| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646000
GI number: 15646000
Start: 1451004
End: 1451504
Strand: Reverse
Name: Not Available
Synonym: HP1390
Alternate gene names: NA
Gene position: 1451504-1451004 (Counterclockwise)
Preceding gene: 15646001
Following gene: 15645995
Centisome position: 87.03
GC content: 38.12
Gene sequence:
>501_bases ATGAGCGAACCATTAGAAACATTAGACAAGGATAAACAAGCTATGAGTGAAGCAATTAAAAAAGATATTGAAAAAGACAA AGAAAACCTCGCACGAGTCAAAGCAGACAAAAAAGTCAAAGCCGATGAAAGTGAAAAAGGCTACGAAAAAGACGATGACA AAAAAGCCGAGAATCTTGACAAAGAAATCGCTAAAGACAAAGCTAGCCCTAACGATAATGAGCTTTATGAAGAGGACGAT AGAGTTAAACGAGACAAAGAAAGAGACGATGCCTTGCGTGATAAAGAAAAAGCCAAAGATGACGCATGCATGGTAAGAGC GGACGATGACACCATAGAGGACGATGAGGAATATGGTGATGATGATAAGTTAAGAGACGAAATACTCGGTGTTATGGAGG AGTTATGCGATACCCTTAATGATAACCTTAACTTCAAAAAAGTCGTCTGTATGGGCGGTAAGGTTTCAATTGCGTTCAAA TTTCTAATTTTTTGCTCTTAA
Upstream 100 bases:
>100_bases TGACTTACTATTATATTTATGATATTGTAGAACCTATGTTAATGGAAGCTATAACTAACTTTAAAAGCATATAGAAAAGG CTTTTTAAAAGGACACACCA
Downstream 100 bases:
>100_bases TCTTTTAGAAAAAATTCAAACTCTAAGGATCTATCTTTTCGTTAGGGTTTAGAGCGATTTGGTTCATCGCATTCAAATGA AAAATTTTTTCCGTCAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSEPLETLDKDKQAMSEAIKKDIEKDKENLARVKADKKVKADESEKGYEKDDDKKAENLDKEIAKDKASPNDNELYEEDD RVKRDKERDDALRDKEKAKDDACMVRADDDTIEDDEEYGDDDKLRDEILGVMEELCDTLNDNLNFKKVVCMGGKVSIAFK FLIFCS
Sequences:
>Translated_166_residues MSEPLETLDKDKQAMSEAIKKDIEKDKENLARVKADKKVKADESEKGYEKDDDKKAENLDKEIAKDKASPNDNELYEEDD RVKRDKERDDALRDKEKAKDDACMVRADDDTIEDDEEYGDDDKLRDEILGVMEELCDTLNDNLNFKKVVCMGGKVSIAFK FLIFCS >Mature_165_residues SEPLETLDKDKQAMSEAIKKDIEKDKENLARVKADKKVKADESEKGYEKDDDKKAENLDKEIAKDKASPNDNELYEEDDR VKRDKERDDALRDKEKAKDDACMVRADDDTIEDDEEYGDDDKLRDEILGVMEELCDTLNDNLNFKKVVCMGGKVSIAFKF LIFCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19097; Mature: 18966
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLETLDKDKQAMSEAIKKDIEKDKENLARVKADKKVKADESEKGYEKDDDKKAENLD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH KEIAKDKASPNDNELYEEDDRVKRDKERDDALRDKEKAKDDACMVRADDDTIEDDEEYGD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHCCC DDKLRDEILGVMEELCDTLNDNLNFKKVVCMGGKVSIAFKFLIFCS HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure SEPLETLDKDKQAMSEAIKKDIEKDKENLARVKADKKVKADESEKGYEKDDDKKAENLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH KEIAKDKASPNDNELYEEDDRVKRDKERDDALRDKEKAKDDACMVRADDDTIEDDEEYGD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHCCC DDKLRDEILGVMEELCDTLNDNLNFKKVVCMGGKVSIAFKFLIFCS HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA