| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645658
GI number: 15645658
Start: 1105773
End: 1106885
Strand: Reverse
Name: Not Available
Synonym: HP1044
Alternate gene names: NA
Gene position: 1106885-1105773 (Counterclockwise)
Preceding gene: 15645660
Following gene: 15645657
Centisome position: 66.37
GC content: 37.2
Gene sequence:
>1113_bases ATGCTGATCTCCATAGCGTTTTTATTGGTTTTATATCTTTTGAATTATAGTTCTTTCAGGATGTTGAAATCGTTTTTAAC CTTAAAGAAAATCTCTCAATACGCTTATTTATGGTTTTTTATCCTTTTGAGCATAGGCGAGGCGGCTTTTGTTTTTTATA GAAATATTATGCCTAGCCATTTGTTTGTTTTGACTTCAGCGTGTTCGTTTGTGTCTTTTATTATTTTTATCCTTTCTTTA AGTTTTTACGGGTTTTCCTATTCCATAGAAAAAATAGATTTTTTGCATTCAAGGCGTAAAAGTTTAAAAAACTTTTTAAA ATTGGGGTTTTATCTGGCGTTATTAGGGTATTTTTGGCGTGGGTTTTATGAAGGGTTGGCCCGCCCTAAAATCAAAGAAA CCCCTATTTATTTGGATAAGCTGGATAAAGAATTAAAGATTATTTTACTCACAGACATGCATGTGGGGAGTTTGTTGCAA AAAGATTTTGTTGATTACATTGTAGAAGAAGTCAATCAAAAAGAAGTGGATATGGTGCTGATTGGGGGGGATTTAGTGGA TGAAAGCATTGAAAAAGTCAAATCTTTTTTACTGCCTTTAAACAACCTTAAAAGCACGCATGGCACTTTTTATGTGCCAG GAAATCATGAGTATTATCATGGCATAGAGCCGATTTTATCGTTTCTTGACACGCTTAATTTGACGATTTTAGGGAATGAG TGCGTGCATTTAGGGGGGATCAATTTGTGCGGCGTGTATGATTATTTCGCAAGGAAGCGTCAAAATTTTGCCCCTGATAT TGACAAAGCTTTAAAAAAGCGCAATGAGAGTAAGCCCACGATCCTTTTGGCCCACCAACCTAAACAAATTAGAAGCCTCA AAGAAAGCCACTCTGTAGATTTAGTCCTTTCAGGGCATACCCATGCAGGGCAAATCTTTCCCTTTAGCCTTTTAGTCAAG TTGGCGCAAACCTATTTACATGGTTTATACAAGCACAGCCCCACCACTCAAATTTATGTGAGCAGTGGGGCAGGGTATTG GGGGATTCCTTTAAGGTTTTTAGCCCCTAGCGAGATCGCATACCTTAGGCTTTTACCTAAAAATCAAGCTTAG
Upstream 100 bases:
>100_bases TTGAGACTGATAAAAAAGGAAATAGCACGATGAAACCTAAAGGGGATATTAGCGTTAATATGCTAATATAGTAGAACATT ATGACTACAAAAAGGGTGAT
Downstream 100 bases:
>100_bases TTAAACAAAATCTTAAAATCTTAATCGTAATCAAGCGGTTAAAAATAAGAACTAAACAAGGATTAAAAAACAACCGCCAA GACAAAGGGAAAGGAGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLISIAFLLVLYLLNYSSFRMLKSFLTLKKISQYAYLWFFILLSIGEAAFVFYRNIMPSHLFVLTSACSFVSFIIFILSL SFYGFSYSIEKIDFLHSRRKSLKNFLKLGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ KDFVDYIVEEVNQKEVDMVLIGGDLVDESIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLDTLNLTILGNE CVHLGGINLCGVYDYFARKRQNFAPDIDKALKKRNESKPTILLAHQPKQIRSLKESHSVDLVLSGHTHAGQIFPFSLLVK LAQTYLHGLYKHSPTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA
Sequences:
>Translated_370_residues MLISIAFLLVLYLLNYSSFRMLKSFLTLKKISQYAYLWFFILLSIGEAAFVFYRNIMPSHLFVLTSACSFVSFIIFILSL SFYGFSYSIEKIDFLHSRRKSLKNFLKLGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ KDFVDYIVEEVNQKEVDMVLIGGDLVDESIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLDTLNLTILGNE CVHLGGINLCGVYDYFARKRQNFAPDIDKALKKRNESKPTILLAHQPKQIRSLKESHSVDLVLSGHTHAGQIFPFSLLVK LAQTYLHGLYKHSPTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA >Mature_370_residues MLISIAFLLVLYLLNYSSFRMLKSFLTLKKISQYAYLWFFILLSIGEAAFVFYRNIMPSHLFVLTSACSFVSFIIFILSL SFYGFSYSIEKIDFLHSRRKSLKNFLKLGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ KDFVDYIVEEVNQKEVDMVLIGGDLVDESIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLDTLNLTILGNE CVHLGGINLCGVYDYFARKRQNFAPDIDKALKKRNESKPTILLAHQPKQIRSLKESHSVDLVLSGHTHAGQIFPFSLLVK LAQTYLHGLYKHSPTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily
Homologues:
Organism=Homo sapiens, GI210031196, Length=270, Percent_Identity=34.8148148148148, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI210031210, Length=294, Percent_Identity=33.6734693877551, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI115535030, Length=368, Percent_Identity=30.7065217391304, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI115535028, Length=368, Percent_Identity=30.7065217391304, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71996034, Length=358, Percent_Identity=29.0502793296089, Blast_Score=139, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1044_HELPY (O25685)
Other databases:
- EMBL: AE000511 - PIR: D64650 - RefSeq: NP_207834.1 - ProteinModelPortal: O25685 - GeneID: 899579 - GenomeReviews: AE000511_GR - KEGG: hpy:HP1044 - NMPDR: fig|85962.1.peg.1031 - TIGR: HP_1044 - HOGENOM: HBG728202 - OMA: YEGLARP - ProtClustDB: CLSK872352 - InterPro: IPR004843
Pfam domain/function: PF00149 Metallophos
EC number: NA
Molecular weight: Translated: 42457; Mature: 42457
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISIAFLLVLYLLNYSSFRMLKSFLTLKKISQYAYLWFFILLSIGEAAFVFYRNIMPSH CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFVLTSACSFVSFIIFILSLSFYGFSYSIEKIDFLHSRRKSLKNFLKLGFYLALLGYFWR HHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVDYIVEEVNQKEVDMVL HHHHHHCCCCCCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE IGGDLVDESIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLDTLNLTILGNE ECCHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCHHCCHHHHHHHHHHCCEEEECCC CVHLGGINLCGVYDYFARKRQNFAPDIDKALKKRNESKPTILLAHQPKQIRSLKESHSVD EEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEE LVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSPTTQIYVSSGAGYWGIPLRFLAPSEIA EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCEEEECCCCEE YLRLLPKNQA EEEECCCCCC >Mature Secondary Structure MLISIAFLLVLYLLNYSSFRMLKSFLTLKKISQYAYLWFFILLSIGEAAFVFYRNIMPSH CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFVLTSACSFVSFIIFILSLSFYGFSYSIEKIDFLHSRRKSLKNFLKLGFYLALLGYFWR HHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVDYIVEEVNQKEVDMVL HHHHHHCCCCCCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE IGGDLVDESIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLDTLNLTILGNE ECCHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCHHCCHHHHHHHHHHCCEEEECCC CVHLGGINLCGVYDYFARKRQNFAPDIDKALKKRNESKPTILLAHQPKQIRSLKESHSVD EEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEE LVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSPTTQIYVSSGAGYWGIPLRFLAPSEIA EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCEEEECCCCEE YLRLLPKNQA EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9252185