| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15645968
GI number: 15645968
Start: 1417889
End: 1418899
Strand: Reverse
Name: Not Available
Synonym: HP1356
Alternate gene names: 15645968
Gene position: 1418899-1417889 (Counterclockwise)
Preceding gene: 15645969
Following gene: 15645967
Centisome position: 85.07
GC content: 39.96
Gene sequence:
>1011_bases ATGCCAACTGATAACGATTTAAAAGCTGCTATTTTGGAATTATTGCGCGATTTGGACGTGCTTTTAGTGGCTCATTTTTA CCAAAAAGATGAGATTGTAGAGTTAGCCCATTATACAGGCGATAGCCTGGAGTTAGCTAAAATCGCAAGCCAAAGCGATA AAAACCTCATCGTGTTTTGCGGGGTGCATTTTATGGGCGAGAGCGTGAAAGCCCTAGCCTTTGACAAACAAGTGATCATG CCCAAACTCTCATGCTGTTCTATGGCGAGGATGATTGATAGCCATTATTACGATAGAAGCGTTCATTTATTAAAAGAATG CGGCGTTAAAGAATTTTACCCCATCACTTATATCAATTCTAACGCTGAAGTGAAAGCCAAAGTCGCTAAAGATGATGGCG TGGTTTGCACGAGCCGCAACGCTTCTAAGATCTTTAATCACGCTTTAAAACAAAATAAAAAAATCTTTTTTTTACCGGAT AAATGCTTGGGGGAAAATCTTGCCCTAGAAAATGGCTTAAAAAGCGCGATTTTAGGTGCAAATAGCCAAGAAGAAATCAA AAACGCTGATGTGGTTTGTTATAACGGCTTTTGTTCGGTGCATCAGCTTTTCAAATTAGAAGATATTGAATTTTACCGCC AAAAATACCCGGATATTTTAATCGCTGTCCATCCAGAGTGCGAGCCTAGCGTGGTTTCTAACGCTGATTTTAGCGGATCA ACGAGTCAAATCATAGAATTTGTAGAAAAGCTAAGCCCTAATCAAAAAGTCGCCATAGGCACTGAAAGCCATTTAGTCAA CCGCTTGAAAGCCAAGCGCCACCATCAAAACACTTTCATTCTTTCTAGCACGCTCGCCCTTTGCCCTACCATGAATGAAA CGACTTTAAAAGATTTGTTTGAAGTCTTAAAGGCTTACAAAAACCACAGGGCTTACAATACGATTGAATTAAAAGATGAG GTGGCGCGTTTGGCCAAACTCGCTTTAACTAAAATGATGGAGTTATCTTAA
Upstream 100 bases:
>100_bases TTTGAAATGGGCTCTACTATCGTTTTATTCATTCAAAACACCGCTTTTAAAGATTTGAAAGAAAAAAACGTGAAGTTTGG GGAAAGTATAGGGGAATTTC
Downstream 100 bases:
>100_bases TGGAGATTAGAACCTTTTTAGAACGCGCTTTAAAAGAAGATTTAGGGCATGGGGATTTGTTTGAAAGGGTGTTAGAAAAA GATTTTAAGGCCACAGCGTT
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MPTDNDLKAAILELLRDLDVLLVAHFYQKDEIVELAHYTGDSLELAKIASQSDKNLIVFCGVHFMGESVKALAFDKQVIM PKLSCCSMARMIDSHYYDRSVHLLKECGVKEFYPITYINSNAEVKAKVAKDDGVVCTSRNASKIFNHALKQNKKIFFLPD KCLGENLALENGLKSAILGANSQEEIKNADVVCYNGFCSVHQLFKLEDIEFYRQKYPDILIAVHPECEPSVVSNADFSGS TSQIIEFVEKLSPNQKVAIGTESHLVNRLKAKRHHQNTFILSSTLALCPTMNETTLKDLFEVLKAYKNHRAYNTIELKDE VARLAKLALTKMMELS
Sequences:
>Translated_336_residues MPTDNDLKAAILELLRDLDVLLVAHFYQKDEIVELAHYTGDSLELAKIASQSDKNLIVFCGVHFMGESVKALAFDKQVIM PKLSCCSMARMIDSHYYDRSVHLLKECGVKEFYPITYINSNAEVKAKVAKDDGVVCTSRNASKIFNHALKQNKKIFFLPD KCLGENLALENGLKSAILGANSQEEIKNADVVCYNGFCSVHQLFKLEDIEFYRQKYPDILIAVHPECEPSVVSNADFSGS TSQIIEFVEKLSPNQKVAIGTESHLVNRLKAKRHHQNTFILSSTLALCPTMNETTLKDLFEVLKAYKNHRAYNTIELKDE VARLAKLALTKMMELS >Mature_335_residues PTDNDLKAAILELLRDLDVLLVAHFYQKDEIVELAHYTGDSLELAKIASQSDKNLIVFCGVHFMGESVKALAFDKQVIMP KLSCCSMARMIDSHYYDRSVHLLKECGVKEFYPITYINSNAEVKAKVAKDDGVVCTSRNASKIFNHALKQNKKIFFLPDK CLGENLALENGLKSAILGANSQEEIKNADVVCYNGFCSVHQLFKLEDIEFYRQKYPDILIAVHPECEPSVVSNADFSGST SQIIEFVEKLSPNQKVAIGTESHLVNRLKAKRHHQNTFILSSTLALCPTMNETTLKDLFEVLKAYKNHRAYNTIELKDEV ARLAKLALTKMMELS
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 3 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=350, Percent_Identity=28.8571428571429, Blast_Score=131, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 37813; Mature: 37682
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDNDLKAAILELLRDLDVLLVAHFYQKDEIVELAHYTGDSLELAKIASQSDKNLIVFC CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEE GVHFMGESVKALAFDKQVIMPKLSCCSMARMIDSHYYDRSVHLLKECGVKEFYPITYINS CHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NAEVKAKVAKDDGVVCTSRNASKIFNHALKQNKKIFFLPDKCLGENLALENGLKSAILGA CCEEEEEEECCCCEEEECCCHHHHHHHHHHCCCEEEEECHHHCCCCHHHHHCHHHHHCCC NSQEEIKNADVVCYNGFCSVHQLFKLEDIEFYRQKYPDILIAVHPECEPSVVSNADFSGS CCHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC TSQIIEFVEKLSPNQKVAIGTESHLVNRLKAKRHHQNTFILSSTLALCPTMNETTLKDLF HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHH EVLKAYKNHRAYNTIELKDEVARLAKLALTKMMELS HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTDNDLKAAILELLRDLDVLLVAHFYQKDEIVELAHYTGDSLELAKIASQSDKNLIVFC CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEE GVHFMGESVKALAFDKQVIMPKLSCCSMARMIDSHYYDRSVHLLKECGVKEFYPITYINS CHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NAEVKAKVAKDDGVVCTSRNASKIFNHALKQNKKIFFLPDKCLGENLALENGLKSAILGA CCEEEEEEECCCCEEEECCCHHHHHHHHHHCCCEEEEECHHHCCCCHHHHHCHHHHHCCC NSQEEIKNADVVCYNGFCSVHQLFKLEDIEFYRQKYPDILIAVHPECEPSVVSNADFSGS CCHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC TSQIIEFVEKLSPNQKVAIGTESHLVNRLKAKRHHQNTFILSSTLALCPTMNETTLKDLF HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHH EVLKAYKNHRAYNTIELKDEVARLAKLALTKMMELS HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA