| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645803
GI number: 15645803
Start: 1259619
End: 1260659
Strand: Reverse
Name: Not Available
Synonym: HP1189
Alternate gene names: 15645803
Gene position: 1260659-1259619 (Counterclockwise)
Preceding gene: 15645804
Following gene: 15645802
Centisome position: 75.59
GC content: 42.36
Gene sequence:
>1041_bases ATGAAGACTTATAATGTCGCTATTGTTGGGGCCAGTGGGGCGGTAGGCCAAGAGCTGATTAAGGGTTTAGAAAATTCTTT TTTCCCAATTAAAAAATTTGTCCCGCTCGCTAGCACTAGGAGTGCTGGTAAAAAGATCAAAGCTTTCAATAAAGACTATG AAATTTTAGAAACCACGCATGAAGTTTTTGAAAGAGAAAAAATAGACATCGCCTTTTTTAGCGCTGGGGGGAGCGTGAGC GAAGAATTTGCTACAAGCGCTTCAAAAACGGCCTTAGTGGTTGATAACACGAGCTTTTTTAGATTGAATAAAGATGTGCC TTTAGTCGTTCCTGAAATCAACGCTAAAGAAATTTTTAACGCTCCCTTGAATATCATCGCTAACCCTAATTGCTCCACCA TTCAAATGACGCAAATCTTAAACCCCTTACATCTCCATTTTAAGATAAAAAGCGTGATTGTTAGCACCTATCAAGCCGTG AGTGGGGCAGGGAACAAGGGCATAGAGAGTTTAAAAAATGAGTTAAAAACCGCTTTAGAGTGTTTGGAAAAAGACCCCAC TATTGATTTAAACCAAGTCTTGCAAGCTGGGGCTTTCGCTTATCCGATCGCTTTCAATGCGATCGCTCATATTGATACTT TTAAGGAGAATGGTTACACGAAAGAAGAGCTAAAAATGCTGCATGAAACCCATAAAATCATGGGCGTGGATTTCCCTATC AGCGCGACTTGCGTGCGCGTGCCGGTATTGAGGAGCCATAGCGAGAGTTTGAGTATCGCTTTTGAAAAAGAATTCGATCT CAAAGAAGTCTATGAAGTTTTAAAAAACGCCCCTAGCGTGGCTGTTTGCGATGATCCCAGTCATAATCTTTACCCCACGC CCCTAAAAGCGAGCCACACGGATAGCGTCTTTATAGGGCGCTTGAGGAAGGATTTGTTTGATAAGAAAACTTTGCATGGC TTTTGTGTGGCGGATCAATTGAGAGTGGGGGCAGCCACCAACGCACTCAAAATCGCTCTGCATTACATTAAGAACGCTTG A
Upstream 100 bases:
>100_bases GAATTTAAAAGCGAAACTTTAAGCTTGAAAAACATGCATTCAGGCATGCAGTTGAATTGCTTGAGTTTTTTAAAAGCCCT TGAAATCATTGGAGAAAACG
Downstream 100 bases:
>100_bases GTTTATTCAAAGATAACAAAGATGAATGTGCATGCGCTTGAATTAAGGATAAGGATCAATCTAGCCCAATCTCTAAAGAA GAGCTTTAAGTTACTAGGCT
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKTYNVAIVGASGAVGQELIKGLENSFFPIKKFVPLASTRSAGKKIKAFNKDYEILETTHEVFEREKIDIAFFSAGGSVS EEFATSASKTALVVDNTSFFRLNKDVPLVVPEINAKEIFNAPLNIIANPNCSTIQMTQILNPLHLHFKIKSVIVSTYQAV SGAGNKGIESLKNELKTALECLEKDPTIDLNQVLQAGAFAYPIAFNAIAHIDTFKENGYTKEELKMLHETHKIMGVDFPI SATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVAVCDDPSHNLYPTPLKASHTDSVFIGRLRKDLFDKKTLHG FCVADQLRVGAATNALKIALHYIKNA
Sequences:
>Translated_346_residues MKTYNVAIVGASGAVGQELIKGLENSFFPIKKFVPLASTRSAGKKIKAFNKDYEILETTHEVFEREKIDIAFFSAGGSVS EEFATSASKTALVVDNTSFFRLNKDVPLVVPEINAKEIFNAPLNIIANPNCSTIQMTQILNPLHLHFKIKSVIVSTYQAV SGAGNKGIESLKNELKTALECLEKDPTIDLNQVLQAGAFAYPIAFNAIAHIDTFKENGYTKEELKMLHETHKIMGVDFPI SATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVAVCDDPSHNLYPTPLKASHTDSVFIGRLRKDLFDKKTLHG FCVADQLRVGAATNALKIALHYIKNA >Mature_346_residues MKTYNVAIVGASGAVGQELIKGLENSFFPIKKFVPLASTRSAGKKIKAFNKDYEILETTHEVFEREKIDIAFFSAGGSVS EEFATSASKTALVVDNTSFFRLNKDVPLVVPEINAKEIFNAPLNIIANPNCSTIQMTQILNPLHLHFKIKSVIVSTYQAV SGAGNKGIESLKNELKTALECLEKDPTIDLNQVLQAGAFAYPIAFNAIAHIDTFKENGYTKEELKMLHETHKIMGVDFPI SATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVAVCDDPSHNLYPTPLKASHTDSVFIGRLRKDLFDKKTLHG FCVADQLRVGAATNALKIALHYIKNA
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=347, Percent_Identity=26.5129682997118, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789841, Length=356, Percent_Identity=27.5280898876405, Blast_Score=109, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 38116; Mature: 38116
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS01103 ASD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYNVAIVGASGAVGQELIKGLENSFFPIKKFVPLASTRSAGKKIKAFNKDYEILETTH CCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCHHCCHHHHHCCCCHHHHHHHH EVFEREKIDIAFFSAGGSVSEEFATSASKTALVVDNTSFFRLNKDVPLVVPEINAKEIFN HHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCEEEEECCCCCEEECCCCHHHHHC APLNIIANPNCSTIQMTQILNPLHLHFKIKSVIVSTYQAVSGAGNKGIESLKNELKTALE CCCEEEECCCCCEEEHHHHCCCHHEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH CLEKDPTIDLNQVLQAGAFAYPIAFNAIAHIDTFKENGYTKEELKMLHETHKIMGVDFPI HHHCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCC SATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVAVCDDPSHNLYPTPLKASHT CCHHEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC DSVFIGRLRKDLFDKKTLHGFCVADQLRVGAATNALKIALHYIKNA CHHHHHHHHHHHHHHHHHCCEEEHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKTYNVAIVGASGAVGQELIKGLENSFFPIKKFVPLASTRSAGKKIKAFNKDYEILETTH CCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCHHCCHHHHHCCCCHHHHHHHH EVFEREKIDIAFFSAGGSVSEEFATSASKTALVVDNTSFFRLNKDVPLVVPEINAKEIFN HHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCEEEEECCCCCEEECCCCHHHHHC APLNIIANPNCSTIQMTQILNPLHLHFKIKSVIVSTYQAVSGAGNKGIESLKNELKTALE CCCEEEECCCCCEEEHHHHCCCHHEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH CLEKDPTIDLNQVLQAGAFAYPIAFNAIAHIDTFKENGYTKEELKMLHETHKIMGVDFPI HHHCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCC SATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVAVCDDPSHNLYPTPLKASHT CCHHEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC DSVFIGRLRKDLFDKKTLHGFCVADQLRVGAATNALKIALHYIKNA CHHHHHHHHHHHHHHHHHCCEEEHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]