| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645966
GI number: 15645966
Start: 1414536
End: 1417043
Strand: Reverse
Name: Not Available
Synonym: HP1354
Alternate gene names: NA
Gene position: 1417043-1414536 (Counterclockwise)
Preceding gene: 15645967
Following gene: 15646203
Centisome position: 84.96
GC content: 38.12
Gene sequence:
>2508_bases ATGCTAAAAGAATATTTAGAAAGCATTAAAGATCTTACGCCTGAAAAGAATGAACTCACGCACCGCCCTTCTTTATACAA CTTGCTTAATCAGTTAAAAAACCATTTCAATAAAGAGTTTAAGATTGAACATGAGCCTGAAAGAAAGCAAGGAAGCCAGC CTGATTTTCGCGTTTCTTATCAAGGGATAAACATCGGCTATATAGAAAATAAAAGAGCAGGGACCAATCTTAGCCAGCTT TTAAAAAGCGAAAAAAGCGATCAAATCCTTAAATACTTAGAATTAAACCCTAACCTCATGCTCACCGATTACCTTAATTT CATGTGGGTAGGGAAAGATGAAAATAATGAGCCTTTAATCAAAAAAGAAATCTCTGTCGCCAGCCTTGATGAACTCTCTA AACCCCTAAAACCCAATCCGCAAACCGAGCGCGATTTGATTGAATTGTTCAAAAGCTTTTTCAACCACGAAGCAGCCCCT ATTACTAACGCTAAAGATTTTGCCACGCATTTAAGCCCGCGCACCAAGTATTTAAAAGACGCTTTAATCAAATACCAAGA AAAAGCGCAAGTTTCTAGCATTTTTAACAACTTTAAAGAATATCTTTATGAAGAATTGAGCTTTGAAGACTTTAGCGATG CGCTCGCTCAAACGCTCACCTACAGCCTTTTTCTAGCCAAGCTCAACCACCCTTCTGAAAAAATTAATTTGGATAATGTG AGGAGTTTGATCCCTAAAAATTTCGCTGTGATCAGAGAAATGGCGGATTTTTTAAAGAAACTTGATGAAATAAAAGAAAT CCAATGGCTTTTAAATGAAATCTTAAGCTCGATAAATCATGTTGATATGGATTCTATCCTTAAAGATTTGAATGACGATA AAGACCCTTATTTGCACTTTTATGAAACCTTTTTAAGCACTTATGACCCTAAATTACGAGAGAGTAAGGGCGTGTATTAC ACTCCAGATTCTGTGGTGAAATTCATCATTAACGCTTTGGATAGTTTGCTTAAAACGCATTTCAAAGACGCTCCCTTAGG CTTAAAAAGCGCTTTGGATAACGAAAACATCAAGCTCTTAGATTTTGCCACCGGCACAGGCACTTTTTTATTAGAAGCGT TCAGGAAAGCCCTAGAAACGAGAAAGACAAGCGATGGAGGCACCTCCACTAAAGAGGACAAATATCAAAATCTCTTGAAG CAATTCTATGGGTTTGAATACTTAATCGCTCCTTATGCGATCGCTCATTTGAACCTCAGCCAAGCCTTTAAGGAGGAATT TAAAAAGCCTCTCAAAGAAAACGATGCGCTTCAAATCATTTTAACCAACACCCTCATACAGCCTAGTGAAATCATCGCTT ATCGTGGGTTAAGCCCGATTTTTGAAAAAGAACTTTCAAACGCTCAAGAAATCAAAAAAAATGAAAACATCCTTATCATC ACCGGTAATCCCCCTTATAGCGGGGCGAGCGAGAATAAGGGCTTGTTTGAATGGGAAGTGAAAGCCACTTACGGCATAGA TCCCAAATTTCAAACCATAGAAATTGAAAAAAATGTTAAACTTGCCGATAAAATCCAAACGCTTTTAAGCAGCGTTCAAA TCCAAAAGCAAAGCGGCAGCAAAAACGATCTAAAGAAACTTAAAAGCCTCCATTCCAAATACAAACTACAAGATGAGAAA AACCCTAAATGGCTCCTAGACGATTATGTGAAATTCATGCGTTTCGCTCAAAACAAGATCGAATCATTAGGGCATGGCCT TTTTGGCTTTATCTCTAACAACGCCTTTTTAGACAACCCTACTTTTAGGGGGTTAAGGCGCTCTCTTTTAGAATGCTACG ATGAGCTTTATATCCTAAACTTGCATGGAAATGCGAGGAAAAAGGAGAAAACCCCACAAGGCGCAAAAGACGAAAATGTT TTCAATATCAAACAAGGCGTGTCCATTAACCTCTTTGTCAAAAACCCGCAAGTAGTAAAGCAAAAAATCCACTATTATGA TGTTTATGGCCAAAGGACTGAAAAATACGCCTTTTTAGCCCAAAACGATTTGAATAGCATTGAATGGCTTGAGATTGCCC CAAGAGGGCCTTTTTACTTGCTGTTGCCTTTAGAAACGCCCTTGTTAGATGAATACGAACAAGGGTTTAGCGTTCAAGAG ATGTTTCAAATTGGAAGCACCGGTATTTGTTCGCAACGAGACCATGTCGTTTTCCACAAGGACAAAGAAAGCTTGCTAAA GCTTTTAAAAGATTTTTCAACCTTAGAACCCAGTGAATTACGCAGAATTTATAATATTAAAAAAGATGGTAGGGATTGGC GTTTAGAATATGCCATTAAAGATGTTAAGGCAAACGCTAACAATTTAGAAGAATACATTGTTTCGTGCCAATACCGCCCC TTTGATTTTTACTACACTTATTATACCGGTAAATCAAAGTCTTTTATCGCTTATCCACGAGGCGAAGTTTTTAAGCACAT GTTACCCCCCCCCCCCAACAAACCCTAA
Upstream 100 bases:
>100_bases CGGCGTGGATGCCATTAGCGTAGGGGCTTTAATCCATCAAGCCACTTTTATTGACATGCACATGAAAATGGCTTAAAGAC TTTAAAAAGGGGTTATTAAC
Downstream 100 bases:
>100_bases AACACCCAATCAAACGCGCAAAAATGTTGCGCTAAACACCCCACGACAGCTAAAAAATAACGATAAAAGTTGGACGCAAT GCTTTATAAGCTCTCATATT
Product: adenine specific DNA methyltransferase
Products: NA
Alternate protein names: Helicase/Methyltransferase; DNA Methyltransferase; Superfamily II DNA/RNA Helicase; N-6 DNA Methylase; Type III Restriction Res Subunit; D12 Class N6 Adenine-Specific DNA Methyltransferase; Type III Restriction Protein Res Subunit; Helicase; N-6 DNA Methylase Family; II DNA/RNA Helicase; Helicase-Like Protein; Site-Specific DNA-Methyltransferase; Endonuclease And Methylase LlaGI; Restriction- System LlaBIII; Helicase Domain-Containing Protein
Number of amino acids: Translated: 835; Mature: 835
Protein sequence:
>835_residues MLKEYLESIKDLTPEKNELTHRPSLYNLLNQLKNHFNKEFKIEHEPERKQGSQPDFRVSYQGINIGYIENKRAGTNLSQL LKSEKSDQILKYLELNPNLMLTDYLNFMWVGKDENNEPLIKKEISVASLDELSKPLKPNPQTERDLIELFKSFFNHEAAP ITNAKDFATHLSPRTKYLKDALIKYQEKAQVSSIFNNFKEYLYEELSFEDFSDALAQTLTYSLFLAKLNHPSEKINLDNV RSLIPKNFAVIREMADFLKKLDEIKEIQWLLNEILSSINHVDMDSILKDLNDDKDPYLHFYETFLSTYDPKLRESKGVYY TPDSVVKFIINALDSLLKTHFKDAPLGLKSALDNENIKLLDFATGTGTFLLEAFRKALETRKTSDGGTSTKEDKYQNLLK QFYGFEYLIAPYAIAHLNLSQAFKEEFKKPLKENDALQIILTNTLIQPSEIIAYRGLSPIFEKELSNAQEIKKNENILII TGNPPYSGASENKGLFEWEVKATYGIDPKFQTIEIEKNVKLADKIQTLLSSVQIQKQSGSKNDLKKLKSLHSKYKLQDEK NPKWLLDDYVKFMRFAQNKIESLGHGLFGFISNNAFLDNPTFRGLRRSLLECYDELYILNLHGNARKKEKTPQGAKDENV FNIKQGVSINLFVKNPQVVKQKIHYYDVYGQRTEKYAFLAQNDLNSIEWLEIAPRGPFYLLLPLETPLLDEYEQGFSVQE MFQIGSTGICSQRDHVVFHKDKESLLKLLKDFSTLEPSELRRIYNIKKDGRDWRLEYAIKDVKANANNLEEYIVSCQYRP FDFYYTYYTGKSKSFIAYPRGEVFKHMLPPPPNKP
Sequences:
>Translated_835_residues MLKEYLESIKDLTPEKNELTHRPSLYNLLNQLKNHFNKEFKIEHEPERKQGSQPDFRVSYQGINIGYIENKRAGTNLSQL LKSEKSDQILKYLELNPNLMLTDYLNFMWVGKDENNEPLIKKEISVASLDELSKPLKPNPQTERDLIELFKSFFNHEAAP ITNAKDFATHLSPRTKYLKDALIKYQEKAQVSSIFNNFKEYLYEELSFEDFSDALAQTLTYSLFLAKLNHPSEKINLDNV RSLIPKNFAVIREMADFLKKLDEIKEIQWLLNEILSSINHVDMDSILKDLNDDKDPYLHFYETFLSTYDPKLRESKGVYY TPDSVVKFIINALDSLLKTHFKDAPLGLKSALDNENIKLLDFATGTGTFLLEAFRKALETRKTSDGGTSTKEDKYQNLLK QFYGFEYLIAPYAIAHLNLSQAFKEEFKKPLKENDALQIILTNTLIQPSEIIAYRGLSPIFEKELSNAQEIKKNENILII TGNPPYSGASENKGLFEWEVKATYGIDPKFQTIEIEKNVKLADKIQTLLSSVQIQKQSGSKNDLKKLKSLHSKYKLQDEK NPKWLLDDYVKFMRFAQNKIESLGHGLFGFISNNAFLDNPTFRGLRRSLLECYDELYILNLHGNARKKEKTPQGAKDENV FNIKQGVSINLFVKNPQVVKQKIHYYDVYGQRTEKYAFLAQNDLNSIEWLEIAPRGPFYLLLPLETPLLDEYEQGFSVQE MFQIGSTGICSQRDHVVFHKDKESLLKLLKDFSTLEPSELRRIYNIKKDGRDWRLEYAIKDVKANANNLEEYIVSCQYRP FDFYYTYYTGKSKSFIAYPRGEVFKHMLPPPPNKP >Mature_835_residues MLKEYLESIKDLTPEKNELTHRPSLYNLLNQLKNHFNKEFKIEHEPERKQGSQPDFRVSYQGINIGYIENKRAGTNLSQL LKSEKSDQILKYLELNPNLMLTDYLNFMWVGKDENNEPLIKKEISVASLDELSKPLKPNPQTERDLIELFKSFFNHEAAP ITNAKDFATHLSPRTKYLKDALIKYQEKAQVSSIFNNFKEYLYEELSFEDFSDALAQTLTYSLFLAKLNHPSEKINLDNV RSLIPKNFAVIREMADFLKKLDEIKEIQWLLNEILSSINHVDMDSILKDLNDDKDPYLHFYETFLSTYDPKLRESKGVYY TPDSVVKFIINALDSLLKTHFKDAPLGLKSALDNENIKLLDFATGTGTFLLEAFRKALETRKTSDGGTSTKEDKYQNLLK QFYGFEYLIAPYAIAHLNLSQAFKEEFKKPLKENDALQIILTNTLIQPSEIIAYRGLSPIFEKELSNAQEIKKNENILII TGNPPYSGASENKGLFEWEVKATYGIDPKFQTIEIEKNVKLADKIQTLLSSVQIQKQSGSKNDLKKLKSLHSKYKLQDEK NPKWLLDDYVKFMRFAQNKIESLGHGLFGFISNNAFLDNPTFRGLRRSLLECYDELYILNLHGNARKKEKTPQGAKDENV FNIKQGVSINLFVKNPQVVKQKIHYYDVYGQRTEKYAFLAQNDLNSIEWLEIAPRGPFYLLLPLETPLLDEYEQGFSVQE MFQIGSTGICSQRDHVVFHKDKESLLKLLKDFSTLEPSELRRIYNIKKDGRDWRLEYAIKDVKANANNLEEYIVSCQYRP FDFYYTYYTGKSKSFIAYPRGEVFKHMLPPPPNKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96965; Mature: 96965
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKEYLESIKDLTPEKNELTHRPSLYNLLNQLKNHFNKEFKIEHEPERKQGSQPDFRVSY CHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHCCCCEECCCCCHHCCCCCCCEEEEE QGINIGYIENKRAGTNLSQLLKSEKSDQILKYLELNPNLMLTDYLNFMWVGKDENNEPLI ECEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCHH KKEISVASLDELSKPLKPNPQTERDLIELFKSFFNHEAAPITNAKDFATHLSPRTKYLKD HHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHH ALIKYQEKAQVSSIFNNFKEYLYEELSFEDFSDALAQTLTYSLFLAKLNHPSEKINLDNV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHH RSLIPKNFAVIREMADFLKKLDEIKEIQWLLNEILSSINHVDMDSILKDLNDDKDPYLHF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHH YETFLSTYDPKLRESKGVYYTPDSVVKFIINALDSLLKTHFKDAPLGLKSALDNENIKLL HHHHHHHCCCCHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEE DFATGTGTFLLEAFRKALETRKTSDGGTSTKEDKYQNLLKQFYGFEYLIAPYAIAHLNLS EECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH QAFKEEFKKPLKENDALQIILTNTLIQPSEIIAYRGLSPIFEKELSNAQEIKKNENILII HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHCCHHHHHCCCCEEEE TGNPPYSGASENKGLFEWEVKATYGIDPKFQTIEIEKNVKLADKIQTLLSSVQIQKQSGS ECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC KNDLKKLKSLHSKYKLQDEKNPKWLLDDYVKFMRFAQNKIESLGHGLFGFISNNAFLDNP HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEECCC TFRGLRRSLLECYDELYILNLHGNARKKEKTPQGAKDENVFNIKQGVSINLFVKNPQVVK HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCHHHHH QKIHYYDVYGQRTEKYAFLAQNDLNSIEWLEIAPRGPFYLLLPLETPLLDEYEQGFSVQE HHHHHHHHCCCCCHHEEEEECCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHCCCCHHH MFQIGSTGICSQRDHVVFHKDKESLLKLLKDFSTLEPSELRRIYNIKKDGRDWRLEYAIK HHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHH DVKANANNLEEYIVSCQYRPFDFYYTYYTGKSKSFIAYPRGEVFKHMLPPPPNKP HHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCCHHHHHHCCCCCCCCC >Mature Secondary Structure MLKEYLESIKDLTPEKNELTHRPSLYNLLNQLKNHFNKEFKIEHEPERKQGSQPDFRVSY CHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHCCCCEECCCCCHHCCCCCCCEEEEE QGINIGYIENKRAGTNLSQLLKSEKSDQILKYLELNPNLMLTDYLNFMWVGKDENNEPLI ECEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCHH KKEISVASLDELSKPLKPNPQTERDLIELFKSFFNHEAAPITNAKDFATHLSPRTKYLKD HHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHH ALIKYQEKAQVSSIFNNFKEYLYEELSFEDFSDALAQTLTYSLFLAKLNHPSEKINLDNV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHH RSLIPKNFAVIREMADFLKKLDEIKEIQWLLNEILSSINHVDMDSILKDLNDDKDPYLHF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHH YETFLSTYDPKLRESKGVYYTPDSVVKFIINALDSLLKTHFKDAPLGLKSALDNENIKLL HHHHHHHCCCCHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEE DFATGTGTFLLEAFRKALETRKTSDGGTSTKEDKYQNLLKQFYGFEYLIAPYAIAHLNLS EECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH QAFKEEFKKPLKENDALQIILTNTLIQPSEIIAYRGLSPIFEKELSNAQEIKKNENILII HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHCCHHHHHCCCCEEEE TGNPPYSGASENKGLFEWEVKATYGIDPKFQTIEIEKNVKLADKIQTLLSSVQIQKQSGS ECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC KNDLKKLKSLHSKYKLQDEKNPKWLLDDYVKFMRFAQNKIESLGHGLFGFISNNAFLDNP HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEECCC TFRGLRRSLLECYDELYILNLHGNARKKEKTPQGAKDENVFNIKQGVSINLFVKNPQVVK HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCHHHHH QKIHYYDVYGQRTEKYAFLAQNDLNSIEWLEIAPRGPFYLLLPLETPLLDEYEQGFSVQE HHHHHHHHCCCCCHHEEEEECCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHCCCCHHH MFQIGSTGICSQRDHVVFHKDKESLLKLLKDFSTLEPSELRRIYNIKKDGRDWRLEYAIK HHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHH DVKANANNLEEYIVSCQYRPFDFYYTYYTGKSKSFIAYPRGEVFKHMLPPPPNKP HHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA