Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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The map label for this gene is Not Available

Identifier: 15645514

GI number: 15645514

Start: 947580

End: 949706

Strand: Reverse

Name: Not Available

Synonym: HP0896

Alternate gene names: NA

Gene position: 949706-947580 (Counterclockwise)

Preceding gene: 15645516

Following gene: 15645513

Centisome position: 56.94

GC content: 43.54

Gene sequence:

>2127_bases
ATGAAAAAAACCCTTTTACTCTCTCTCTCTCTCTCTCTCTCGTTTTTGCTCCACGCTGAAGACGACGGCTTTTACACAAG
CGTGGGCTATCAAATCGGTGAAGCCGCTCAAATGGTGAAAAACACCAAAGGCATTCAAGAGCTTTCAGACAATTATGAAA
AGCTGAACAATCTTTTGAATAATTACAGCACCCTAAACACCCTTATCAAATTGTCCGCTGATCCGAGCGCGATTAACGAC
GCAAGGGATAATCTAGGCTCAAGCTCTAGGAATTTGCTTGATGTCAAAACCAATTCCCCCGCGTATCAAGCCGTGCTTTT
AGCACTCAATGCTGCAGTGGGGTTGTGGCAAGTTACAAGCTACGCTTTTACTGCTTGTGGTCCTGGCAGTAACGAGAATG
CGAATGGAGGGATCCAAACTTTTAATAATGTGCCAGGACAAGATACGACGACCATCACTTGCAATTCGTATTATGAGCCA
GGACATGGTGGGCCTATATCCACTGCAAATTATGCGAAAATCAATCAAGCCTATCAAATCATCCAAAAGGCTTTGACAGC
CAATGGAGCTAATGGAGATGGGGTCCCCGTTTTAAGCAACACCACTACAAAACTTGATTTCACTATCAATGGAGACAAAA
GAACGGGGGGCAAACCAAATACACCTGAAAAGTTCCCATGGAGTGATGGGAAATATATTCACACCCAATGGATTAACACA
ATAGTAACACCAACAGAAACAAATATCAACACAGAAAATAACGCTCAAGAGCTTTTAAAACAAGCGAGCATCATTATCAC
TACCCTAAATGAGGCATGCCCAAACTTCCAAAATGGTGGTAGAAGTTATTGGCAAGGGATAAGCGGCAATGGGACAATGT
GCGGGATGTTTAAGAATGAAATCAGCGCGATCCAAGGCATGATCGCTAACGCTCAAGAAGCTGTCGCGCAAAGCAAAATC
GTTAGTGAAAACGCGCAAAATCAAAACAACTTGGATACTGGAAAACCATTCAACCCTTACACGGACGCCAGCTTTGCGCA
AAGCATGCTCAAAAACGCTCAAGCGCAAGCAGAGATTTTAAACCAAGCCGAACAAGTAGTAAAAAACTTTGAAAAAATCC
CTACAGCCTTTGTATCAGACTCTTTAGGGGTGTGTTATGAAGTGCAAGGGGGTGAGCGTAGGGGCACCAATCCAGGTCAG
GTAACTTCTAACACTTGGGGAGCCGGTTGCGCGTATGTGAAACAAACCATAACGAATTTAGACAACAGCATCGCTCACTT
TGGCACTCAAGAGCAGCAGATACAGCAAGCCGAAAACATCGCTGACACTCTAGTGAATTTCAAATCTAGATACAGCGAAT
TAGGCAACACCTATAACAGCATCACCACCGCGCTCTCCAAAGTCCCTAACGCGCAAAGCTTGCAAAACGTGGTGAGCAAA
AAGAATAACCCCTATAGCCCTCAAGGCATAGAGACCAATTACTACCTCAATCAAAATTCTTACAACCAAATCCAAACCAT
CAACCAAGAACTAGGGCGTAACCCCTTTAGGAAAGTGGGCATCGTCAATTCTCAAACCAACAATGGTGCCATGAATGGGA
TCGGTATTCAGGTGGGCTATAAGCAATTCTTTGGCCAAAAAAGAAAATGGGGCGCTAGGTATTACGGCTTTTTTGACTAC
AACCATGCGTTCATTAAATCCAGCTTCTTCAACTCGGCTTCTGATGTGTGGACTTATGGTTTTGGAGCGGACGCTCTTTA
TAACTTCATCAACGATAAAGCCACCAATTTCTTAGGCAAAAACAACAAGCTTTCCGTGGGGCTTTTTGGAGGGATTGCGT
TAGCGGGCACTTCATGGCTTAATTCTGAGTATGTGAATTTAGCCACCGTGAATAACGTCTATAACGCTAAAATGAATGTG
GCGAATTTCCAATTCTTATTCAATATGGGAGTGAGGATGAATTTAGCCAGATCCAAGAAAAAAGGCAGCGATCATGCGGC
TCAGCATGGGATTGAACTAGGGCTTAAAATCCCCACCATCAACACGAACTATTATTCTTTCATGGGGGCTGAACTCAAAT
ACAGAAGGCTTTATAGCGTGTATTTGAATTATGTGTTCGCTTACTAA

Upstream 100 bases:

>100_bases
AAAAAAAAAAAACGATTTTATGCTATATTAACGAAATCTTGTGATAAGATCTTATTCTTTTAAAAGACTTATCTAACCAT
TTTAATTTCAAGGAGAAAAC

Downstream 100 bases:

>100_bases
GCTTTTTGTGAAACTCCCTTTTTAAGGGGTTTTTTTTTGAACTCTCTTTTTAAATTCTCTTTTTAAAGAGATTTCTTTTT
TTTAAGCTTTTTTTTGAATT

Product: outer membrane protein (omp19)

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 708; Mature: 708

Protein sequence:

>708_residues
MKKTLLLSLSLSLSFLLHAEDDGFYTSVGYQIGEAAQMVKNTKGIQELSDNYEKLNNLLNNYSTLNTLIKLSADPSAIND
ARDNLGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTSYAFTACGPGSNENANGGIQTFNNVPGQDTTTITCNSYYEP
GHGGPISTANYAKINQAYQIIQKALTANGANGDGVPVLSNTTTKLDFTINGDKRTGGKPNTPEKFPWSDGKYIHTQWINT
IVTPTETNINTENNAQELLKQASIIITTLNEACPNFQNGGRSYWQGISGNGTMCGMFKNEISAIQGMIANAQEAVAQSKI
VSENAQNQNNLDTGKPFNPYTDASFAQSMLKNAQAQAEILNQAEQVVKNFEKIPTAFVSDSLGVCYEVQGGERRGTNPGQ
VTSNTWGAGCAYVKQTITNLDNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSK
KNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVNSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDY
NHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNV
ANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY

Sequences:

>Translated_708_residues
MKKTLLLSLSLSLSFLLHAEDDGFYTSVGYQIGEAAQMVKNTKGIQELSDNYEKLNNLLNNYSTLNTLIKLSADPSAIND
ARDNLGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTSYAFTACGPGSNENANGGIQTFNNVPGQDTTTITCNSYYEP
GHGGPISTANYAKINQAYQIIQKALTANGANGDGVPVLSNTTTKLDFTINGDKRTGGKPNTPEKFPWSDGKYIHTQWINT
IVTPTETNINTENNAQELLKQASIIITTLNEACPNFQNGGRSYWQGISGNGTMCGMFKNEISAIQGMIANAQEAVAQSKI
VSENAQNQNNLDTGKPFNPYTDASFAQSMLKNAQAQAEILNQAEQVVKNFEKIPTAFVSDSLGVCYEVQGGERRGTNPGQ
VTSNTWGAGCAYVKQTITNLDNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSK
KNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVNSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDY
NHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNV
ANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
>Mature_708_residues
MKKTLLLSLSLSLSFLLHAEDDGFYTSVGYQIGEAAQMVKNTKGIQELSDNYEKLNNLLNNYSTLNTLIKLSADPSAIND
ARDNLGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTSYAFTACGPGSNENANGGIQTFNNVPGQDTTTITCNSYYEP
GHGGPISTANYAKINQAYQIIQKALTANGANGDGVPVLSNTTTKLDFTINGDKRTGGKPNTPEKFPWSDGKYIHTQWINT
IVTPTETNINTENNAQELLKQASIIITTLNEACPNFQNGGRSYWQGISGNGTMCGMFKNEISAIQGMIANAQEAVAQSKI
VSENAQNQNNLDTGKPFNPYTDASFAQSMLKNAQAQAEILNQAEQVVKNFEKIPTAFVSDSLGVCYEVQGGERRGTNPGQ
VTSNTWGAGCAYVKQTITNLDNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSK
KNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVNSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDY
NHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNV
ANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77693; Mature: 77693

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLLSLSLSLSFLLHAEDDGFYTSVGYQIGEAAQMVKNTKGIQELSDNYEKLNNLLN
CCCEEEEEEECEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYSTLNTLIKLSADPSAINDARDNLGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTS
HHHHHHHHEEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
YAFTACGPGSNENANGGIQTFNNVPGQDTTTITCNSYYEPGHGGPISTANYAKINQAYQI
HHEEECCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
IQKALTANGANGDGVPVLSNTTTKLDFTINGDKRTGGKPNTPEKFPWSDGKYIHTQWINT
HHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHH
IVTPTETNINTENNAQELLKQASIIITTLNEACPNFQNGGRSYWQGISGNGTMCGMFKNE
EECCCCCCCCCCCCHHHHHHHHHHEEEEHHHHCCCCCCCCHHHHCCCCCCCCEEHHHHHH
ISAIQGMIANAQEAVAQSKIVSENAQNQNNLDTGKPFNPYTDASFAQSMLKNAQAQAEIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NQAEQVVKNFEKIPTAFVSDSLGVCYEVQGGERRGTNPGQVTSNTWGAGCAYVKQTITNL
HHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
DNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHC
KNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVNSQTNNGAMNGIGIQVGY
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHCCCEECCCCCCCCCCEEEEECH
KQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGK
HHHCCCHHCCCCEEEEEECCCHHHHHHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCCC
NNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKK
CCCEEEEEECCHHHHCCHHCCCCCEEEEEECCHHHCEECHHHEEEEECCCCEEEHHHHHC
KGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
CCCHHHHHCCCEEEEEECEECCCHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTLLLSLSLSLSFLLHAEDDGFYTSVGYQIGEAAQMVKNTKGIQELSDNYEKLNNLLN
CCCEEEEEEECEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYSTLNTLIKLSADPSAINDARDNLGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTS
HHHHHHHHEEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
YAFTACGPGSNENANGGIQTFNNVPGQDTTTITCNSYYEPGHGGPISTANYAKINQAYQI
HHEEECCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
IQKALTANGANGDGVPVLSNTTTKLDFTINGDKRTGGKPNTPEKFPWSDGKYIHTQWINT
HHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHH
IVTPTETNINTENNAQELLKQASIIITTLNEACPNFQNGGRSYWQGISGNGTMCGMFKNE
EECCCCCCCCCCCCHHHHHHHHHHEEEEHHHHCCCCCCCCHHHHCCCCCCCCEEHHHHHH
ISAIQGMIANAQEAVAQSKIVSENAQNQNNLDTGKPFNPYTDASFAQSMLKNAQAQAEIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NQAEQVVKNFEKIPTAFVSDSLGVCYEVQGGERRGTNPGQVTSNTWGAGCAYVKQTITNL
HHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
DNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHC
KNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVNSQTNNGAMNGIGIQVGY
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHCCCEECCCCCCCCCCEEEEECH
KQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGK
HHHCCCHHCCCCEEEEEECCCHHHHHHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCCC
NNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKK
CCCEEEEEECCHHHHCCHHCCCCCEEEEEECCHHHCEECHHHEEEEECCCCEEEHHHHHC
KGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
CCCHHHHHCCCEEEEEECEECCCHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA