| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646036
GI number: 15646036
Start: 1496989
End: 1497171
Strand: Reverse
Name: Not Available
Synonym: HP1427
Alternate gene names: 15646036
Gene position: 1497171-1496989 (Counterclockwise)
Preceding gene: 15646037
Following gene: 15646035
Centisome position: 89.77
GC content: 53.55
Gene sequence:
>183_bases ATGGCACACCATGAAGAACAACACGGCGGGCACCACCACCACCATCACCACACACACCACCACCACTATCATGGCGGTGA ACACCACCATCACCACCACAGCTCTCATCATGAAGAAGGTTGTTGCAGCACTAGCGACAGTCATCATCAAGAAGAAGGTT GCTGCCACGGGCATCACGAGTAA
Upstream 100 bases:
>100_bases CACTAAATTTTCTTTCATTAACAATTAATTAGATTTTATATTGTAGAATGAAATCCTAGCCAGTGAGCTAGAATTTAAAT TTTTAATCAAAGGAGTCATC
Downstream 100 bases:
>100_bases TATCGGTGTGGCTAGGGGCAACTTGACTAGGGTTGTCTCTGGCTTTTGACTTTAAAATACAATCATTCCATTCTAACCCA TTCTGATCAAACCCGTTAAA
Product: histidine-rich, metal binding polypeptide (hpn)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MAHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE
Sequences:
>Translated_60_residues MAHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE >Mature_59_residues AHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE
Specific function: Strongly binds nickel and zinc. Binds other metals less strongly:cobalt > copper > cadmium > manganese. May act to increase, or at least to preserve, urease activity. Exact function is still unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HPN_HELPJ (P0A0V7)
Other databases:
- EMBL: AE001439 - PIR: C64698 - RefSeq: NP_224038.1 - GeneID: 889511 - GenomeReviews: AE001439_GR - KEGG: hpj:jhp1320 - HOGENOM: HBG099251 - OMA: DAHHHEP - ProtClustDB: CLSK477944 - BioCyc: HPYL85963:JHP1320-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7077; Mature: 6946
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682