| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645601
GI number: 15645601
Start: 1048714
End: 1049427
Strand: Reverse
Name: Not Available
Synonym: HP0986
Alternate gene names: NA
Gene position: 1049427-1048714 (Counterclockwise)
Preceding gene: 15645603
Following gene: 15645600
Centisome position: 62.92
GC content: 32.91
Gene sequence:
>714_bases GTGGAAACTTTTTTCTCTTTGCATGTCCCAAATCGTAGGATAAAACAAAACGGCATTATAGACGAAAAGAGTTTAGAAAA GATACAAGAGCGTAAAAATTTAAGCAGTTTATTGTATGAACATCGCGCAAGAATTATTCCGCTCTATAAAAGGATCAATG AAAACCATGCCAAAAATAAAACGATAAATATTTGCGAAAATAATCTTAAATTGTTTTACAAAGACCATCAAGTTTGCGTG AATATAGATAAAAAGGAAATAAAGCTCAGGTATTCAGAAGATGAAGATGATTTTAGAAAATACATTATAGGGGGTTGGTT TGAAGAATATATTTATTGTGAATTGCTGGAGTTGCTAGACAAACAAGTGATCTGTGATCTACGCTTGAATATGATTTTGG GCGTTGGAAACACAAACGCCACTCAAGGAGATAAGCACCCTATTTATACTGAGCTTGACATAGCTTTTAGCGATGGTAAA AATCTCTATGTTGCAGAGTGCAAGAGTGGGGAGTTAAAAAATAAGGGGGTTTTAGCCGCTCTATCTGCTGACGCTCAAAT TTTTGGTGGAGCCAATGCGAAATGCATTTTAATATCAATTGATGGTAATTTGGGGCAAGTTCTTCAAGAAAAAGTTAAAA TTTTGAACATTGAGTTTATCTTTAAATATTTTAAAAAAAATATTGAGAATTATATTAATAACTCTAGGCGTTGA
Upstream 100 bases:
>100_bases ACCTTATTTCTATATTGAAGAAAAAGCCCAACGACTATTATTTTTTAAAAATCCAAGCGGTATTGAGCCTTTTGCTATTC CGGCTATCCCCATTAAAGAT
Downstream 100 bases:
>100_bases TAAATTAGGGAGAGGGTGTTTAGTTGGTGTTAAACCAATATGCTATTGGATTTTAGAGTTTTTAAGAAACAATTAGTGCC AATGAATCCCAATAATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNKTINICENNLKLFYKDHQVCV NIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLDKQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGK NLYVAECKSGELKNKGVLAALSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR
Sequences:
>Translated_237_residues METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNKTINICENNLKLFYKDHQVCV NIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLDKQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGK NLYVAECKSGELKNKGVLAALSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR >Mature_237_residues METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNKTINICENNLKLFYKDHQVCV NIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLDKQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGK NLYVAECKSGELKNKGVLAALSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27542; Mature: 27542
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNK CCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TINICENNLKLFYKDHQVCVNIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLD EEEEECCCEEEEEECCEEEEECCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH KQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGKNLYVAECKSGELKNKGVLAA HHHHHHEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCEEEE LSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR EECCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure METFFSLHVPNRRIKQNGIIDEKSLEKIQERKNLSSLLYEHRARIIPLYKRINENHAKNK CCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TINICENNLKLFYKDHQVCVNIDKKEIKLRYSEDEDDFRKYIIGGWFEEYIYCELLELLD EEEEECCCEEEEEECCEEEEECCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH KQVICDLRLNMILGVGNTNATQGDKHPIYTELDIAFSDGKNLYVAECKSGELKNKGVLAA HHHHHHEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCEEEE LSADAQIFGGANAKCILISIDGNLGQVLQEKVKILNIEFIFKYFKKNIENYINNSRR EECCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA