| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645611
GI number: 15645611
Start: 1058373
End: 1060175
Strand: Reverse
Name: Not Available
Synonym: HP0996
Alternate gene names: NA
Gene position: 1060175-1058373 (Counterclockwise)
Preceding gene: 15645612
Following gene: 15645610
Centisome position: 63.56
GC content: 33.28
Gene sequence:
>1803_bases ATGAAACGCTCCCACTTAGAAAATGCCCTAAATTATGCTTTAGAAAATAGCGAAACAGCTTACAATGAAATGTTTTTAGA ATGCGATAAGCAATTCATCTTAGAGAGTTGGCTCAATGACTTTGATTTGACTAAAGATTATAACGAGACTATGCACTTAG TTTTTTCTATCAAAGATAAGCCAGATGAAGAGACAATGCAAGGGCTTTTACATTCTACTTGGGAGAGCTTAAAAATAAGA TTGCCTGAATACAAGTTTGCCCTTGTGCCACACGCTCATCAAGACCATGCCCATATCCATTGTTTTATCAATAAGACTAA TCAGCTCACACGAAGAAGACTGCGTTTTAAGGGGCATGAAGATTGTAAAGAATTTTTTAATGAATTAAGAAGTGAGTTTG CTTATAGGTTGAATGACCACTTATTGAGCGAAGAATACTTGTATGTCAATGAGCCAAAACTTAAAGAGCTAGACAATATC AAACAACAATTACAAGACTTGGAAAAAGAAGAAAAAGCCTTAGAACAAATCAAATCCCCACAAGATGAGTGGGACTTAAA CAAGGCTTTACAAAGCGAGTATTTACAAGAACTCAAATATAAAAACAAAGCAAAAGCCCTAGACATTCAAAATAACCACA GCACCCCTTTAAAACAAAAGATTTCTGAATTTAAAATCGCTCTGTTTAATCACAAAGACACAAGCGATGATGAAAAAGAA CAGCTAGATATTGACAGGATAGATAAGAGAAAACCAGTAAGCGAACACTTAAAAAACACTAACAAACACGAGCTATACGA ACTCTTAGGCTTTTATCAAAAAGAATTAGATAAAAAACAAAACCATTCAGCCTTTAAGAATTTTGCTATTCTCAATGGTT TAGACAGAGACTTTGAAAGAGAGACTAATGGCTATTCTGTTTTAAAGAAAAAAGAAATGCTTTTAAATAAGCTTGAACAC CTAGACAAACGCCTTTTAGATAAAAACTCACACTTACTATTAGCCCAGCTAAGAAATGAAGTTAAAACCAAGCAAAACAT CCAATACAACACTCTAACTAATCCTATTCTTTTAGCCAAAGCCTTAGAACTTTCTAAAGATAAACGCCCCACTCTCAAAA CTTTTAAAAACGCTTATTTTAGTGCTAGAAAATATCAATTCATGCTAGAGAGCTTTAAAACTAAGCAAAATGACCCCACT TACAAGCTTAATGATAACACTTATGAGCTAGTGAGTAAGCAACTACAAGACTATCAAAACACCATGCTTTTATTAGCCAA AGAGAGATTACTTTTTTTAGAACAAGATTTAAAACAAAAAGAAGAAGAGTTTGAAAGAGCCAAAGAACATTATGTGAAAT CTTCAAAACATTATAGAGAAACTTCATTGTCTCCAAAAGAAAAACAAGGCTTTCTCAAACAAATTAAACAATTTTCTAAA ATTTCTAAGGATATTCTCTATACTTGTAATGAGATCATAGGAGCTAATAGGTTTTTAACCCACTATGACAACCTAAACCT TGAAAAAGTCCTAGAACACGCTAAAGATACTAAGCTAGAGCAAAAAGAAATTCAAGCTATCACAAAAGAGCCTAATAACG ATGAGCCTTGGATTGAGTTTGGTAAAAAAGAACAAGCTAGAGCTAAAGCACACTATCAAGCTATGCTAGAAAAAGAAAAA GCTAAAGAATTAGCTAAACAACAAGCTAACACCTTGCACTCTAATGAGCTTGATGATGACCCTAAAGCTCATGCTGGATT AAAACAAAATGACAACACAAACTTTAAAGGGCGTAATAGATAA
Upstream 100 bases:
>100_bases TTGGCACAAAAACAGCTAGTCCTGTGCTTATTAAAAACATAGGGCAAATCTAGTTGGCACAAAAACAGCTAGTCCTGTGC TTATTAAAAACATAGGGCAA
Downstream 100 bases:
>100_bases TGCTCTCAAGCGATGATTGCCTTTAATGTTCTTAATAAAGAATATACCCTTTGAAAGGGGTTTATTCTTGTTCTTTTCAC AAATTAGCTTATTTAAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Relaxase
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MKRSHLENALNYALENSETAYNEMFLECDKQFILESWLNDFDLTKDYNETMHLVFSIKDKPDEETMQGLLHSTWESLKIR LPEYKFALVPHAHQDHAHIHCFINKTNQLTRRRLRFKGHEDCKEFFNELRSEFAYRLNDHLLSEEYLYVNEPKLKELDNI KQQLQDLEKEEKALEQIKSPQDEWDLNKALQSEYLQELKYKNKAKALDIQNNHSTPLKQKISEFKIALFNHKDTSDDEKE QLDIDRIDKRKPVSEHLKNTNKHELYELLGFYQKELDKKQNHSAFKNFAILNGLDRDFERETNGYSVLKKKEMLLNKLEH LDKRLLDKNSHLLLAQLRNEVKTKQNIQYNTLTNPILLAKALELSKDKRPTLKTFKNAYFSARKYQFMLESFKTKQNDPT YKLNDNTYELVSKQLQDYQNTMLLLAKERLLFLEQDLKQKEEEFERAKEHYVKSSKHYRETSLSPKEKQGFLKQIKQFSK ISKDILYTCNEIIGANRFLTHYDNLNLEKVLEHAKDTKLEQKEIQAITKEPNNDEPWIEFGKKEQARAKAHYQAMLEKEK AKELAKQQANTLHSNELDDDPKAHAGLKQNDNTNFKGRNR
Sequences:
>Translated_600_residues MKRSHLENALNYALENSETAYNEMFLECDKQFILESWLNDFDLTKDYNETMHLVFSIKDKPDEETMQGLLHSTWESLKIR LPEYKFALVPHAHQDHAHIHCFINKTNQLTRRRLRFKGHEDCKEFFNELRSEFAYRLNDHLLSEEYLYVNEPKLKELDNI KQQLQDLEKEEKALEQIKSPQDEWDLNKALQSEYLQELKYKNKAKALDIQNNHSTPLKQKISEFKIALFNHKDTSDDEKE QLDIDRIDKRKPVSEHLKNTNKHELYELLGFYQKELDKKQNHSAFKNFAILNGLDRDFERETNGYSVLKKKEMLLNKLEH LDKRLLDKNSHLLLAQLRNEVKTKQNIQYNTLTNPILLAKALELSKDKRPTLKTFKNAYFSARKYQFMLESFKTKQNDPT YKLNDNTYELVSKQLQDYQNTMLLLAKERLLFLEQDLKQKEEEFERAKEHYVKSSKHYRETSLSPKEKQGFLKQIKQFSK ISKDILYTCNEIIGANRFLTHYDNLNLEKVLEHAKDTKLEQKEIQAITKEPNNDEPWIEFGKKEQARAKAHYQAMLEKEK AKELAKQQANTLHSNELDDDPKAHAGLKQNDNTNFKGRNR >Mature_600_residues MKRSHLENALNYALENSETAYNEMFLECDKQFILESWLNDFDLTKDYNETMHLVFSIKDKPDEETMQGLLHSTWESLKIR LPEYKFALVPHAHQDHAHIHCFINKTNQLTRRRLRFKGHEDCKEFFNELRSEFAYRLNDHLLSEEYLYVNEPKLKELDNI KQQLQDLEKEEKALEQIKSPQDEWDLNKALQSEYLQELKYKNKAKALDIQNNHSTPLKQKISEFKIALFNHKDTSDDEKE QLDIDRIDKRKPVSEHLKNTNKHELYELLGFYQKELDKKQNHSAFKNFAILNGLDRDFERETNGYSVLKKKEMLLNKLEH LDKRLLDKNSHLLLAQLRNEVKTKQNIQYNTLTNPILLAKALELSKDKRPTLKTFKNAYFSARKYQFMLESFKTKQNDPT YKLNDNTYELVSKQLQDYQNTMLLLAKERLLFLEQDLKQKEEEFERAKEHYVKSSKHYRETSLSPKEKQGFLKQIKQFSK ISKDILYTCNEIIGANRFLTHYDNLNLEKVLEHAKDTKLEQKEIQAITKEPNNDEPWIEFGKKEQARAKAHYQAMLEKEK AKELAKQQANTLHSNELDDDPKAHAGLKQNDNTNFKGRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71436; Mature: 71436
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSHLENALNYALENSETAYNEMFLECDKQFILESWLNDFDLTKDYNETMHLVFSIKDK CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCC PDEETMQGLLHSTWESLKIRLPEYKFALVPHAHQDHAHIHCFINKTNQLTRRRLRFKGHE CCHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCEEEEEEECHHHHHHHHHHCCCCH DCKEFFNELRSEFAYRLNDHLLSEEYLYVNEPKLKELDNIKQQLQDLEKEEKALEQIKSP HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QDEWDLNKALQSEYLQELKYKNKAKALDIQNNHSTPLKQKISEFKIALFNHKDTSDDEKE CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHEECCCCCCCCHHH QLDIDRIDKRKPVSEHLKNTNKHELYELLGFYQKELDKKQNHSAFKNFAILNGLDRDFER HCCHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ETNGYSVLKKKEMLLNKLEHLDKRLLDKNSHLLLAQLRNEVKTKQNIQYNTLTNPILLAK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH ALELSKDKRPTLKTFKNAYFSARKYQFMLESFKTKQNDPTYKLNDNTYELVSKQLQDYQN HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHH TMLLLAKERLLFLEQDLKQKEEEFERAKEHYVKSSKHYRETSLSPKEKQGFLKQIKQFSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ISKDILYTCNEIIGANRFLTHYDNLNLEKVLEHAKDTKLEQKEIQAITKEPNNDEPWIEF HHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHC GKKEQARAKAHYQAMLEKEKAKELAKQQANTLHSNELDDDPKAHAGLKQNDNTNFKGRNR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRSHLENALNYALENSETAYNEMFLECDKQFILESWLNDFDLTKDYNETMHLVFSIKDK CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCC PDEETMQGLLHSTWESLKIRLPEYKFALVPHAHQDHAHIHCFINKTNQLTRRRLRFKGHE CCHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCEEEEEEECHHHHHHHHHHCCCCH DCKEFFNELRSEFAYRLNDHLLSEEYLYVNEPKLKELDNIKQQLQDLEKEEKALEQIKSP HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QDEWDLNKALQSEYLQELKYKNKAKALDIQNNHSTPLKQKISEFKIALFNHKDTSDDEKE CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHEECCCCCCCCHHH QLDIDRIDKRKPVSEHLKNTNKHELYELLGFYQKELDKKQNHSAFKNFAILNGLDRDFER HCCHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ETNGYSVLKKKEMLLNKLEHLDKRLLDKNSHLLLAQLRNEVKTKQNIQYNTLTNPILLAK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH ALELSKDKRPTLKTFKNAYFSARKYQFMLESFKTKQNDPTYKLNDNTYELVSKQLQDYQN HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHH TMLLLAKERLLFLEQDLKQKEEEFERAKEHYVKSSKHYRETSLSPKEKQGFLKQIKQFSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ISKDILYTCNEIIGANRFLTHYDNLNLEKVLEHAKDTKLEQKEIQAITKEPNNDEPWIEF HHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHC GKKEQARAKAHYQAMLEKEKAKELAKQQANTLHSNELDDDPKAHAGLKQNDNTNFKGRNR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA