| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645606
GI number: 15645606
Start: 1053600
End: 1054229
Strand: Reverse
Name: Not Available
Synonym: HP0991
Alternate gene names: NA
Gene position: 1054229-1053600 (Counterclockwise)
Preceding gene: 15645607
Following gene: 15645603
Centisome position: 63.21
GC content: 31.43
Gene sequence:
>630_bases ATGGCTTTTGAAATGAAAGAACACTCTAAAGAATTCCCAAATAAAAAGCAACTTCAAACCATGCTTGAGAACGCTTTTGA TAATGGAGCTGAAAGTTTTATTGATGATTGGCACGAACGCTTTGGGGGTATAAGTAGAGAGAATACTTATAAAGCACTTG GCATTAAAGAATATAGTGATGAAGGAAAGATATTAGCTTTTGGCGAAAGAAGTTATATTAGACAATATAAAAAAGATTTT GAAGAAAGCACTTATGATACTAGACAAACCTTATCTGCTATGGCTAATATGGGTGGCGAAAACGATTATAAAATTACTTG GTTAAAACCCAAATATCAGCTCCATAGTTCAAATAATATTAAACCCTTAATGTCAAACACAGAGTTGTTAAATATGATAG AGCTAACCAATATCAAAAAAGAATATGTTATGGGCTGTAATATGGAAATAGATGGTTCTAAATATCCCATTCATAAAGAT TGGGGATTTTTTGGTAAGGCAAAAGTCCCAGAAACTTGGAGAAATAAGATTTGGGAATGTATTAAGAATAAAGTAAAGTC CTATGACAACACTACCACTAAAATAGGAATAGTTTGGAAAAAAAATACTTATTCTATCTCTCATCACTAA
Upstream 100 bases:
>100_bases CTTAATTTAATCAATAAAGAAGACACTAAAGATAAAGAAGAACTTGCAAAAAAAAATCAAAGAAATTAAAGAAAAAGCTA AAGTTTTAAGGCAAAAATTT
Downstream 100 bases:
>100_bases ACCCTTAATCCCATATACTAAAAATGGGAAAACCAAATTGGTCAAATTTAACATTAGGGTTTTGAAAGTATATTCTGGCT CTTTCTCTTTCGTTTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MAFEMKEHSKEFPNKKQLQTMLENAFDNGAESFIDDWHERFGGISRENTYKALGIKEYSDEGKILAFGERSYIRQYKKDF EESTYDTRQTLSAMANMGGENDYKITWLKPKYQLHSSNNIKPLMSNTELLNMIELTNIKKEYVMGCNMEIDGSKYPIHKD WGFFGKAKVPETWRNKIWECIKNKVKSYDNTTTKIGIVWKKNTYSISHH
Sequences:
>Translated_209_residues MAFEMKEHSKEFPNKKQLQTMLENAFDNGAESFIDDWHERFGGISRENTYKALGIKEYSDEGKILAFGERSYIRQYKKDF EESTYDTRQTLSAMANMGGENDYKITWLKPKYQLHSSNNIKPLMSNTELLNMIELTNIKKEYVMGCNMEIDGSKYPIHKD WGFFGKAKVPETWRNKIWECIKNKVKSYDNTTTKIGIVWKKNTYSISHH >Mature_208_residues AFEMKEHSKEFPNKKQLQTMLENAFDNGAESFIDDWHERFGGISRENTYKALGIKEYSDEGKILAFGERSYIRQYKKDFE ESTYDTRQTLSAMANMGGENDYKITWLKPKYQLHSSNNIKPLMSNTELLNMIELTNIKKEYVMGCNMEIDGSKYPIHKDW GFFGKAKVPETWRNKIWECIKNKVKSYDNTTTKIGIVWKKNTYSISHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24586; Mature: 24455
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFEMKEHSKEFPNKKQLQTMLENAFDNGAESFIDDWHERFGGISRENTYKALGIKEYSD CCCCCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEECC EGKILAFGERSYIRQYKKDFEESTYDTRQTLSAMANMGGENDYKITWLKPKYQLHSSNNI CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCC KPLMSNTELLNMIELTNIKKEYVMGCNMEIDGSKYPIHKDWGFFGKAKVPETWRNKIWEC CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IKNKVKSYDNTTTKIGIVWKKNTYSISHH HHHHHHHCCCCCEEEEEEEECCEEECCCC >Mature Secondary Structure AFEMKEHSKEFPNKKQLQTMLENAFDNGAESFIDDWHERFGGISRENTYKALGIKEYSD CCCCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEECC EGKILAFGERSYIRQYKKDFEESTYDTRQTLSAMANMGGENDYKITWLKPKYQLHSSNNI CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCC KPLMSNTELLNMIELTNIKKEYVMGCNMEIDGSKYPIHKDWGFFGKAKVPETWRNKIWEC CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IKNKVKSYDNTTTKIGIVWKKNTYSISHH HHHHHHHCCCCCEEEEEEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA