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Identifier: 15646003

GI number: 15646003

Start: 1453376

End: 1454950

Strand: Reverse

Name: Not Available

Synonym: HP1393

Alternate gene names: 15646003

Gene position: 1454950-1453376 (Counterclockwise)

Preceding gene: 15646004

Following gene: 15646002

Centisome position: 87.23

GC content: 39.75

Gene sequence:

>1575_bases
ATGCGAGATTTCAATAACGCTCAAATCACACGCTTAAAAGTGCGTCAAAACGCTGTTTTTGAAAAATTGGATCTGGAGTT
TAAAGACGGCTTGAGCGCGATTAGTGGGGCTAGCGGGGTGGGAAAAAGCGTTCTTATTGCGAGTCTTTTAGGGGCGTTTG
GGCTTAAAGAGAGCAACGCTTCAAACATTGAAGTGGAATTGATTGCGCCTTTTTTAGACACTGAAGAATACGGCATTTTT
AGAGAAGATGAACATGAACCCTTAGTCATCAGCGTGATTAAAAAAGAAAAAACGCGCTATTTTTTAAACCAAACAAGCCT
GTCTAAAAACACGCTCAAAGCGTTATTAAAAGGTTTGATTAAACGCTTGTCTAACGATAGATTCAGCCAGAATGAACTCA
ACGATATTTTAATGCTCTCCTTACTGGATGGCTATATCCAAAACGAAAATAAGGCGTTTAGCCCCCTTTTAGGCGCGCTT
GAAGAAAAATTCACCCGATTAGAGAAGCTAGAAAAAGAAAGGCGATTGTTAGAGGATAAAAAGCGTTTCCAAAAGGATTT
AGAAGAACGATTGAATTTTGAAAAAATGAAATTAGAGAGGCTGGATTTAAAAGAAGATGAATACGAACGCCTTTTAGAGC
AAAAAAAATTGCTTTCTAGTAAGGAAAAACTGAACGATAAAATCGCTCTGGCGTTAGAGGTGCTAGAAAATACCCATAAA
ATCACGCATGCTTTAGAGAGCGTGGGCCATAGCGCGGAGTTTTTAAAAAGCGCTTTATTAGAAGCGAGCGCTCTATTGGA
AAAAGAGCAGGCTAAATTAGAAGAGTGCGAGCGTTTGGACATTGAAAAAGTTCTAGAAAGGCTTGGCATGCTAAGTGGGA
TCATTAAGGATTACGGGAGTATTATGCATGCTAAAGAACGATTAGGGCATGTTAAAAACGAATTGCACAACCTAAAAGAA
ATTGATAGTCATTGCGAAACTTACCACAAAGAAATAGAGCGATTAAAAACCGAATGCTTGAAATTGTGCGAAGAAATAAG
CGGCTTTAGAAAAGAGTATTTAGCCGGTTTTAACGCTCTTTTAAGCGCTAAAGCGAAAGATTTGCTCCTAAAAAGCCCCA
GTTTGGTTTTAGAAGACGCCCCCATGAGCGAAAAAGGCGCTCAAAAACTCGTTTTGAATTTGCAAAATTCCCAATTAGAA
ACCTTAAGCTCTGGAGAATACAGCCGTTTGAGACTGGCGTTCATGCTTTTAGAAATGGAATTTTTAAAGGATTTTAAAGG
CGTGTTGGTGTTAGATGAAATGGATTCCAATTTGAGCGGCGAAGAGAGTTTGGCGGTCTCTAAAGCCCTTGAAACCTTAA
GCAGCCATTCGCAAATCTTTGCCATTTCGCACCAAGTCCATATCCCAGCGCTCGCTAAAAACCATATTTTAGTCTTCAAA
GAAAACCACAAAAGCCTTGCCAAAACCCTTAATAACGAAGAAAGGGTTTTAGAAATCGCGCGCATGATAGGGGGGAGCGA
GAATATAGAGAGCGCGATTTCTTTCGCTAAGGAAAAATTAAAGGCGCAAGAATGA

Upstream 100 bases:

>100_bases
AGCTCTTACAAAAAAATTCAAGGGATTATTTTAAAGTGCTTAAAGAAAAGCTCTTATGGGGGGAAAGCCCTAGCAAAAAA
AGATAAAAAGGGTAAAAAAC

Downstream 100 bases:

>100_bases
AATTTTTTCTTTTAAAGAAATTCAGCGAATTTTTAAACGCTCAAACGCATTTTAGCCTCAAACGCTTGAACGCGTCTAGC
TTTTTATTAGAGACTTTTTC

Product: DNA repair protein (recN)

Products: NA

Alternate protein names: Recombination protein N

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNASNIEVELIAPFLDTEEYGIF
REDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLIKRLSNDRFSQNELNDILMLSLLDGYIQNENKAFSPLLGAL
EEKFTRLEKLEKERRLLEDKKRFQKDLEERLNFEKMKLERLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGIIKDYGSIMHAKERLGHVKNELHNLKE
IDSHCETYHKEIERLKTECLKLCEEISGFRKEYLAGFNALLSAKAKDLLLKSPSLVLEDAPMSEKGAQKLVLNLQNSQLE
TLSSGEYSRLRLAFMLLEMEFLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE

Sequences:

>Translated_524_residues
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNASNIEVELIAPFLDTEEYGIF
REDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLIKRLSNDRFSQNELNDILMLSLLDGYIQNENKAFSPLLGAL
EEKFTRLEKLEKERRLLEDKKRFQKDLEERLNFEKMKLERLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGIIKDYGSIMHAKERLGHVKNELHNLKE
IDSHCETYHKEIERLKTECLKLCEEISGFRKEYLAGFNALLSAKAKDLLLKSPSLVLEDAPMSEKGAQKLVLNLQNSQLE
TLSSGEYSRLRLAFMLLEMEFLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE
>Mature_524_residues
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNASNIEVELIAPFLDTEEYGIF
REDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLIKRLSNDRFSQNELNDILMLSLLDGYIQNENKAFSPLLGAL
EEKFTRLEKLEKERRLLEDKKRFQKDLEERLNFEKMKLERLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGIIKDYGSIMHAKERLGHVKNELHNLKE
IDSHCETYHKEIERLKTECLKLCEEISGFRKEYLAGFNALLSAKAKDLLLKSPSLVLEDAPMSEKGAQKLVLNLQNSQLE
TLSSGEYSRLRLAFMLLEMEFLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE

Specific function: May be involved in recombinational repair of damaged DNA

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family

Homologues:

Organism=Escherichia coli, GI48994901, Length=574, Percent_Identity=22.8222996515679, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECN_HELPY (O25943)

Other databases:

- EMBL:   AE000511
- PIR:   A64694
- RefSeq:   NP_208184.1
- ProteinModelPortal:   O25943
- SMR:   O25943
- DIP:   DIP-3217N
- MINT:   MINT-173060
- GeneID:   899903
- GenomeReviews:   AE000511_GR
- KEGG:   hpy:HP1393
- NMPDR:   fig|85962.1.peg.1380
- TIGR:   HP_1393
- HOGENOM:   HBG632212
- OMA:   QIFAISH
- ProtClustDB:   CLSK872577
- GO:   GO:0005694
- InterPro:   IPR003593
- InterPro:   IPR003395
- SMART:   SM00382

Pfam domain/function: PF02463 SMC_N

EC number: NA

Molecular weight: Translated: 59565; Mature: 59565

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNA
CCCCCCCCEEEEHHHHHHHHHHHCCHHHHCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
SNIEVELIAPFLDTEEYGIFREDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLI
CCEEEEEEECHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KRLSNDRFSQNELNDILMLSLLDGYIQNENKAFSPLLGALEEKFTRLEKLEKERRLLEDK
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRFQKDLEERLNFEKMKLERLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
HHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGIIKDYGS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IMHAKERLGHVKNELHNLKEIDSHCETYHKEIERLKTECLKLCEEISGFRKEYLAGFNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAKAKDLLLKSPSLVLEDAPMSEKGAQKLVLNLQNSQLETLSSGEYSRLRLAFMLLEME
HHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHH
FLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECEEECCCCCCCCEEEEE
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE
CCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNA
CCCCCCCCEEEEHHHHHHHHHHHCCHHHHCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
SNIEVELIAPFLDTEEYGIFREDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLI
CCEEEEEEECHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KRLSNDRFSQNELNDILMLSLLDGYIQNENKAFSPLLGALEEKFTRLEKLEKERRLLEDK
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRFQKDLEERLNFEKMKLERLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
HHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGIIKDYGS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IMHAKERLGHVKNELHNLKEIDSHCETYHKEIERLKTECLKLCEEISGFRKEYLAGFNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAKAKDLLLKSPSLVLEDAPMSEKGAQKLVLNLQNSQLETLSSGEYSRLRLAFMLLEME
HHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHH
FLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECEEECCCCCCCCEEEEE
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE
CCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9252185