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Identifier: 15646093

GI number: 15646093

Start: 1557286

End: 1557732

Strand: Reverse

Name: Not Available

Synonym: HP1484

Alternate gene names: NA

Gene position: 1557732-1557286 (Counterclockwise)

Preceding gene: 15646094

Following gene: 15646092

Centisome position: 93.4

GC content: 39.6

Gene sequence:

>447_bases
ATGGGATTTTTGAATGGGTATTTTTTATGGGTTAAGGCTTTCCATGTGATAGCGGTCATTTCGTGGATGGCAGCGTTGTT
TTATTTGCCGCGCCTTTTTGTCTATCATGCAGAAAACGCGCATAAAAAAGAGTTTGTAGGAGTGGTTCAAATCCAAGAAA
AAAAGCTTTATTCCTTTATCGCTTCACCGGCTATGGGTTTTACGCTTATTACAGGGATTTTAATGCTGTTGATAGAGCCT
ACGCTCTTTAAAAGTGGGGGTTGGTTGCATGCTAAATTGGCTTTAGTGGTTTTACTTTTAGCCTATCATTTTTATTGCAA
AAAATGCATGCGCGAGCTGGAAAAAGACCCCACAAGGAGAAACGCAAGGTTTTATCGCGTGTTTAATGAGGCGCCAACGA
TTTTAATGATCCTCATTGTGATTTTAGTGGTTGTCAAGCCTTTTTAA

Upstream 100 bases:

>100_bases
AAGAATTTTTCAAACCAAAGCGTGGAAGTGGAAATCAGCGGCACAAGAGAAAATTTGCAAGCGTTTTTACAACAAAATAA
GATAAATTAGGGAGAGTGGT

Downstream 100 bases:

>100_bases
AGACAAGCCATGAAAAAAGAAAAGTCATGAAAAAAGAAAAGCATCTCAAGCAAGAAAAAATCATCAACATGTTTGATGAT
ATAGCCAGCTCTTACGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGFLNGYFLWVKAFHVIAVISWMAALFYLPRLFVYHAENAHKKEFVGVVQIQEKKLYSFIASPAMGFTLITGILMLLIEP
TLFKSGGWLHAKLALVVLLLAYHFYCKKCMRELEKDPTRRNARFYRVFNEAPTILMILIVILVVVKPF

Sequences:

>Translated_148_residues
MGFLNGYFLWVKAFHVIAVISWMAALFYLPRLFVYHAENAHKKEFVGVVQIQEKKLYSFIASPAMGFTLITGILMLLIEP
TLFKSGGWLHAKLALVVLLLAYHFYCKKCMRELEKDPTRRNARFYRVFNEAPTILMILIVILVVVKPF
>Mature_147_residues
GFLNGYFLWVKAFHVIAVISWMAALFYLPRLFVYHAENAHKKEFVGVVQIQEKKLYSFIASPAMGFTLITGILMLLIEPT
LFKSGGWLHAKLALVVLLLAYHFYCKKCMRELEKDPTRRNARFYRVFNEAPTILMILIVILVVVKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1484_HELPY (O26018)

Other databases:

- EMBL:   AE000511
- PIR:   D64705
- RefSeq:   NP_208275.1
- GeneID:   899808
- GenomeReviews:   AE000511_GR
- KEGG:   hpy:HP1484
- NMPDR:   fig|85962.1.peg.1471
- TIGR:   HP_1484
- HOGENOM:   HBG300950
- OMA:   LYLWIKA
- ProtClustDB:   CLSK551909
- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265
- PIRSF:   PIRSF004638
- TIGRFAMs:   TIGR00701

Pfam domain/function: PF05425 CopD; PF03653 UPF0093

EC number: NA

Molecular weight: Translated: 17159; Mature: 17028

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd6adab0)-; HASH(0xe19ba8c)-; HASH(0xd6cc490)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLNGYFLWVKAFHVIAVISWMAALFYLPRLFVYHAENAHKKEFVGVVQIQEKKLYSFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ASPAMGFTLITGILMLLIEPTLFKSGGWLHAKLALVVLLLAYHFYCKKCMRELEKDPTRR
HCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NARFYRVFNEAPTILMILIVILVVVKPF
CHHHHHHHHCCCHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
GFLNGYFLWVKAFHVIAVISWMAALFYLPRLFVYHAENAHKKEFVGVVQIQEKKLYSFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ASPAMGFTLITGILMLLIEPTLFKSGGWLHAKLALVVLLLAYHFYCKKCMRELEKDPTRR
HCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NARFYRVFNEAPTILMILIVILVVVKPF
CHHHHHHHHCCCHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185