| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645469
GI number: 15645469
Start: 901118
End: 902701
Strand: Reverse
Name: Not Available
Synonym: HP0850
Alternate gene names: 15645469
Gene position: 902701-901118 (Counterclockwise)
Preceding gene: 15645471
Following gene: 15645468
Centisome position: 54.12
GC content: 41.22
Gene sequence:
>1584_bases ATGGAAAACAACCCAAACAATAACCAAGCGTCATTAGAACGCAACGAATTGCACAACACCATTTGGAAAGTGGCTAACGA ATTGAGAGGCTCAGTGGATGGCTGGGATTTTAAGCAATACGTTTTAGGCATTCTTTTTTACCGCTACATTTCAGAAAACA TGACTCATTACATCAATAAAGAAGAGCGAAAGCGCGATCCGAGTTTTGATTACGCTAAATTAAGCGATGAAAAGGCCGAG CGTGGAAGAAAACACCTTATTGAACAAAAAGGCTTTTTCATCCCGCCAAGCGCTTTATTTTGTAATGCGCTAAAAAACGC GTGCCATAACGAAGATCTCAATGTAACCTTACAAAATATTTTTAACGAAATAGAAAAATCTAGCCTTGGCACTCCATCAG AAGAAAATGTCAAAGGCTTGTTTGCGGATTTAGATGTCAATAGCAATAAATTAGGGAGCTCTCATCAAAATAGGGTGGAA AAATTGACTAAAATCCTTGAAGCCATAGGGGGCATGCAATTAGGCGATTATTTAAAAAGCGGGATTGATGTTTTTGGCGA CGCTTATGAATATTTAATGGCCATGTATGCGAGCAACGCCGGCAAAAGCGGAGGGGAATTTTTCACCCCCCAAGAAGTGA GCGAACTGCTCGCTAAAATCACCCTACACGGCCAAGAGAGCGTCAATAAAGTTTATGACCCATGCTGTGGGAGTGGGAGC TTACTCTTACAATTTTCTAAAGTGTTAGGCGATAAAAATGTCTCAAAAGGGTATTTTGGGCAAGAAATCAATTTGACCAC TTACAACCTTTGCCGTATCAACATGTTTTTGCATGACATCAATTATTCTAAATTCCATATTGCGCACGGGGACACGCTTT TAGACCCAAAACATGAAGACGATGAGCCTTTTGATGCGATCGTTTCCAACCCTCCTTATTCCACTAAATGGGTGGGCGAT AGCAACCCCATTTTAATCAACGATGAGCGCTTTAGCCCGGCTGGTGTGCTAGCGCCCAAAAACGCCGCCGATCTCGCATT CACTATGCACATGCTTTCTTATTTATCCAATAGCGGCACGGCTGCGATCGTGGAATTTCCCGGGGTGCTTTATAGGGGAA ACGCTGAAGCAAAAATCAGAGAATATTTAGTCAAAGAGAATGTCATTGACTGCGTGATCGCTTTACCAGACAACCTCTTT TTTGGAACGAGTATCGCTACTTGCATTTTAGTGCTTAAGAAAAACAAACAAGACGACACCACGCTTTTTATTGATGCGAG TAAGGAATTTGTCAAAGAGGGCAAGAAAAACAAGCTCAAAGAGCGCAACCGAGAAAAGATTTTGCAAACCTATATTGAAA GAAAAGAGATTAAGCATTTTTGCGCCCTAGCTAATATTGAGAAAATCAAAGAAAACGATTACAATCTCTCCGTGAATCGC TATGTGGAGCAAGAAGACACCAAAGAAGCCATTGACATTAAAGCGCTTAATAGTGAGATTGCTCAAATCGTAGAAAAGCA AAGCGCTTTAAGGAACCGTCTTGAATCCATCATCAAAGAGTTAGAAGGGGGGCAAAATGCATAA
Upstream 100 bases:
>100_bases AAGGAATAAAAAAATAATATTCTTTGCTATAATGAAACCTTTAAAGGCTGACAACGCCAAACAGAACCGCCAATCAAAAC ACAAAAAAGGGGCTTATATC
Downstream 100 bases:
>100_bases AATAGAGCAACTGCTCCAAACTCTAGCGCCTAAGGGGGTGGAGTTTAGGAAGTTGGGGGATATTATCTTATCGTTAAAAA CCGGATTAAATCCAAGAAAA
Product: type I restriction enzyme M protein (hsdM)
Products: NA
Alternate protein names: M.EcoR124II [H]
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MENNPNNNQASLERNELHNTIWKVANELRGSVDGWDFKQYVLGILFYRYISENMTHYINKEERKRDPSFDYAKLSDEKAE RGRKHLIEQKGFFIPPSALFCNALKNACHNEDLNVTLQNIFNEIEKSSLGTPSEENVKGLFADLDVNSNKLGSSHQNRVE KLTKILEAIGGMQLGDYLKSGIDVFGDAYEYLMAMYASNAGKSGGEFFTPQEVSELLAKITLHGQESVNKVYDPCCGSGS LLLQFSKVLGDKNVSKGYFGQEINLTTYNLCRINMFLHDINYSKFHIAHGDTLLDPKHEDDEPFDAIVSNPPYSTKWVGD SNPILINDERFSPAGVLAPKNAADLAFTMHMLSYLSNSGTAAIVEFPGVLYRGNAEAKIREYLVKENVIDCVIALPDNLF FGTSIATCILVLKKNKQDDTTLFIDASKEFVKEGKKNKLKERNREKILQTYIERKEIKHFCALANIEKIKENDYNLSVNR YVEQEDTKEAIDIKALNSEIAQIVEKQSALRNRLESIIKELEGGQNA
Sequences:
>Translated_527_residues MENNPNNNQASLERNELHNTIWKVANELRGSVDGWDFKQYVLGILFYRYISENMTHYINKEERKRDPSFDYAKLSDEKAE RGRKHLIEQKGFFIPPSALFCNALKNACHNEDLNVTLQNIFNEIEKSSLGTPSEENVKGLFADLDVNSNKLGSSHQNRVE KLTKILEAIGGMQLGDYLKSGIDVFGDAYEYLMAMYASNAGKSGGEFFTPQEVSELLAKITLHGQESVNKVYDPCCGSGS LLLQFSKVLGDKNVSKGYFGQEINLTTYNLCRINMFLHDINYSKFHIAHGDTLLDPKHEDDEPFDAIVSNPPYSTKWVGD SNPILINDERFSPAGVLAPKNAADLAFTMHMLSYLSNSGTAAIVEFPGVLYRGNAEAKIREYLVKENVIDCVIALPDNLF FGTSIATCILVLKKNKQDDTTLFIDASKEFVKEGKKNKLKERNREKILQTYIERKEIKHFCALANIEKIKENDYNLSVNR YVEQEDTKEAIDIKALNSEIAQIVEKQSALRNRLESIIKELEGGQNA >Mature_527_residues MENNPNNNQASLERNELHNTIWKVANELRGSVDGWDFKQYVLGILFYRYISENMTHYINKEERKRDPSFDYAKLSDEKAE RGRKHLIEQKGFFIPPSALFCNALKNACHNEDLNVTLQNIFNEIEKSSLGTPSEENVKGLFADLDVNSNKLGSSHQNRVE KLTKILEAIGGMQLGDYLKSGIDVFGDAYEYLMAMYASNAGKSGGEFFTPQEVSELLAKITLHGQESVNKVYDPCCGSGS LLLQFSKVLGDKNVSKGYFGQEINLTTYNLCRINMFLHDINYSKFHIAHGDTLLDPKHEDDEPFDAIVSNPPYSTKWVGD SNPILINDERFSPAGVLAPKNAADLAFTMHMLSYLSNSGTAAIVEFPGVLYRGNAEAKIREYLVKENVIDCVIALPDNLF FGTSIATCILVLKKNKQDDTTLFIDASKEFVKEGKKNKLKERNREKILQTYIERKEIKHFCALANIEKIKENDYNLSVNR YVEQEDTKEAIDIKALNSEIAQIVEKQSALRNRLESIIKELEGGQNA
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities. The EcoR124/3 I enzyme recognizes 5'-GAAN(7)RTCG-3' [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790808, Length=249, Percent_Identity=24.0963855421687, Blast_Score=73, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR004546 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 59534; Mature: 59534
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNPNNNQASLERNELHNTIWKVANELRGSVDGWDFKQYVLGILFYRYISENMTHYINK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC EERKRDPSFDYAKLSDEKAERGRKHLIEQKGFFIPPSALFCNALKNACHNEDLNVTLQNI HHHCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHH FNEIEKSSLGTPSEENVKGLFADLDVNSNKLGSSHQNRVEKLTKILEAIGGMQLGDYLKS HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GIDVFGDAYEYLMAMYASNAGKSGGEFFTPQEVSELLAKITLHGQESVNKVYDPCCGSGS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCH LLLQFSKVLGDKNVSKGYFGQEINLTTYNLCRINMFLHDINYSKFHIAHGDTLLDPKHED HHHHHHHHHCCCCCCCCCCCCCCCCEEEEHEEEEEHHEECCCCEEEEECCCCCCCCCCCC DEPFDAIVSNPPYSTKWVGDSNPILINDERFSPAGVLAPKNAADLAFTMHMLSYLSNSGT CCCHHHHHCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC AAIVEFPGVLYRGNAEAKIREYLVKENVIDCVIALPDNLFFGTSIATCILVLKKNKQDDT EEEEECCCEEEECCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCC TLFIDASKEFVKEGKKNKLKERNREKILQTYIERKEIKHFCALANIEKIKENDYNLSVNR EEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH YVEQEDTKEAIDIKALNSEIAQIVEKQSALRNRLESIIKELEGGQNA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MENNPNNNQASLERNELHNTIWKVANELRGSVDGWDFKQYVLGILFYRYISENMTHYINK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC EERKRDPSFDYAKLSDEKAERGRKHLIEQKGFFIPPSALFCNALKNACHNEDLNVTLQNI HHHCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHH FNEIEKSSLGTPSEENVKGLFADLDVNSNKLGSSHQNRVEKLTKILEAIGGMQLGDYLKS HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GIDVFGDAYEYLMAMYASNAGKSGGEFFTPQEVSELLAKITLHGQESVNKVYDPCCGSGS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCH LLLQFSKVLGDKNVSKGYFGQEINLTTYNLCRINMFLHDINYSKFHIAHGDTLLDPKHED HHHHHHHHHCCCCCCCCCCCCCCCCEEEEHEEEEEHHEECCCCEEEEECCCCCCCCCCCC DEPFDAIVSNPPYSTKWVGDSNPILINDERFSPAGVLAPKNAADLAFTMHMLSYLSNSGT CCCHHHHHCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC AAIVEFPGVLYRGNAEAKIREYLVKENVIDCVIALPDNLFFGTSIATCILVLKKNKQDDT EEEEECCCEEEECCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCC TLFIDASKEFVKEGKKNKLKERNREKILQTYIERKEIKHFCALANIEKIKENDYNLSVNR EEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH YVEQEDTKEAIDIKALNSEIAQIVEKQSALRNRLESIIKELEGGQNA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2784505 [H]