| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645945
GI number: 15645945
Start: 1392565
End: 1393674
Strand: Reverse
Name: Not Available
Synonym: HP1332
Alternate gene names: 15645945
Gene position: 1393674-1392565 (Counterclockwise)
Preceding gene: 161353438
Following gene: 15645944
Centisome position: 83.56
GC content: 42.07
Gene sequence:
>1110_bases GTGGAATTGAGTTATTATGAAATTTTAGAAGTGGAAAAACACAGCAACCAAGAGACCATTAAAAAGTCTTACAGAAAGCT GGCTTTAAAATACCACCCAGACAGAAACGCCGGCGATAAAGAAGCCGAAGAAAAATTCAAGCTCATCAATGAAGCCTATG GGGTGTTAAGCGATGAAAAGAAGCGGGCCTTATACGACAGGTATGGTAAAAAAGGCTTAAACCAAGCCGGCGCAAGCCAA GGCGATTTTTCTGATTTTTTTGAAGATTTAGGCTCGTTTTTTGAAGACGCTTTTGGGTTTGGCGCTAGGGGGAGTAAAAG GCAAAAAAGCTCTATCGCACCGGATTATTTGCAAACCCTTGAATTGAGTTTCAAAGAAGCGGTTTTTGGCTGTAAAAAAA CCATTAAAGTCCAATACCAGAGCGTTTGTGAAAGTTGCGATGGCACGGGCGCTAAAGACAAAGCCCTAGAGACTTGCAAG CAATGCAATGGGCAGGGGCAGGTGTTTATGCGTCAAGGTTTTATGAGTTTTGCGCAAACTTGTGGGGCGTGTCAAGGCAA GGGCAAGATCGTTAAAACCCCATGCCAAGCGTGCAAGGGTAAAACCTATATCCTTAAAGATGAAGAAATTGATGCGATAA TCCCTGAGGGCATTGATGATCAAAACCGCATGGTGCTTAAAAATAAAGGCAATGAATACGAGAAGGGAAAAAGAGGGGAT TTGTATTTAGAAGCGCAAGTCAAAGAAGATGAGCATTTCAAGCGCGAAGGCTGCGATTTATTCATTAAAGCGCCGGTGTT TTTCACCACTATCGCTTTAGGGCATACGATTAAAGTGCCGTCTTTAAAAGGGGACGAACTGGAATTAAAAATCCCTAGAA ACGCCAGAGACAAGCAGACTTTTGCGTTTAGAAACGAGGGCGTGAAACACCCTGAAAGCTCTTATAGAGGGAGTTTGATC GTGGAATTGCAAGTGATTTACCCTAAAAGTTTGAATAAAGAGCAGCAAGAATTGTTGGAAAAATTGCATGCGAGTTTTGG CTATGAGGGCGAGCCGCATAAAAGCGTTTTAGAAACCTGTATTTCTAAAATTAAAGACTGGTTCAAATAA
Upstream 100 bases:
>100_bases TTATCGTGTTATTTTATCTAAGTTTTGGCATGCGCCAAAACACGCAAAATTATCGCTTTTAAGATAAAATAAGCGTTTTG ATGCCATTTTTGGAGCGATC
Downstream 100 bases:
>100_bases AAGGTTGTTGATGCATGAGTTTCTAAAAGCTTTTAAAGACGCTTTCCCTCATACCATTTCTATCTTGTTAGGGTATTTGC TTATGGGAATGACTTTTGGA
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQ GDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTLELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCK QCNGQGQVFMRQGFMSFAQTCGACQGKGKIVKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGD LYLEAQVKEDEHFKREGCDLFIKAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDKQTFAFRNEGVKHPESSYRGSLI VELQVIYPKSLNKEQQELLEKLHASFGYEGEPHKSVLETCISKIKDWFK
Sequences:
>Translated_369_residues MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQ GDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTLELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCK QCNGQGQVFMRQGFMSFAQTCGACQGKGKIVKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGD LYLEAQVKEDEHFKREGCDLFIKAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDKQTFAFRNEGVKHPESSYRGSLI VELQVIYPKSLNKEQQELLEKLHASFGYEGEPHKSVLETCISKIKDWFK >Mature_369_residues MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQ GDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTLELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCK QCNGQGQVFMRQGFMSFAQTCGACQGKGKIVKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGD LYLEAQVKEDEHFKREGCDLFIKAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDKQTFAFRNEGVKHPESSYRGSLI VELQVIYPKSLNKEQQELLEKLHASFGYEGEPHKSVLETCISKIKDWFK
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI205360840, Length=348, Percent_Identity=29.3103448275862, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI205360838, Length=348, Percent_Identity=29.3103448275862, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI4504511, Length=356, Percent_Identity=30.3370786516854, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI194328760, Length=353, Percent_Identity=30.5949008498584, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI194328758, Length=355, Percent_Identity=30.9859154929577, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI5031741, Length=352, Percent_Identity=28.125, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI56549115, Length=358, Percent_Identity=27.0949720670391, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI201862587, Length=358, Percent_Identity=27.0949720670391, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI201862518, Length=358, Percent_Identity=27.0949720670391, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI6631085, Length=393, Percent_Identity=25.6997455470738, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI7706495, Length=343, Percent_Identity=28.2798833819242, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI194328762, Length=319, Percent_Identity=26.9592476489028, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI5453690, Length=363, Percent_Identity=25.6198347107438, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI47777312, Length=96, Percent_Identity=51.0416666666667, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI27151736, Length=108, Percent_Identity=45.3703703703704, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI88501736, Length=108, Percent_Identity=45.3703703703704, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI23503241, Length=99, Percent_Identity=50.5050505050505, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI39204547, Length=185, Percent_Identity=32.972972972973, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI17388799, Length=87, Percent_Identity=57.4712643678161, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI21553335, Length=77, Percent_Identity=51.9480519480519, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI45504382, Length=70, Percent_Identity=54.2857142857143, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI4885495, Length=68, Percent_Identity=61.7647058823529, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI29126218, Length=70, Percent_Identity=55.7142857142857, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI68077168, Length=91, Percent_Identity=46.1538461538462, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI68077166, Length=91, Percent_Identity=46.1538461538462, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI194306642, Length=86, Percent_Identity=47.6744186046512, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI194306640, Length=86, Percent_Identity=47.6744186046512, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI27735107, Length=88, Percent_Identity=43.1818181818182, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI9558755, Length=109, Percent_Identity=40.3669724770642, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI217035105, Length=76, Percent_Identity=43.421052631579, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI56687498, Length=154, Percent_Identity=35.0649350649351, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI24308127, Length=93, Percent_Identity=38.7096774193548, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI22749377, Length=66, Percent_Identity=51.5151515151515, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1786197, Length=359, Percent_Identity=42.0612813370474, Blast_Score=270, Evalue=9e-74, Organism=Escherichia coli, GI1787235, Length=348, Percent_Identity=27.2988505747126, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17553098, Length=358, Percent_Identity=30.7262569832402, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17553096, Length=358, Percent_Identity=30.7262569832402, Blast_Score=143, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17507263, Length=355, Percent_Identity=29.2957746478873, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17534355, Length=387, Percent_Identity=25.5813953488372, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI212645553, Length=341, Percent_Identity=27.8592375366569, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17563890, Length=360, Percent_Identity=27.5, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI115532378, Length=96, Percent_Identity=41.6666666666667, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17554644, Length=85, Percent_Identity=48.2352941176471, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17554874, Length=91, Percent_Identity=42.8571428571429, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17568643, Length=72, Percent_Identity=51.3888888888889, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI86563276, Length=122, Percent_Identity=40.9836065573771, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538236, Length=99, Percent_Identity=43.4343434343434, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324265, Length=374, Percent_Identity=29.6791443850267, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6323870, Length=358, Percent_Identity=28.7709497206704, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321094, Length=386, Percent_Identity=28.7564766839378, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6323119, Length=382, Percent_Identity=27.4869109947644, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323813, Length=107, Percent_Identity=43.9252336448598, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324103, Length=87, Percent_Identity=45.9770114942529, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322194, Length=100, Percent_Identity=41, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6324321, Length=68, Percent_Identity=50, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320888, Length=98, Percent_Identity=39.7959183673469, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6324252, Length=66, Percent_Identity=48.4848484848485, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646562, Length=345, Percent_Identity=31.0144927536232, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI24646560, Length=345, Percent_Identity=31.0144927536232, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI24646558, Length=345, Percent_Identity=31.0144927536232, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI24646556, Length=345, Percent_Identity=31.0144927536232, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI21357547, Length=345, Percent_Identity=31.0144927536232, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI20129487, Length=266, Percent_Identity=33.0827067669173, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24584014, Length=266, Percent_Identity=33.0827067669173, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI45552813, Length=377, Percent_Identity=27.5862068965517, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI45549272, Length=377, Percent_Identity=27.5862068965517, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI45552811, Length=377, Percent_Identity=27.5862068965517, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI28574949, Length=347, Percent_Identity=25.9365994236311, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24658562, Length=390, Percent_Identity=26.4102564102564, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24658555, Length=390, Percent_Identity=26.4102564102564, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI85726398, Length=366, Percent_Identity=26.5027322404372, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI18858081, Length=357, Percent_Identity=26.6106442577031, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI19920464, Length=350, Percent_Identity=25.7142857142857, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24654066, Length=101, Percent_Identity=47.5247524752475, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24654070, Length=101, Percent_Identity=47.5247524752475, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24654068, Length=101, Percent_Identity=47.5247524752475, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24654072, Length=101, Percent_Identity=47.5247524752475, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI17737735, Length=70, Percent_Identity=54.2857142857143, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28574723, Length=70, Percent_Identity=54.2857142857143, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24668523, Length=70, Percent_Identity=54.2857142857143, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24668492, Length=73, Percent_Identity=45.2054794520548, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24651439, Length=72, Percent_Identity=44.4444444444444, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24651436, Length=72, Percent_Identity=44.4444444444444, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24762799, Length=92, Percent_Identity=41.304347826087, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI21358311, Length=72, Percent_Identity=44.4444444444444, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI161077138, Length=65, Percent_Identity=49.2307692307692, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 41851; Mature: 41851
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS50076 DNAJ_2 ; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEK CCCCHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCHH KRALYDRYGKKGLNQAGASQGDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHH ELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH CGACQGKGKIVKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGD HCCCCCCCCEEECHHHHHCCCEEEEECCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCC LYLEAQVKEDEHFKREGCDLFIKAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDKQT EEEEEECCCHHHHHHCCCCEEEECHHHHHHHHHCCEEECCCCCCCCEEEECCCCCCCHHH FAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELLEKLHASFGYEGEPHKSVLETC HHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH ISKIKDWFK HHHHHHHCC >Mature Secondary Structure MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEK CCCCHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCHH KRALYDRYGKKGLNQAGASQGDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHH ELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH CGACQGKGKIVKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGD HCCCCCCCCEEECHHHHHCCCEEEEECCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCC LYLEAQVKEDEHFKREGCDLFIKAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDKQT EEEEEECCCHHHHHHCCCCEEEECHHHHHHHHHCCEEECCCCCCCCEEEECCCCCCCHHH FAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELLEKLHASFGYEGEPHKSVLETC HHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH ISKIKDWFK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]