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Identifier: 15646127

GI number: 15646127

Start: 1594490

End: 1594777

Strand: Reverse

Name: Not Available

Synonym: HP1518

Alternate gene names: NA

Gene position: 1594777-1594490 (Counterclockwise)

Preceding gene: 15646128

Following gene: 15646126

Centisome position: 95.62

GC content: 29.86

Gene sequence:

>288_bases
ATGATTCGTTTCGCTCACATCTCGCTCAAAGATTTTATTAAAAAACACAATCCCCAAACACCCACAAAAGAAACTATAGA
AAATTTTGAAAAAGAAATAAACAGCTTATTAGAAAACGCGCCAAGACAAGATGATGAAGAATTTCAAAAAAATGAAATCA
ATAAGTTTTTAGGCAAAGTCTCAAGCATTGAAAAGCATTACACTTATAAAAGCGTGGCATTAAAAAACGCTTTTATAAAC
AACGATAAACTTTTAAAGCATGTGTTTTTAAGCGATGTAAGGAATTAA

Upstream 100 bases:

>100_bases
CCCTAATGTTTCACATGGAACAATTTCAAAGAAAAGCGTTTTATTTAAAATTCATGGTGCTTTTGTTATAATCGTTTTTA
TCCCATTTCAAAGGCGTTTT

Downstream 100 bases:

>100_bases
CATGGATTATAAAAAATTAGATTTACCCAACACAAACTACCCAAATCAAGAGCAACTGAAAGCTTTTGAAACCGCTTTTG
ACGCCTTTTTAGAAACCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Restriction/- System Protein; Type IIS Restriction / N-Terminal Half; Type IIS Restriction/; Type II S Restriction- Protein; Type IIS R-M System Restriction/; Type IIS Restriction- Protein

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIRFAHISLKDFIKKHNPQTPTKETIENFEKEINSLLENAPRQDDEEFQKNEINKFLGKVSSIEKHYTYKSVALKNAFIN
NDKLLKHVFLSDVRN

Sequences:

>Translated_95_residues
MIRFAHISLKDFIKKHNPQTPTKETIENFEKEINSLLENAPRQDDEEFQKNEINKFLGKVSSIEKHYTYKSVALKNAFIN
NDKLLKHVFLSDVRN
>Mature_95_residues
MIRFAHISLKDFIKKHNPQTPTKETIENFEKEINSLLENAPRQDDEEFQKNEINKFLGKVSSIEKHYTYKSVALKNAFIN
NDKLLKHVFLSDVRN

Specific function: Unknown

COG id: COG1002

COG function: function code V; Type II restriction enzyme, methylase subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11219; Mature: 11219

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFAHISLKDFIKKHNPQTPTKETIENFEKEINSLLENAPRQDDEEFQKNEINKFLGKV
CCEEHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SSIEKHYTYKSVALKNAFINNDKLLKHVFLSDVRN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRFAHISLKDFIKKHNPQTPTKETIENFEKEINSLLENAPRQDDEEFQKNEINKFLGKV
CCEEHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SSIEKHYTYKSVALKNAFINNDKLLKHVFLSDVRN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA