| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645894
GI number: 15645894
Start: 1356686
End: 1357270
Strand: Reverse
Name: Not Available
Synonym: HP1281
Alternate gene names: 15645894
Gene position: 1357270-1356686 (Counterclockwise)
Preceding gene: 15645895
Following gene: 15646202
Centisome position: 81.38
GC content: 38.12
Gene sequence:
>585_bases ATGAAAATCTTTTTTATAGATAATTTTGATTCTTTCTCTTATAATTTGGTGTATGAATTAGAGTGTTTGGGTTATGAAGT GGCCGTTTATCAAAACGATATTGATCCGAGTTATCTCATGGATTTGATGAATGAAGAATCAAAAACGCCTTTATTGTTCA TTTCACCAGGACCTGGTAACCCTAATAGTTCAGGCAATCTTTTAAAAATCATTGCAATGGCTAAAAAGAAATTCCCCATT TTAGGGATTTGTTTAGGCTTGCAAGCTTTAGCGCAAAGCTATGGGGCTAAAATCATAAGAAGTAAAGAAATCGTGCATGG CAAAGCGACGGCCATCGCACTCAAAAAGCATGCCGTTTTTAAAGGTTTAGGGGAAAGCATGGTGGTGGGGCGTTACCATT CTTTAATGGCAAGCGGGTTGCCTAAAAATTTAGAAGTGATCGCTGAGCATGACAATATCCCTATGGCTATTGTCAATGAA GAAGATAAAATCTTAGCCTATCAATTCCACCCTGAAAGCATCATGACTTTACAAGGGAGGGCGTTGTTAGAGCAAAGCGT GGGGTTTTTAGAAGGGTTATTATGA
Upstream 100 bases:
>100_bases CAGGAGCCGGTATTGTGCTAGACAGCGTGCCACAAAACGAAGCGAATGAAACAAGAGCCAAAGCGCAAGCCCTTATTGAT GCGATCAGGAAAACAAGCTT
Downstream 100 bases:
>100_bases AAGAGATTTTAAACGCTCTGTATCATCAAAAAGATTTAAACGATGAAGAAGTCAAAAAGTTATTCACCCTTATTATCCAC GAAAAAGTAAGCCCGGTGCA
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGNPNSSGNLLKIIAMAKKKFPI LGICLGLQALAQSYGAKIIRSKEIVHGKATAIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLL
Sequences:
>Translated_194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGNPNSSGNLLKIIAMAKKKFPI LGICLGLQALAQSYGAKIIRSKEIVHGKATAIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLL >Mature_194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGNPNSSGNLLKIIAMAKKKFPI LGICLGLQALAQSYGAKIIRSKEIVHGKATAIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLL
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=189, Percent_Identity=40.2116402116402, Blast_Score=163, Evalue=8e-42, Organism=Escherichia coli, GI1789760, Length=185, Percent_Identity=38.9189189189189, Blast_Score=129, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6322638, Length=198, Percent_Identity=37.8787878787879, Blast_Score=118, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6323873, Length=108, Percent_Identity=38.8888888888889, Blast_Score=68, Evalue=8e-13,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 21438; Mature: 21438
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGN CEEEEEECCCCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCC PNSSGNLLKIIAMAKKKFPILGICLGLQALAQSYGAKIIRSKEIVHGKATAIALKKHAVF CCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHCHHEEECCHHCCCCHHEEEHHHHHHH KGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNEEDKILAYQFHPESIMTLQGR HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEECCH ALLEQSVGFLEGLL HHHHHHHHHHHHCC >Mature Secondary Structure MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGN CEEEEEECCCCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCC PNSSGNLLKIIAMAKKKFPILGICLGLQALAQSYGAKIIRSKEIVHGKATAIALKKHAVF CCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHCHHEEECCHHCCCCHHEEEHHHHHHH KGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNEEDKILAYQFHPESIMTLQGR HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEECCH ALLEQSVGFLEGLL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]