| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645664
GI number: 15645664
Start: 1113019
End: 1113900
Strand: Reverse
Name: Not Available
Synonym: HP1050
Alternate gene names: 15645664
Gene position: 1113900-1113019 (Counterclockwise)
Preceding gene: 15645665
Following gene: 15645663
Centisome position: 66.79
GC content: 41.84
Gene sequence:
>882_bases TTGGTAGTGAGTGTTCCTGCAACAAGTGCGAATTTAGGTCCCGGTTTTGATTGCTTGGGTTTGAGTTTGAATTTACGCAA TCGGTTTTTTATTGAGCCTAGCAGTTTCCATGCGGTGAAATTGGTTGGGGAGGGTGAAGGGATCCCTAAGTTTTTAACCA ACAATATTTTCACTAAAGTGTTTTATGAGATTTTAAAAAAGCATGGGAATGACGGCTCGTTTAAATTTTTATTGCATAAT AAAGTCCCTATTACAAGGGGCATGGGGTCTAGCTCGGCGATGATTGTGGGGGCGGTCGCTTCAGCGTTTGCGTTTTTAGG GTTTGATTTTGATAGAGAAAACATTGTCAATACCGCTCTAATTTATGAAAACCACCCGGATAATATCACTCCGGCGGTGT TTGGGGGGTATAATGCAGCGTTTGTGGAAAAAAAGAAAGTGATAAGTTTAAAAACCAAAATCCCTTCTTTTTTAAAAGCG GTGATGGTGATCCCTAATAGGGCCATTTCCACCAAGCAATCGCGCCATCTCTTGCCCAAGCGTTACAGCGTGCAAGAAAG CGTGTTTAACCTTTCGCATGCGAGTTTGATGACGATGGCGATTGTGCAGGGGAAGTGGGATTTATTGCGTTGTTGCTCTA AAGACAGGATGCATCAATATAAGCGCATGCAAACTTACCCCGTGTTGTTTGCGATCCAAAAGATCGCTTTAGAAAATAAC GCCCTAATGAGCACGCTTTCAGGGAGCGGTTCATCGTTTTTTAACATGTGTTATGAAGAAGACGCCCCTAAATTAAAGCA GGTTTTGAGCAAGAAATTCCCTAAATTTAGGGTAGCGGTTTTAGATTTTGATAATGATGGGGTTCTTATTGAGAAAGACT GA
Upstream 100 bases:
>100_bases AATTCACCCAATTGAACACGCCGTTTTACATTTTGCCTCCTATTTAGTGTATAATGCTAGTTTTAAAAATGAAAGGGTAT CAACAATAGGGGTTTAAAAT
Downstream 100 bases:
>100_bases AATTAAAATCCGCATGTGTGTGGCGTGCAGAATGCGCCAACCTCAAAAGGATTTGTTGCGTTTGAAAAGCTTTGAAAATC AAATCATGGAGTTTGATGGC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKVFYEILKKHGNDGSFKFLLHN KVPITRGMGSSSAMIVGAVASAFAFLGFDFDRENIVNTALIYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKA VMVIPNRAISTKQSRHLLPKRYSVQESVFNLSHASLMTMAIVQGKWDLLRCCSKDRMHQYKRMQTYPVLFAIQKIALENN ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD
Sequences:
>Translated_293_residues MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKVFYEILKKHGNDGSFKFLLHN KVPITRGMGSSSAMIVGAVASAFAFLGFDFDRENIVNTALIYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKA VMVIPNRAISTKQSRHLLPKRYSVQESVFNLSHASLMTMAIVQGKWDLLRCCSKDRMHQYKRMQTYPVLFAIQKIALENN ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD >Mature_293_residues MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKVFYEILKKHGNDGSFKFLLHN KVPITRGMGSSSAMIVGAVASAFAFLGFDFDRENIVNTALIYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKA VMVIPNRAISTKQSRHLLPKRYSVQESVFNLSHASLMTMAIVQGKWDLLRCCSKDRMHQYKRMQTYPVLFAIQKIALENN ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=287, Percent_Identity=24.0418118466899, Blast_Score=82, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6321814, Length=351, Percent_Identity=26.4957264957265, Blast_Score=108, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 32663; Mature: 32663
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS00627 GHMP_KINASES_ATP ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKV CEEECCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH FYEILKKHGNDGSFKFLLHNKVPITRGMGSSSAMIVGAVASAFAFLGFDFDRENIVNTAL HHHHHHHHCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCEEEE IYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKAVMVIPNRAISTKQSRHLLPK EEECCCCCCCCCEECCCCEEEEHHHHEEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC RYSVQESVFNLSHASLMTMAIVQGKWDLLRCCSKDRMHQYKRMQTYPVLFAIQKIALENN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD HHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEECC >Mature Secondary Structure MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKV CEEECCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH FYEILKKHGNDGSFKFLLHNKVPITRGMGSSSAMIVGAVASAFAFLGFDFDRENIVNTAL HHHHHHHHCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCEEEE IYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKAVMVIPNRAISTKQSRHLLPK EEECCCCCCCCCEECCCCEEEEHHHHEEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC RYSVQESVFNLSHASLMTMAIVQGKWDLLRCCSKDRMHQYKRMQTYPVLFAIQKIALENN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD HHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]