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The map label for this gene is rplJ

Identifier: 15645814

GI number: 15645814

Start: 1277696

End: 1278190

Strand: Reverse

Name: rplJ

Synonym: HP1200

Alternate gene names: 15645814

Gene position: 1278190-1277696 (Counterclockwise)

Preceding gene: 15645815

Following gene: 15645813

Centisome position: 76.64

GC content: 40.61

Gene sequence:

>495_bases
ATGCAAAAACAACATCAAAGGCAGCATAAAGTAGAGCTAGTCGCTAACTTAAAGTCGCAATTTGCAGATGCCAAAGCCCT
TTTAATTTGCGATTATAAGGGTCTTAGCGTGAGAAAATTGGAAGCTTTAAGGAATAAGGCTCGCAATCAAGGCATTAAAG
TGCAAGTGATTAAGAACACTCTTGCTCATATTGCCATGAAAGAGACCGGCTATTCTGATTTGGATTTGAAAGAAACCAAT
GTGTTTTTGTGGGGCGGTGATCAAATCGCTCTCTCTAAACTCGTGTTTGATTTCCAAAAAGAGCATAAAGATCACTTTGT
GTTGAAAGCGGGCTTGTTTGATAAAGAAAGCGTTAGCGTAGCTCATGTGGAAGCGGTTTCAAAACTCCCGAGCAAAGAAG
AGCTTATGGGAATGTTGCTTTCTGTTTGGACGGCTCCAGCACGCTATTTTGTGACCGGTTTAGACAATTTGCGTAAAGCG
AAAGAAGAAAACTAA

Upstream 100 bases:

>100_bases
GTTTTTAATCTTAGGCTGAAGATCGTAAGAGCTAAAAAGCTTAAAATTTCTTTTTTAAAAAGATAATCTTGCAGAGGTCT
AGTCTAGAAAGGAGGAAAAG

Downstream 100 bases:

>100_bases
GAGCCTGTGATGGCTTTAATTTAAAAAAATGTGAAGGATTGGATTATGGCAATTTCAAAAGAAGAAGTGTTAGAGTATAT
TGGTTCATTGAGCGTTTTAG

Product: 50S ribosomal protein L10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQKQHQRQHKVELVANLKSQFADAKALLICDYKGLSVRKLEALRNKARNQGIKVQVIKNTLAHIAMKETGYSDLDLKETN
VFLWGGDQIALSKLVFDFQKEHKDHFVLKAGLFDKESVSVAHVEAVSKLPSKEELMGMLLSVWTAPARYFVTGLDNLRKA
KEEN

Sequences:

>Translated_164_residues
MQKQHQRQHKVELVANLKSQFADAKALLICDYKGLSVRKLEALRNKARNQGIKVQVIKNTLAHIAMKETGYSDLDLKETN
VFLWGGDQIALSKLVFDFQKEHKDHFVLKAGLFDKESVSVAHVEAVSKLPSKEELMGMLLSVWTAPARYFVTGLDNLRKA
KEEN
>Mature_164_residues
MQKQHQRQHKVELVANLKSQFADAKALLICDYKGLSVRKLEALRNKARNQGIKVQVIKNTLAHIAMKETGYSDLDLKETN
VFLWGGDQIALSKLVFDFQKEHKDHFVLKAGLFDKESVSVAHVEAVSKLPSKEELMGMLLSVWTAPARYFVTGLDNLRKA
KEEN

Specific function: Unknown

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022973
- InterPro:   IPR001790
- InterPro:   IPR002363 [H]

Pfam domain/function: PF00466 Ribosomal_L10 [H]

EC number: NA

Molecular weight: Translated: 18606; Mature: 18606

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS01109 RIBOSOMAL_L10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQHQRQHKVELVANLKSQFADAKALLICDYKGLSVRKLEALRNKARNQGIKVQVIKNT
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHHH
LAHIAMKETGYSDLDLKETNVFLWGGDQIALSKLVFDFQKEHKDHFVLKAGLFDKESVSV
HHHHHHHCCCCCCCCEEECEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH
AHVEAVSKLPSKEELMGMLLSVWTAPARYFVTGLDNLRKAKEEN
HHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKQHQRQHKVELVANLKSQFADAKALLICDYKGLSVRKLEALRNKARNQGIKVQVIKNT
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHHH
LAHIAMKETGYSDLDLKETNVFLWGGDQIALSKLVFDFQKEHKDHFVLKAGLFDKESVSV
HHHHHHHCCCCCCCCEEECEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH
AHVEAVSKLPSKEELMGMLLSVWTAPARYFVTGLDNLRKAKEEN
HHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA