Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15646175

GI number: 15646175

Start: 1650094

End: 1650645

Strand: Reverse

Name: Not Available

Synonym: HP1568

Alternate gene names: NA

Gene position: 1650645-1650094 (Counterclockwise)

Preceding gene: 15646176

Following gene: 15646174

Centisome position: 98.97

GC content: 40.4

Gene sequence:

>552_bases
ATGCGTTGGTGGTGTTTTTTGGTGTGTTGTTTTGGTATTTTAAGCGTGATGGACGCTAAAAAATTAGAGAATAAGAATTT
GAAAAAAGAAAGAGAGCTTTTAGAGATTACTGGCAACCAATTTGTAGCGAACGACAAAACCAAAACCGCTGTTATTCAAG
GCAATGTGCAGATCAAAAAGGGTAAAGACCGGTTGTTTGCGGACAAGGTGAGCGTGTTTTTAAACGATAAACGAAAGCCA
GAGCGCTATGAAGCCACAGGGAACACGCATTTTAACATCTTTACAGAGGACAATCGTGAAATCAGCGGGAGTGCTGACAA
GCTCATTTATAACGCGCTGAATGGGGAATACAAATTATTGCAAAATGCGGTGGTTAGAGAAGTGGGGAAATCCAATGTCA
TCACCGGCGATGAAATCATTTTAAACAAAACTAAGGGTTATGCTGATGTGTTGGGGAGCGCGAAACGGCCCGCTAAATTC
GTGTTTGATATGGAAGATATTAATGAAGAAAATCGTAAGGCTAAATTGAAGAAGAAAGGCGAAAAACCATGA

Upstream 100 bases:

>100_bases
TTATTGAAGCTCAAAGCATTCAAGCGCATTTATTCTTAGATGAAATCAAACAAAGCCAAAAAGAAAAGAAAAAATTCCCC
ACTTTCAAAGGAGGTTTTTA

Downstream 100 bases:

>100_bases
TTGTCATTAAAGACGCTCATTTTCTCACTTCTTCAAGCCAACTTTTTCAATGCCCTGCGAGTTTGACTTCTGAAATGGTG
GTTTTAGGGCGCAGCAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Envelope Biogenesis Protein YhbN; Lipopolysaccharide Transport Periplasmic Protein LptA; OstA-Like Protein

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRWWCFLVCCFGILSVMDAKKLENKNLKKERELLEITGNQFVANDKTKTAVIQGNVQIKKGKDRLFADKVSVFLNDKRKP
ERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLLQNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKF
VFDMEDINEENRKAKLKKKGEKP

Sequences:

>Translated_183_residues
MRWWCFLVCCFGILSVMDAKKLENKNLKKERELLEITGNQFVANDKTKTAVIQGNVQIKKGKDRLFADKVSVFLNDKRKP
ERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLLQNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKF
VFDMEDINEENRKAKLKKKGEKP
>Mature_183_residues
MRWWCFLVCCFGILSVMDAKKLENKNLKKERELLEITGNQFVANDKTKTAVIQGNVQIKKGKDRLFADKVSVFLNDKRKP
ERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLLQNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKF
VFDMEDINEENRKAKLKKKGEKP

Specific function: Unknown

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20878; Mature: 20878

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWWCFLVCCFGILSVMDAKKLENKNLKKERELLEITGNQFVANDKTKTAVIQGNVQIKK
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEC
GKDRLFADKVSVFLNDKRKPERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLL
CCCHHHHHHHHHEECCCCCCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHH
QNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKFVFDMEDINEENRKAKLKKKG
HHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEEEEEHHHCCCHHHHHHHHHCC
EKP
CCC
>Mature Secondary Structure
MRWWCFLVCCFGILSVMDAKKLENKNLKKERELLEITGNQFVANDKTKTAVIQGNVQIKK
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEC
GKDRLFADKVSVFLNDKRKPERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLL
CCCHHHHHHHHHEECCCCCCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHH
QNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKFVFDMEDINEENRKAKLKKKG
HHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEEEEEHHHCCCHHHHHHHHHCC
EKP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA