| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646113
GI number: 15646113
Start: 1577239
End: 1577955
Strand: Reverse
Name: Not Available
Synonym: HP1504
Alternate gene names: 15646113
Gene position: 1577955-1577239 (Counterclockwise)
Preceding gene: 15646114
Following gene: 15646112
Centisome position: 94.61
GC content: 39.61
Gene sequence:
>717_bases ATGGATAGAAAACTCTTAAGATTATACCAGCCTTTGAACGCTTATTCTTACAACAGCGATTCGCTTTTTTTATACGATTT TTCACGCCCTTTTATCAAAAACAGCGGCGCGATTTTAGACATAGGCTCAGGGTGTGGGATCTTAGGCTTACTCTGCGCCA GAGACAACCCGCTAGCGATCGTTCATTTGGTGGAAAAGGATAACAAAATGGCGTTTTGCTCCCAAAAAAACGCCCTTAAA TTCCCTAACGCTCAAGTGTTTGAGGGCGATTTTTTAGATTTCAATCCCCCGATTTTATATGATATAATTGTGTGCAACCC TCCTTTTTATGCCTTAGGCTCTATCAAATCTAAAATTAAAGGGCATGCGAGGCACCAGAGCGAATTAGACTTCGCTTCTT TGGTGGCTAAAGTGAAAAAATGCCTAAAACCTAAAGGGTATTTTATTTTTTGCTATGAAGCCTTGTCGCTTTGCTTGGTC ATAGAGGGTTTAAAAAGCGTTAAACTCACGCTAGAAACTTTAAGGTTTGTCCAAAGTTTTAAAGACAAAAACGCCCATTT GATGCTTGGAGCGGCTAGGAATAATTCCAAAAGCGCTCTAAAAGTTTTGCCCCCTTTAATCACGCACCATTCCAAAAACC AAAGCGACAACACCAAAGAAGTTTTAAGCATCTATCAAACTTGTAACACTTATTCTATCAAAGCGCTTCTAAACTAG
Upstream 100 bases:
>100_bases ATGCGTCTATGATTGGCGAAGCGTTTAAGGCACTCGCTCTAAAAACCCCTTTTAAAGGACGGTTGTTGCATGCGCAAATC TTAGAAAATGAAGCCCTTTT
Downstream 100 bases:
>100_bases CGCCCTTAAATTAAGGATTAAAAAAATGAAATGTTCGCATTGCCAGTTGGAGTTTAAAGAAAGTGAGCTTTTTAAAGAGG TGATCAATCATAAAGAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: tRNA m6A37 methyltransferase [H]
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MDRKLLRLYQPLNAYSYNSDSLFLYDFSRPFIKNSGAILDIGSGCGILGLLCARDNPLAIVHLVEKDNKMAFCSQKNALK FPNAQVFEGDFLDFNPPILYDIIVCNPPFYALGSIKSKIKGHARHQSELDFASLVAKVKKCLKPKGYFIFCYEALSLCLV IEGLKSVKLTLETLRFVQSFKDKNAHLMLGAARNNSKSALKVLPPLITHHSKNQSDNTKEVLSIYQTCNTYSIKALLN
Sequences:
>Translated_238_residues MDRKLLRLYQPLNAYSYNSDSLFLYDFSRPFIKNSGAILDIGSGCGILGLLCARDNPLAIVHLVEKDNKMAFCSQKNALK FPNAQVFEGDFLDFNPPILYDIIVCNPPFYALGSIKSKIKGHARHQSELDFASLVAKVKKCLKPKGYFIFCYEALSLCLV IEGLKSVKLTLETLRFVQSFKDKNAHLMLGAARNNSKSALKVLPPLITHHSKNQSDNTKEVLSIYQTCNTYSIKALLN >Mature_238_residues MDRKLLRLYQPLNAYSYNSDSLFLYDFSRPFIKNSGAILDIGSGCGILGLLCARDNPLAIVHLVEKDNKMAFCSQKNALK FPNAQVFEGDFLDFNPPILYDIIVCNPPFYALGSIKSKIKGHARHQSELDFASLVAKVKKCLKPKGYFIFCYEALSLCLV IEGLKSVKLTLETLRFVQSFKDKNAHLMLGAARNNSKSALKVLPPLITHHSKNQSDNTKEVLSIYQTCNTYSIKALLN
Specific function: Specifically methylates the adenine in position 37 of tRNA(Val) [H]
COG id: COG4123
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR020596 - InterPro: IPR007848 - InterPro: IPR022882 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.55 [H]
Molecular weight: Translated: 26688; Mature: 26688
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKLLRLYQPLNAYSYNSDSLFLYDFSRPFIKNSGAILDIGSGCGILGLLCARDNPLAI CCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEE VHLVEKDNKMAFCSQKNALKFPNAQVFEGDFLDFNPPILYDIIVCNPPFYALGSIKSKIK EEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH GHARHQSELDFASLVAKVKKCLKPKGYFIFCYEALSLCLVIEGLKSVKLTLETLRFVQSF HHHCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDKNAHLMLGAARNNSKSALKVLPPLITHHSKNQSDNTKEVLSIYQTCNTYSIKALLN CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MDRKLLRLYQPLNAYSYNSDSLFLYDFSRPFIKNSGAILDIGSGCGILGLLCARDNPLAI CCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEE VHLVEKDNKMAFCSQKNALKFPNAQVFEGDFLDFNPPILYDIIVCNPPFYALGSIKSKIK EEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH GHARHQSELDFASLVAKVKKCLKPKGYFIFCYEALSLCLVIEGLKSVKLTLETLRFVQSF HHHCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDKNAHLMLGAARNNSKSALKVLPPLITHHSKNQSDNTKEVLSIYQTCNTYSIKALLN CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA