| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646063
GI number: 15646063
Start: 1524949
End: 1525860
Strand: Reverse
Name: Not Available
Synonym: HP1454
Alternate gene names: NA
Gene position: 1525860-1524949 (Counterclockwise)
Preceding gene: 15646064
Following gene: 15646049
Centisome position: 91.49
GC content: 38.93
Gene sequence:
>912_bases ATGAAAAAGATTATTCTTGCATGCCTTATGGCTTTTGTGGGTGCCAATTTAAGCGCAGAGCCTAAGTGGTATAGCAAGGC CTACAACAAAACAAACACCCAAAAAGGCTATCTTTATGGGAGTGGTTCAGCCACTTCTAAAGAGGCTTCTAAACAAAAAG CGTTAGCGGATTTAGTGGCGTCTATTAGCGTGGTGGTTAATTCCCAAATCCATATTCAAAAAAGTCGTGTGGACAATAAG TTAAAATCCAGCGATTCGCAAACGATTAACTTAAAGACCGATGACTTGGAATTGAATAATGTAGAAATTGTCAATCAAGA AGTGCAAAAAGGGATCTACTACACCAGAGTAAGGATCAATCAAAACTTGTTTTTGCAGGGTTTAAGGGATAAGTATAACG CTCTTTATGGGCAGTTTTCCACCTTAATGCCTAAGGTTTGTAAAGGGGTTTTTTTACAGCAATCCAAGAGCATGGGGGAT TTATTGGCTAAAGCGATGCCTATAGAAAGGATTTTAAAAGCGTATTCTGTTCCGGTGGGTTCGTTAGAAAATTATGAAAA AATCTATTATCAAAACGCTTTCAAACCTAAAGTGCAAATCACTTTTGATAACAACGGCGATGCGGAAATCAAAAGCGCTC TCATAAGCGCTTATGCCAGAGTGCTAACCCCTAGTGATGAAGAAAAACTCTATCAAATCAAAAATGAAGTTTTCACAGAC AGTGCTAATGGCATCACGCGCATTAGAGTGGTTGTTAGCGCGAGCGATTGTCAAGGCACGCCTGTATTGAATAGAAGCCT TGAAGTGGATGAAAAGAATAAGAATTTTGCTATCACGCGCTTACAATCTTTGCTTTATAAAGAACTGAAAGATTATGCCA ATAAAGAAGGGCAAGGCAATACGGGGTTATAA
Upstream 100 bases:
>100_bases TAGTGAGCTAAAGGCCACTTTTATTGATACGGATAAAGTTTATGTGCTTCTAAAGATCACTAAGAAGCATGTCGCTTTAA TGAATGAGTAAGGATTAATA
Downstream 100 bases:
>100_bases GCAGGATATCAATCTTGCTTTGTGCTTATTGATTCAGTTTGGTAGCGTTATCATTTTGTTTGGCGTGGCGTTTTGCACCC CTTAAAATAACTCTCCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKKIILACLMAFVGANLSAEPKWYSKAYNKTNTQKGYLYGSGSATSKEASKQKALADLVASISVVVNSQIHIQKSRVDNK LKSSDSQTINLKTDDLELNNVEIVNQEVQKGIYYTRVRINQNLFLQGLRDKYNALYGQFSTLMPKVCKGVFLQQSKSMGD LLAKAMPIERILKAYSVPVGSLENYEKIYYQNAFKPKVQITFDNNGDAEIKSALISAYARVLTPSDEEKLYQIKNEVFTD SANGITRIRVVVSASDCQGTPVLNRSLEVDEKNKNFAITRLQSLLYKELKDYANKEGQGNTGL
Sequences:
>Translated_303_residues MKKIILACLMAFVGANLSAEPKWYSKAYNKTNTQKGYLYGSGSATSKEASKQKALADLVASISVVVNSQIHIQKSRVDNK LKSSDSQTINLKTDDLELNNVEIVNQEVQKGIYYTRVRINQNLFLQGLRDKYNALYGQFSTLMPKVCKGVFLQQSKSMGD LLAKAMPIERILKAYSVPVGSLENYEKIYYQNAFKPKVQITFDNNGDAEIKSALISAYARVLTPSDEEKLYQIKNEVFTD SANGITRIRVVVSASDCQGTPVLNRSLEVDEKNKNFAITRLQSLLYKELKDYANKEGQGNTGL >Mature_303_residues MKKIILACLMAFVGANLSAEPKWYSKAYNKTNTQKGYLYGSGSATSKEASKQKALADLVASISVVVNSQIHIQKSRVDNK LKSSDSQTINLKTDDLELNNVEIVNQEVQKGIYYTRVRINQNLFLQGLRDKYNALYGQFSTLMPKVCKGVFLQQSKSMGD LLAKAMPIERILKAYSVPVGSLENYEKIYYQNAFKPKVQITFDNNGDAEIKSALISAYARVLTPSDEEKLYQIKNEVFTD SANGITRIRVVVSASDCQGTPVLNRSLEVDEKNKNFAITRLQSLLYKELKDYANKEGQGNTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33871; Mature: 33871
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILACLMAFVGANLSAEPKWYSKAYNKTNTQKGYLYGSGSATSKEASKQKALADLVA CHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH SISVVVNSQIHIQKSRVDNKLKSSDSQTINLKTDDLELNNVEIVNQEVQKGIYYTRVRIN HHHHHHCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEEEEC QNLFLQGLRDKYNALYGQFSTLMPKVCKGVFLQQSKSMGDLLAKAMPIERILKAYSVPVG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCC SLENYEKIYYQNAFKPKVQITFDNNGDAEIKSALISAYARVLTPSDEEKLYQIKNEVFTD CHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC SANGITRIRVVVSASDCQGTPVLNRSLEVDEKNKNFAITRLQSLLYKELKDYANKEGQGN CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC TGL CCC >Mature Secondary Structure MKKIILACLMAFVGANLSAEPKWYSKAYNKTNTQKGYLYGSGSATSKEASKQKALADLVA CHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH SISVVVNSQIHIQKSRVDNKLKSSDSQTINLKTDDLELNNVEIVNQEVQKGIYYTRVRIN HHHHHHCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEEEEC QNLFLQGLRDKYNALYGQFSTLMPKVCKGVFLQQSKSMGDLLAKAMPIERILKAYSVPVG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCC SLENYEKIYYQNAFKPKVQITFDNNGDAEIKSALISAYARVLTPSDEEKLYQIKNEVFTD CHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC SANGITRIRVVVSASDCQGTPVLNRSLEVDEKNKNFAITRLQSLLYKELKDYANKEGQGN CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC TGL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA