| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645983
GI number: 15645983
Start: 1437001
End: 1438044
Strand: Reverse
Name: Not Available
Synonym: HP1373
Alternate gene names: 15645983
Gene position: 1438044-1437001 (Counterclockwise)
Preceding gene: 15645984
Following gene: 15645982
Centisome position: 86.22
GC content: 46.36
Gene sequence:
>1044_bases ATGATTTTTAGCAAATTGATCGGTTTGTTTTCGCATGATATTGCCATAGATTTAGGCACGGCTAACACGATCGTGTTAGT CAAAGGGCAGGGCATTATTATCAATGAGCCTTCTATTGTGGCGGTGCGCATGGGATTGTTTGATTCTAAAGCTTATGATA TTTTGGCAGTGGGGAGCGAGGCTAAAGAAATGCTAGGCAAAACCCCTAACAGCATCAGAGCGATTCGCCCCATGAAAGAT GGCGTGATCGCCGATTATGACATTACCGCTAAAATGATCCGCTACTTTATTGAAAAAGTGCACAAACGAAAAACATGGAT CCGCCCGCGCATCATGGTGTGCGTGCCCTATGGATTAACAAGCGTGGAAAGGAATGCGGTTAAAGAGAGCACTTTAAGCG CGGGGGCTAGAGAAGTCTTTTTGATTGAAGAGCCTATGGCAGCAGCGATTGGAGCAGGCTTGCCAGTCAAAGAGCCTCAA GGGAGTTTGATCGTGGATATTGGCGGAGGCACGACTGAAATTGGCGTGATCAGTCTTGGGGGGCTAGTCATTTCTAAAAG CATTAGAGTGGCTGGGGATAAATTGGATCAAAGCATCGTGGAATACATCCGCAAGAAATTCAATCTGTTGATAGGCGAGC GCACCGGTGAAGAGATTAAGATTGAAATCGGTTGCGCGATCAAATTGGATCCGCCTCTTACCATGGAAGTGTCAGGGAGG GATCAAGTGAGTGGGCTGTTGCACACGATTGAATTGAGCTCTGATGATGTGTTTGAAGCCATTAAAGATCAGGTGAGAGA AATTTCTAGCGCTTTAAGGAGCGTGCTTGAAGAAGTGAAGCCGGATTTGGCTAAAGACATTGTGCAAAATGGCGTGGTGC TTACCGGCGGTGGGGCTTTGATTAAAGGCTTAGACAAGTATTTGAGCGATATGGTTAAACTCCCTGTGTATGTGGGCGAT GAGCCTTTATTGGCCGTGGCCAAAGGCACAGGAGAAGCCATACAAGATTTGGATTTACTCAGCCGTGTGGGTTTTAGTGA ATAA
Upstream 100 bases:
>100_bases TTTAAAACAGGCTGAACCTTTGATCATTGCTAAAACGCATTCTAAAATTCTTCCTTAAGGAACACGCTTATAAATTTAAC GATAAAGGATTAGAAAGGGC
Downstream 100 bases:
>100_bases TGCATGCGTTTTTATTTTAAATTCCTTTGGCTTTTAGGGATTTTTCTTATTTTTTATTTTTTAGATTTTAAGGGTAGTTC TTCTTATATCAGCGACAGGA
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKD GVIADYDITAKMIRYFIEKVHKRKTWIRPRIMVCVPYGLTSVERNAVKESTLSAGAREVFLIEEPMAAAIGAGLPVKEPQ GSLIVDIGGGTTEIGVISLGGLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGD EPLLAVAKGTGEAIQDLDLLSRVGFSE
Sequences:
>Translated_347_residues MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKD GVIADYDITAKMIRYFIEKVHKRKTWIRPRIMVCVPYGLTSVERNAVKESTLSAGAREVFLIEEPMAAAIGAGLPVKEPQ GSLIVDIGGGTTEIGVISLGGLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGD EPLLAVAKGTGEAIQDLDLLSRVGFSE >Mature_347_residues MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKD GVIADYDITAKMIRYFIEKVHKRKTWIRPRIMVCVPYGLTSVERNAVKESTLSAGAREVFLIEEPMAAAIGAGLPVKEPQ GSLIVDIGGGTTEIGVISLGGLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGD EPLLAVAKGTGEAIQDLDLLSRVGFSE
Specific function: Involved in formation of the rod shape of the cell. May act as a negative regulator of ftsI [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI87082236, Length=348, Percent_Identity=51.7241379310345, Blast_Score=357, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001023 - InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 37398; Mature: 37398
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSE CHHHHHHHHHHCCEEEEECCCCEEEEEECCEEEEECCCEEEEEECCCCCCCEEEEEECHH AKEMLGKTPNSIRAIRPMKDGVIADYDITAKMIRYFIEKVHKRKTWIRPRIMVCVPYGLT HHHHHCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC SVERNAVKESTLSAGAREVFLIEEPMAAAIGAGLPVKEPQGSLIVDIGGGTTEIGVISLG HHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEC GLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR CCCEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEEECCCEEEEECCC DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGAL HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEEECCHHH IKGLDKYLSDMVKLPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE HHHHHHHHHHHHHCCEEECCCCEEEEECCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSE CHHHHHHHHHHCCEEEEECCCCEEEEEECCEEEEECCCEEEEEECCCCCCCEEEEEECHH AKEMLGKTPNSIRAIRPMKDGVIADYDITAKMIRYFIEKVHKRKTWIRPRIMVCVPYGLT HHHHHCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC SVERNAVKESTLSAGAREVFLIEEPMAAAIGAGLPVKEPQGSLIVDIGGGTTEIGVISLG HHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEC GLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR CCCEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEEECCCEEEEECCC DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGAL HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEEECCHHH IKGLDKYLSDMVKLPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE HHHHHHHHHHHHHCCEEECCCCEEEEECCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]