| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645493
GI number: 15645493
Start: 924551
End: 925426
Strand: Reverse
Name: Not Available
Synonym: HP0874
Alternate gene names: NA
Gene position: 925426-924551 (Counterclockwise)
Preceding gene: 15645494
Following gene: 15645492
Centisome position: 55.49
GC content: 40.3
Gene sequence:
>876_bases ATGAAACGAAGGGATTTTATTAAAACGACTACTTTAGGCGCTACAGGTGCTGTTTTAGGAGCACAGATTTTGCAGGCAGA AGAAAGTAAAGGGAGTGTTGCAAAATATAAAATAGAAGCTCAATACAGCATTGATTTTGATTCTGCAGAACACACTTCAC TTTTCATTCCCATGCCGAGTGTTGTAGCGAGCAATGTGCATTTACAAGGCAATCATGCTAGCTATAAAAGCATGCTCAAT TTTGGAGTGCCTTATTTGCAAGTGGATTTTTTAAAAAGCACTCAAAAAAAGCAAGTCCATTTGTCTTATGAGATCGCTAG CTATCAATTGAATGAGCGTTTGTTTGAAACGAGCGATTTTGTAGCAATGGGGCGTTATGAAAGAGACGATGCGAGCGTGG CTAACATTGCCAACCAGCTTAAGGGAACAACCCCTAAAGAAAGCGTTCGCAATTTTTATGCGTTCATCAAGCATGAGATG CCTAAGAGACAGAAGGCTTTAGAGGGTAAAGAAAATTTACCTAAGCGTGAGAGTTTGCCCTGGTTTGCAACCATTTCAAA AGAGAGCATGTTTGTGTCCTTATGCCATGCGTGCGGGATTAAAAGCGCTGAAGTGCAAGGCTTGAAACTGGGTCAAAACA GCGTGGTGAAAAACGCTCCTAGAGTGGAAGTGTATTTGAAAGATTCATTTCTAGCGTTTGATTTTCAAAATAATCACAAG GAAGTTTTTATCCCGTTGAATCGTCATAAAGACATGCAGTTAGATTCTGCCTTATTGGCGACTTTTGGCGATGCTTTTGC CCTTGTGGATGGTAGGGATTTAGGCAATTACGAGAGCAAACTTTTTGAAAAAAGAGTGTCCTATACGATTGTCTAA
Upstream 100 bases:
>100_bases TCAAAATTTAGGTTTTTGGATACTTATCAATCCTTTGGTGGTGTGTCCTATTTTTTCATTCATTCAACGAATTTAAAAAT TACAATAAAGAGTTATAGTT
Downstream 100 bases:
>100_bases AGGCATGAAATCTAGGAATATTCCTTGATAGCGGGCTTTCCTTTTTAGGGAGAGTTTGCAAAAAGGGTTTAAAGGATTGT CTTTATGCGAGAATTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: KatA Associated Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKRRDFIKTTTLGATGAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPSVVASNVHLQGNHASYKSMLN FGVPYLQVDFLKSTQKKQVHLSYEIASYQLNERLFETSDFVAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEM PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPRVEVYLKDSFLAFDFQNNHK EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV
Sequences:
>Translated_291_residues MKRRDFIKTTTLGATGAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPSVVASNVHLQGNHASYKSMLN FGVPYLQVDFLKSTQKKQVHLSYEIASYQLNERLFETSDFVAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEM PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPRVEVYLKDSFLAFDFQNNHK EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV >Mature_291_residues MKRRDFIKTTTLGATGAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPSVVASNVHLQGNHASYKSMLN FGVPYLQVDFLKSTQKKQVHLSYEIASYQLNERLFETSDFVAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEM PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPRVEVYLKDSFLAFDFQNNHK EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32797; Mature: 32797
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRDFIKTTTLGATGAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPS CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECHH VVASNVHLQGNHASYKSMLNFGVPYLQVDFLKSTQKKQVHLSYEIASYQLNERLFETSDF HHHCCEEEECCCHHHHHHHHCCCCEEEEEEHHCCCCCEEEEEEEEEHHHHHHHHHHCCCE VAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEMPKRQKALEGKENLPKRESLP EEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCC WFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPRVEVYLKDSFLAFDFQNNHK EEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCHHHCCCCEEEEEEECCEEEEEEECCCC EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV EEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCEECC >Mature Secondary Structure MKRRDFIKTTTLGATGAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPS CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECHH VVASNVHLQGNHASYKSMLNFGVPYLQVDFLKSTQKKQVHLSYEIASYQLNERLFETSDF HHHCCEEEECCCHHHHHHHHCCCCEEEEEEHHCCCCCEEEEEEEEEHHHHHHHHHHCCCE VAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEMPKRQKALEGKENLPKRESLP EEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCC WFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPRVEVYLKDSFLAFDFQNNHK EEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCHHHCCCCEEEEEEECCEEEEEEECCCC EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV EEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA