| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668181
Identifier: 15668181
GI number: 15668181
Start: 10743
End: 11573
Strand: Direct
Name: 15668181
Synonym: MJ0009
Alternate gene names: NA
Gene position: 10743-11573 (Clockwise)
Preceding gene: 15668180
Following gene: 15668182
Centisome position: 0.65
GC content: 32.37
Gene sequence:
>831_bases ATGATATTTAATGAAAATACTCCAAATTTTATTGATTTTAAGGAATCCTTTAAAGAACTACCCCTATCTGATGAAACGTT TAAAATAATTGAAGAGAATGGAATAAAGCTGAGAGAAATTGCTATTGGAGAGTTTTCTGGGAGAGATAGCGTAGCGGCAA TAATCAAAGCCATCGAAGAAGGGATAGATTTTGTTCTGCCGGTTGTTGCATTTACTGGGACTGACTATGGAAACATAAAT ATATTTTACAAAAACTGGGAGATTGTCAATAAAAGAATCAAAGAAATTGATAAGGATAAAATTTTACTGCCATTGCATTT TATGTTTGAGCCAAAACTCTGGAATGCATTAAATGGGAGATGGGTGGTTTTATCTTTTAAAAGATATGGTTATTACCGTC CATGCATTGGATGCCACGCATATTTAAGAATAATTAGGATTCCTCTGGCAAAGCACTTAGGAGGAAAGATAATTAGTGGA GAGAGACTTTATCACAATGGAGATTTCAAAATTGACCAAATAGAGGAGGTTTTAAATGTCTATAGCAAAATCTGCAGAGA TTTTGATGTTGAGTTAATTCTACCTATAAGATACATAAGAGAGGGAAAGAAAATCAAAGAAATCATAGGAGAAGAATGGG AGCAAGGGGAGAAGCAATTTTCATGTGTATTTAGTGGAAACTATAGAGATAAAGATGGAAAGGTAATTTTTGATAAGGAA GGGATTTTAAAGATGTTAAATGAATTTATCTACCCTGCTTCAGTTGAGATTTTAAAAGAAGGCTACAAAGGAAACTTTAA CTATTTAAATATCGTTAAAAAGCTTATTTAG
Upstream 100 bases:
>100_bases TTAAATGTAAAATGTTTTTGATTGAATTGATGGATATTAAAGAGGTTTTAAGAACTGAGAGAATGTTAAAAGATTATTTA GAGATGTATAGGTGAAATAA
Downstream 100 bases:
>100_bases TGAGAGAATGAGGGCTATTTTAATTCTATTGGATGGTTTGGGAGATAGAGCATCCGAAATTTTGAATAACAAAACTCCTC TACAATTTGCAAAGACTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MIFNENTPNFIDFKESFKELPLSDETFKIIEENGIKLREIAIGEFSGRDSVAAIIKAIEEGIDFVLPVVAFTGTDYGNIN IFYKNWEIVNKRIKEIDKDKILLPLHFMFEPKLWNALNGRWVVLSFKRYGYYRPCIGCHAYLRIIRIPLAKHLGGKIISG ERLYHNGDFKIDQIEEVLNVYSKICRDFDVELILPIRYIREGKKIKEIIGEEWEQGEKQFSCVFSGNYRDKDGKVIFDKE GILKMLNEFIYPASVEILKEGYKGNFNYLNIVKKLI
Sequences:
>Translated_276_residues MIFNENTPNFIDFKESFKELPLSDETFKIIEENGIKLREIAIGEFSGRDSVAAIIKAIEEGIDFVLPVVAFTGTDYGNIN IFYKNWEIVNKRIKEIDKDKILLPLHFMFEPKLWNALNGRWVVLSFKRYGYYRPCIGCHAYLRIIRIPLAKHLGGKIISG ERLYHNGDFKIDQIEEVLNVYSKICRDFDVELILPIRYIREGKKIKEIIGEEWEQGEKQFSCVFSGNYRDKDGKVIFDKE GILKMLNEFIYPASVEILKEGYKGNFNYLNIVKKLI >Mature_276_residues MIFNENTPNFIDFKESFKELPLSDETFKIIEENGIKLREIAIGEFSGRDSVAAIIKAIEEGIDFVLPVVAFTGTDYGNIN IFYKNWEIVNKRIKEIDKDKILLPLHFMFEPKLWNALNGRWVVLSFKRYGYYRPCIGCHAYLRIIRIPLAKHLGGKIISG ERLYHNGDFKIDQIEEVLNVYSKICRDFDVELILPIRYIREGKKIKEIIGEEWEQGEKQFSCVFSGNYRDKDGKVIFDKE GILKMLNEFIYPASVEILKEGYKGNFNYLNIVKKLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y009_METJA (Q60320)
Other databases:
- EMBL: L77117 - PIR: A64301 - RefSeq: NP_246972.1 - GeneID: 1450848 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0009 - NMPDR: fig|243232.1.peg.9 - TIGR: MJ0009 - HOGENOM: HBG540370 - OMA: FEPKLWN - ProtClustDB: CLSK876034 - BioCyc: MJAN243232:MJ_0009-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32241; Mature: 32241
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNENTPNFIDFKESFKELPLSDETFKIIEENGIKLREIAIGEFSGRDSVAAIIKAIEE CCCCCCCCCEECHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHH GIDFVLPVVAFTGTDYGNINIFYKNWEIVNKRIKEIDKDKILLPLHFMFEPKLWNALNGR HHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCCEEEEEHEEECCCHHHCCCCC WVVLSFKRYGYYRPCIGCHAYLRIIRIPLAKHLGGKIISGERLYHNGDFKIDQIEEVLNV EEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCHHHHHHHHHH YSKICRDFDVELILPIRYIREGKKIKEIIGEEWEQGEKQFSCVFSGNYRDKDGKVIFDKE HHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCEEECCC GILKMLNEFIYPASVEILKEGYKGNFNYLNIVKKLI CHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHC >Mature Secondary Structure MIFNENTPNFIDFKESFKELPLSDETFKIIEENGIKLREIAIGEFSGRDSVAAIIKAIEE CCCCCCCCCEECHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHH GIDFVLPVVAFTGTDYGNINIFYKNWEIVNKRIKEIDKDKILLPLHFMFEPKLWNALNGR HHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCCEEEEEHEEECCCHHHCCCCC WVVLSFKRYGYYRPCIGCHAYLRIIRIPLAKHLGGKIISGERLYHNGDFKIDQIEEVLNV EEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCHHHHHHHHHH YSKICRDFDVELILPIRYIREGKKIKEIIGEEWEQGEKQFSCVFSGNYRDKDGKVIFDKE HHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCEEECCC GILKMLNEFIYPASVEILKEGYKGNFNYLNIVKKLI CHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087