAGCCAACTGTAAAAGTTGAGATTGATGAAGGTGGC
ATCTATATATCAAACTTCACATTAACTAAGGGAAGGATAGGGACTTTGGATATAGAACAGGAGATTATTGCCAAAAAAGA
TGCAATAATTGATATAACCACAAGAACATACGCTATAAAGGAGGATGTTGTTAAGGTTAATGAAGTTGTTAAGTTGAATG
GAGAAAATGCTAAATGCATTATAAAGAGTAGAGGAGCGGCGATGGATAACTCAAAAATATCCCTAAAGTTAAAGATTGAA
GGAAACGCTCCATACAGCAAAGGACATATTGATTGTGCTGAAATAGTTAAAGGAAATGCTGAGGTTGAATCAATCCCAAT
AGTTGTTGTTAGAGATGATAAAGCAAGAATAACCCATGAGGCGGCAATTGGAAGTGTTGATAAAAAGCAGTTAGAGACGT
TGATGGCTAAGGGATTGGATGAGGATGAGGCAACTGAAATAATTGTTAAGGGAATGATAGGGGATTTATAA

Upstream 100 bases:

>100_bases
GTTATAGGTATCGCAATAGGAGTTTCTCCTATGCTGAGGAAAATGCTACAAAAAAGTCCCAGAGGAGAGGGAATAAAATT
AAAATCCCAGAGGGAGAGAA

Downstream 100 bases:

>100_bases
AAATATTTGGCGATGATGACAATTTCGCTATCTGATTCTGTGATGACTACTCCCGCAGCTGAGCCAAACCATTATTTTAA
AGATTTTTTAGATATTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIKAKIIVKKGYKFKYPIHMCFG
ITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIMNGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGG
IYISNFTLTKGRIGTLDIEQEIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIE
GNAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKGMIGDL

Sequences:

>Translated_316_residues
MSIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIKAKIIVKKGYKFKYPIHMCFG
ITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIMNGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGG
IYISNFTLTKGRIGTLDIEQEIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIE
GNAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKGMIGDL
>Mature_315_residues
SIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIKAKIIVKKGYKFKYPIHMCFGI
TEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIMNGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGGI
YISNFTLTKGRIGTLDIEQEIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIEG
NAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKGMIGDL

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y034_METJA (Q60349)

Other databases:

- EMBL:   L77117
- PIR:   B64304
- RefSeq:   NP_246997.1
- ProteinModelPortal:   Q60349
- GeneID:   1450872
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0034
- NMPDR:   fig|243232.1.peg.34
- TIGR:   MJ0034
- HOGENOM:   HBG539284
- OMA:   MAKGLTE
- ProtClustDB:   CLSK865354
- BioCyc:   MJAN243232:MJ_0034-MONOMER
- InterPro:   IPR000825

Pfam domain/function: PF01458 UPF0051

EC number: NA

Molecular weight: Translated: 35022; Mature: 34891

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIK
CCHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCEEEEEECCCEEEEECCCCCCEEE
AKIIVKKGYKFKYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIM
EEEEEECCCEEECCEEEEEECCHHHHHHEEEEEEEEECCCCEEEHHHCCCCCCCCHHHHH
NGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGGIYISNFTLTKGRIGTLDIEQ
HHHHCCCCCCCEEECEEEEECCCCCEEECCEEEEEECCCCEEEEEEEEECCCEEEEECHH
EIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIE
HHHHCCCCEEEEEECEEEHHHHHHEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEC
GNAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLD
CCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCEEEHHHHCCCCCHHHHHHHHHCCCC
EDEATEIIVKGMIGDL
CHHHHHHHEEHHHCCC
>Mature Secondary Structure 
SIKEELMEIIEAIKYTSEKPEEIVHGKGPRIIVKESRIIDVQGDEGIILEGKEEDGKIK
CHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCEEEEEECCCEEEEECCCCCCEEE
AKIIVKKGYKFKYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIM
EEEEEECCCEEECCEEEEEECCHHHHHHEEEEEEEEECCCCEEEHHHCCCCCCCCHHHHH
NGIIKIGKNAKFSYNEFHYHGMDGDILVKPTVKVEIDEGGIYISNFTLTKGRIGTLDIEQ
HHHHCCCCCCCEEECEEEEECCCCCEEECCEEEEEECCCCEEEEEEEEECCCEEEEECHH
EIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISLKLKIE
HHHHCCCCEEEEEECEEEHHHHHHEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEC
GNAPYSKGHIDCAEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLD
CCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCEEEHHHHCCCCCHHHHHHHHHCCCC
EDEATEIIVKGMIGDL
CHHHHHHHEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087