| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645964
GI number: 15645964
Start: 1411346
End: 1412218
Strand: Reverse
Name: Not Available
Synonym: HP1351
Alternate gene names: NA
Gene position: 1412218-1411346 (Counterclockwise)
Preceding gene: 15645965
Following gene: 15645963
Centisome position: 84.67
GC content: 30.81
Gene sequence:
>873_bases ATGGACTATCAAACCTTTAACGAGATTTTTAATCGTTTTGTCTTTGGAACATCTAAAGCGAAATTACTTGAAAATATTGC CGAAAATCCTGAACGCTATTTGGGGATTTTTAGACCCACTAAGCCTAAAACAAAATTATTACAAAATTTATTGACTTCCC ATGAGATTAAGTTTGGCGATGCGTTTGAATACTTAATAGAACAATACTTAAAAGAGCATAACTTTTCACCTTTATCTAAA AAAATCCCTTATTACAATAAGAATAAAGAAAAAAGGGAATCTTTAGAATTAGATCAGTTGGCTAAAAAAGATAACACCTA TTATTTTATAGAACAAAAAATGCGAGACGACCATGACAGCGCCAAAAAGAGAGGGCAAATAGATAACTTTGAAAGGAAAT TAGAGGCTTTAATCCATCGTTATGGCGAAAACATTCAAGGCTATTTTTACTTTATAGATGAGAGTTTGAACAAAAATCAA AATTATTATAAAGAAGAATTGCAAAAATTATCTGTTGGTTATGGCGTGCCTTTGAGATTGTGTTATGGTAAGGAGTTGTT TGAAAATCTTAATATCTTGCAAGTTTGGGATGAGGTTTTAAACCATTTAGCACGATGGCGTGAAATTTTACCTGATTTGC CCAGTTTGAATTTTGATGAAAATCCTTTAGAAAGCTTTAGAGAAATCAAAGATTTAGCGCCAAGCGTTTATAGAAAACTT TTGGATAATGATGAAATTTTCAATCTTGTGTTAATTTTATTCCCAGAACAAAAAGCTTTAAAAATGTTAGCAGAGCATTT TAAACGACAAAATAAAACGATTTATCAGCAATTAGCGTCAAAGTTAGAAGAAAAGTTATTGTCTTTGCGATAG
Upstream 100 bases:
>100_bases ATAAAACCAACCATAATGGCTGGAAATTTTTTTATGCGTATTACCAAAATCAATTTTTATTGCTAGATGAATTGCGTTAT ATCTGCCAAAAGGACTCTTA
Downstream 100 bases:
>100_bases AGGCTCTAAAGTAAGCCCCATTTCTAATGTTTTTGTAACGGGCATGCTTTGCGATTTGCATGTGAATGGATCGGGGAGTT ACGCGTTTTTGTTGTATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MDYQTFNEIFNRFVFGTSKAKLLENIAENPERYLGIFRPTKPKTKLLQNLLTSHEIKFGDAFEYLIEQYLKEHNFSPLSK KIPYYNKNKEKRESLELDQLAKKDNTYYFIEQKMRDDHDSAKKRGQIDNFERKLEALIHRYGENIQGYFYFIDESLNKNQ NYYKEELQKLSVGYGVPLRLCYGKELFENLNILQVWDEVLNHLARWREILPDLPSLNFDENPLESFREIKDLAPSVYRKL LDNDEIFNLVLILFPEQKALKMLAEHFKRQNKTIYQQLASKLEEKLLSLR
Sequences:
>Translated_290_residues MDYQTFNEIFNRFVFGTSKAKLLENIAENPERYLGIFRPTKPKTKLLQNLLTSHEIKFGDAFEYLIEQYLKEHNFSPLSK KIPYYNKNKEKRESLELDQLAKKDNTYYFIEQKMRDDHDSAKKRGQIDNFERKLEALIHRYGENIQGYFYFIDESLNKNQ NYYKEELQKLSVGYGVPLRLCYGKELFENLNILQVWDEVLNHLARWREILPDLPSLNFDENPLESFREIKDLAPSVYRKL LDNDEIFNLVLILFPEQKALKMLAEHFKRQNKTIYQQLASKLEEKLLSLR >Mature_290_residues MDYQTFNEIFNRFVFGTSKAKLLENIAENPERYLGIFRPTKPKTKLLQNLLTSHEIKFGDAFEYLIEQYLKEHNFSPLSK KIPYYNKNKEKRESLELDQLAKKDNTYYFIEQKMRDDHDSAKKRGQIDNFERKLEALIHRYGENIQGYFYFIDESLNKNQ NYYKEELQKLSVGYGVPLRLCYGKELFENLNILQVWDEVLNHLARWREILPDLPSLNFDENPLESFREIKDLAPSVYRKL LDNDEIFNLVLILFPEQKALKMLAEHFKRQNKTIYQQLASKLEEKLLSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34799; Mature: 34799
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYQTFNEIFNRFVFGTSKAKLLENIAENPERYLGIFRPTKPKTKLLQNLLTSHEIKFGD CCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCH AFEYLIEQYLKEHNFSPLSKKIPYYNKNKEKRESLELDQLAKKDNTYYFIEQKMRDDHDS HHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHH AKKRGQIDNFERKLEALIHRYGENIQGYFYFIDESLNKNQNYYKEELQKLSVGYGVPLRL HHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHH CYGKELFENLNILQVWDEVLNHLARWREILPDLPSLNFDENPLESFREIKDLAPSVYRKL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LDNDEIFNLVLILFPEQKALKMLAEHFKRQNKTIYQQLASKLEEKLLSLR HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDYQTFNEIFNRFVFGTSKAKLLENIAENPERYLGIFRPTKPKTKLLQNLLTSHEIKFGD CCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCH AFEYLIEQYLKEHNFSPLSKKIPYYNKNKEKRESLELDQLAKKDNTYYFIEQKMRDDHDS HHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHH AKKRGQIDNFERKLEALIHRYGENIQGYFYFIDESLNKNQNYYKEELQKLSVGYGVPLRL HHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHH CYGKELFENLNILQVWDEVLNHLARWREILPDLPSLNFDENPLESFREIKDLAPSVYRKL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LDNDEIFNLVLILFPEQKALKMLAEHFKRQNKTIYQQLASKLEEKLLSLR HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA