| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668183
Identifier: 15668183
GI number: 15668183
Start: 12869
End: 13462
Strand: Direct
Name: 15668183
Synonym: MJ0011
Alternate gene names: NA
Gene position: 12869-13462 (Clockwise)
Preceding gene: 15668182
Following gene: 15668186
Centisome position: 0.77
GC content: 29.46
Gene sequence:
>594_bases TTGATAGGAAAATTAAAGAATCTTTTTAAATTAGGAAAAGGGAAAAAAGAAGAAAAAGCTAAAAAGAGTTTAGAAGGAAA AGGATTAATTATATTTGAAAACACAAAAGACGCAATGAGAGCAGAGAGCATTTTAAAAGACAAATATAAAATTAAGGTTG TTGCTCCCCCTCCAGAAATTAGAGAGGGCTGTGATTTGGCAATAGAGTATGAATTAATAGATGAATTTGGAATTAAAAGA GAATTAGAAAGTAATGATATAAAGCCGTTGAAGTTTATCTCTCTAAATGATTATTCTTTAAAACCTCTTGAATTAATAAA AGTTAAAGAGGTAGATGGCTTTATATTGGTCAGATGTGGAAATATGAAAATAACTATTGATAAAGAGGGAAATATAGTCA ATATCTCTGGTGGAGGATGTCCAGATGTACCTTATTTAGCATTAAAATTAAAAGGAAGGAATATTAAAGATATTAAAGAG GAAGAAACACCAAAGAATTTGGGATTTACATTGTGTGCTTATATATTAAATAAGGGGTCTTCCCAACGTGGTCATTCATG GACAATTATAGATTTTGAGGTACTTTCCATTTAA
Upstream 100 bases:
>100_bases AACTATACGGATAGGGCTTTACTGTATGGTTTAAGGTCTGGAGATAGGTTGAGGTATTATATTCCAAAGGATGATGAAAT AGATTTATTAGAGGGATAAC
Downstream 100 bases:
>100_bases ATCAACTGTATAGACCATCAGAGGGAAATCAAAGATTTGAACAAAATCCTTCGGATTTTGTAGCTCGAACCTTCGGTTCG ATTTCCTTACTGGAAGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MIGKLKNLFKLGKGKKEEKAKKSLEGKGLIIFENTKDAMRAESILKDKYKIKVVAPPPEIREGCDLAIEYELIDEFGIKR ELESNDIKPLKFISLNDYSLKPLELIKVKEVDGFILVRCGNMKITIDKEGNIVNISGGGCPDVPYLALKLKGRNIKDIKE EETPKNLGFTLCAYILNKGSSQRGHSWTIIDFEVLSI
Sequences:
>Translated_197_residues MIGKLKNLFKLGKGKKEEKAKKSLEGKGLIIFENTKDAMRAESILKDKYKIKVVAPPPEIREGCDLAIEYELIDEFGIKR ELESNDIKPLKFISLNDYSLKPLELIKVKEVDGFILVRCGNMKITIDKEGNIVNISGGGCPDVPYLALKLKGRNIKDIKE EETPKNLGFTLCAYILNKGSSQRGHSWTIIDFEVLSI >Mature_197_residues MIGKLKNLFKLGKGKKEEKAKKSLEGKGLIIFENTKDAMRAESILKDKYKIKVVAPPPEIREGCDLAIEYELIDEFGIKR ELESNDIKPLKFISLNDYSLKPLELIKVKEVDGFILVRCGNMKITIDKEGNIVNISGGGCPDVPYLALKLKGRNIKDIKE EETPKNLGFTLCAYILNKGSSQRGHSWTIIDFEVLSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y011_METJA (Q60327)
Other databases:
- EMBL: L77117 - PIR: C64301 - RefSeq: NP_246974.1 - ProteinModelPortal: Q60327 - GeneID: 1450850 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0011 - NMPDR: fig|243232.1.peg.11 - TIGR: MJ0011 - HOGENOM: HBG456537 - OMA: GGGCPDV - ProtClustDB: CLSK876036 - BioCyc: MJAN243232:MJ_0011-MONOMER - InterPro: IPR021778
Pfam domain/function: PF11823 DUF3343
EC number: NA
Molecular weight: Translated: 22142; Mature: 22142
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKLKNLFKLGKGKKEEKAKKSLEGKGLIIFENTKDAMRAESILKDKYKIKVVAPPPEI CCCHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCHHH REGCDLAIEYELIDEFGIKRELESNDIKPLKFISLNDYSLKPLELIKVKEVDGFILVRCG HCCCCEEEEEEEHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEC NMKITIDKEGNIVNISGGGCPDVPYLALKLKGRNIKDIKEEETPKNLGFTLCAYILNKGS CEEEEEECCCCEEEECCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHCCCC SQRGHSWTIIDFEVLSI CCCCCEEEEEEEEEECC >Mature Secondary Structure MIGKLKNLFKLGKGKKEEKAKKSLEGKGLIIFENTKDAMRAESILKDKYKIKVVAPPPEI CCCHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCHHH REGCDLAIEYELIDEFGIKRELESNDIKPLKFISLNDYSLKPLELIKVKEVDGFILVRCG HCCCCEEEEEEEHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEC NMKITIDKEGNIVNISGGGCPDVPYLALKLKGRNIKDIKEEETPKNLGFTLCAYILNKGS CEEEEEECCCCEEEECCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHCCCC SQRGHSWTIIDFEVLSI CCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087