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Identifier: 15645776

GI number: 15645776

Start: 1227531

End: 1228145

Strand: Reverse

Name: Not Available

Synonym: HP1162

Alternate gene names: 15645776

Gene position: 1228145-1227531 (Counterclockwise)

Preceding gene: 15645779

Following gene: 15645775

Centisome position: 73.64

GC content: 37.72

Gene sequence:

>615_bases
ATGAAAATAAAAACGAATCAAAAGAGGGTTTTTATGCAAGAAGCGTTGTTGCGTTTTCAAGAGGGTTTTAAGGAGTGGGG
TTATCTTATTTTGTTTTTATATTCTTTAGGGGGCGGGTATGTGGGGATTGTCATCGCCTCTATTTTGAGCGCTACCACGC
ACGCTTTAGATATAAAAATAACCATTTTTGTCGCTTTTTTAGGGAATATGGTAGGGAGTGGGGCTCTTGTAGTCTTTGCC
CGCTATCAAAAAAGAGATTTTTTGCAATATTTTCATAAGCACCGAAGAAAGCTTGCTTTAGCGAGTTTGTGGGTGAAACG
CTACGCCTTGCTCATGATTTTTGTCAATAAATATCTCTATGGGATTAAAAGCGTTGTGCCTTTGGCGGTTGGTTTTAGCA
AATACCCTTTAAAAAAGTTTTTATGGCTTAATGTTTTTTCCAGTTTTTTGTGGGCGCTCATCGTGGGGAGCGTTTCTTTT
CAAGCGAGCGATTGGGTGAAAACGCTGTATGAAAGGCTTTCTCATTACACTTCGTTTTTTATCATAAGTTTTGTTCTTAT
AGCGCTTTTAATATGGTTTTTATTGAAACGATATTCGCGCAAAATGGGTTTTTAA

Upstream 100 bases:

>100_bases
TATTCATCTCTTTAATCTTTATGATTAGGATTGCATGAACTGATTATTATACTAAAAGATAGCGTTTAAATCACCAATAG
GTTGAATAAGTTTGGATAAC

Downstream 100 bases:

>100_bases
GCAAGATGTTTAATTAAATGCGCTAGACTACGCCCACAAGCATTCGCTAAAAGCGGGTGCGTTAATATCTTTAAACACAA
GGATTGGATATGGGAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKIKTNQKRVFMQEALLRFQEGFKEWGYLILFLYSLGGGYVGIVIASILSATTHALDIKITIFVAFLGNMVGSGALVVFA
RYQKRDFLQYFHKHRRKLALASLWVKRYALLMIFVNKYLYGIKSVVPLAVGFSKYPLKKFLWLNVFSSFLWALIVGSVSF
QASDWVKTLYERLSHYTSFFIISFVLIALLIWFLLKRYSRKMGF

Sequences:

>Translated_204_residues
MKIKTNQKRVFMQEALLRFQEGFKEWGYLILFLYSLGGGYVGIVIASILSATTHALDIKITIFVAFLGNMVGSGALVVFA
RYQKRDFLQYFHKHRRKLALASLWVKRYALLMIFVNKYLYGIKSVVPLAVGFSKYPLKKFLWLNVFSSFLWALIVGSVSF
QASDWVKTLYERLSHYTSFFIISFVLIALLIWFLLKRYSRKMGF
>Mature_204_residues
MKIKTNQKRVFMQEALLRFQEGFKEWGYLILFLYSLGGGYVGIVIASILSATTHALDIKITIFVAFLGNMVGSGALVVFA
RYQKRDFLQYFHKHRRKLALASLWVKRYALLMIFVNKYLYGIKSVVPLAVGFSKYPLKKFLWLNVFSSFLWALIVGSVSF
QASDWVKTLYERLSHYTSFFIISFVLIALLIWFLLKRYSRKMGF

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI87082056, Length=155, Percent_Identity=27.0967741935484, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23778; Mature: 23778

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTNQKRVFMQEALLRFQEGFKEWGYLILFLYSLGGGYVGIVIASILSATTHALDIKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TIFVAFLGNMVGSGALVVFARYQKRDFLQYFHKHRRKLALASLWVKRYALLMIFVNKYLY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIKSVVPLAVGFSKYPLKKFLWLNVFSSFLWALIVGSVSFQASDWVKTLYERLSHYTSFF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IISFVLIALLIWFLLKRYSRKMGF
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIKTNQKRVFMQEALLRFQEGFKEWGYLILFLYSLGGGYVGIVIASILSATTHALDIKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TIFVAFLGNMVGSGALVVFARYQKRDFLQYFHKHRRKLALASLWVKRYALLMIFVNKYLY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIKSVVPLAVGFSKYPLKKFLWLNVFSSFLWALIVGSVSFQASDWVKTLYERLSHYTSFF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IISFVLIALLIWFLLKRYSRKMGF
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]