Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15645601

GI number: 15645601

Start: 1048714

End: 1049427

Strand: Reverse

Name: Not Available

Synonym: HP0986

Alternate gene names: NA

Gene position: 1049427-1048714 (Counterclockwise)

Preceding gene: 15645603

Following gene: 15645600

Centisome position: 62.92

GC content: 32.91

Gene sequence:

>714_bases
GTGGAAACTTTTTTCTCTTTGCATGTCCCAAATCGTAGGATAAAACAAAACGGCATTATAGACGAAAAGAGTTTAGAAAA
GATACAAGAGCGTAAAAATTTAAGCAGTTTATTGTATGAACATCGCGCAAGAATTATTCCGCTCTATAAAAGGATCAATG
AAAACCATGCCAAAAATAAAACGATAAATATTTGCGAAAATAATCTTAAATTGTTTTACAAAGACCATCAAGTTTGCGTG
AATATAGATAAAAAGGAAATAAAGCTCAGGTATTCAGAAGATGAAGATGATTTTAGAAAATACATTATAGGGGGTTGGTT
TGAAGAATATATTTATTGTGAATTGCTGGAGTTGCTAGACAAACAAGTGATCTGTGATCTACGCTTGAATATGATTTTGG
GCGTTGGAAACACAAACGCCACTCAAGGAGATAAGCACCCTATTTATACTGAGCTTGACATAGCTTTTAGCGATGGTAAA
AATCTCTATGTTGCAGAGTGCAAGAGTGGGGAGTTAAAAAATAAGGGGGTTTTAGCCGCTCTATCTGCTGACGCTCAAAT
TTTTGGTGGAGCCAATGCGAAATGCATTTTAATATCAATTGATGGTAATTTGGGGCAAGTTCTTCAAGAAAAAGTTAAAA
TTTTGAACATTGAGTTTATCTTTAAATATTTTAAAAAAAATATTGAGAATTATATTAATAACTCTAGGCGTTGA

Upstream 100 bases:

>100_bases
ACCTTATTTCTATATTGAAGAAAAAGCCCAACGACTATTATTTTTTAAAAATCCAAGCGGTATTGAGCCTTTTGCTATTC
CGGCTATCCCCATTAAAGAT

Downstream 100 bases:

>100_bases
TAAATTAGGGAGAGGGTGTTTAGTTGGTGTTAAACCAATATGCTATTGGATTTTAGAGTTTTTAAGAAACAATTAGTGCC
AATGAATCCCAATAATCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNKTINICENNLKLFYKDHQVCV
NIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLDKQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGK
NLYVAECKSGELKNKGVLAALSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR

Sequences:

>Translated_237_residues
METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNKTINICENNLKLFYKDHQVCV
NIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLDKQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGK
NLYVAECKSGELKNKGVLAALSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR
>Mature_237_residues
METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNKTINICENNLKLFYKDHQVCV
NIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLDKQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGK
NLYVAECKSGELKNKGVLAALSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27542; Mature: 27542

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNK
CCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TINICENNLKLFYKDHQVCVNIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLD
EEEEECCCEEEEEECCEEEEECCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGKNLYVAECKSGELKNKGVLAA
HHHHHHEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCEEEE
LSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR
EECCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNK
CCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TINICENNLKLFYKDHQVCVNIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLD
EEEEECCCEEEEEECCEEEEECCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGKNLYVAECKSGELKNKGVLAA
HHHHHHEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCEEEE
LSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR
EECCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA