Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15645303

GI number: 15645303

Start: 728118

End: 728987

Strand: Reverse

Name: Not Available

Synonym: HP0679

Alternate gene names: 15645303

Gene position: 728987-728118 (Counterclockwise)

Preceding gene: 15645304

Following gene: 15645302

Centisome position: 43.71

GC content: 40.11

Gene sequence:

>870_bases
ATGCTTTTTGCGATGATTGGTTCAGGGGGGTTTATCGCTCCCAAGCACTTGCAAGCGATTAGAGATACAGGGCATTTTTT
GGATTGCTCTTTTGATATTCATGATAGCGTGGGGGTTTTAGATGAGTATTTCGCGCAATCAGAGTTTTTTACGAATATTG
AAGATTTTGAAAAGCATTTAGAGCAATCTAAGGATATGGGTAAAGAAATCAACTATTTGAGTGTTTGCACGCCTACGCAC
ACGCATTTTGATCACATCCGTTTCGGGTTAAGAAACGGCATGCATGTGATTTGTGAAAAACCCTTAGTTTTAGACCCTGG
CGAAATACAAGAATTGAAAGATTTAGAGGTGAAACACCAAAAAAGGGTGTTTAGTCTTTTACCCTTGCGCTTGCATTGCG
ACACGCTGGCTTTGAAAGAAAAAATTAAGAGCGAATTAGACAAAAACCCTAGCAAGGTGTTTGACATCACGCTCACTTAT
ATCAGCGTTCAAGGGAAATGGTATTTTTCTTCATGGCGAGCGGATGTGAATAGGAGCGGAGGGTTAGCCACTCAAATGGG
GGTGAATATTTTTGACACTTTAATCTATTTGTTTGGAAGCGTTAAAGACAAGGTTATCAATAAAGAAGAGCCTGATTGCG
TAGGGGGGATACTCTTTTTAGAGCATGCCAAAATAAGATGGTTTTTTTCCATCAATCCAGAACACATGGGAGTAGCCAAA
GAAAAGGTTTATCATAAAATGATCCTAGAGGGCGAAGAAGTCAATCTCACGCAGAGCTTTGATAACTTGTATATAGAAAG
CTACAAACAGATTTTAGCTCAAGGGGGGTTTGGTTTGGATGACGCTATGGCGTCTGTCAAATTGGCTTAA

Upstream 100 bases:

>100_bases
GTGTTGGATCGATCGGTGGAGTGTTTTAATTGCCAATAATATAAGCTTAAATAAGCTAATCTTTGCTAAAATGAGATTTA
AAATTATTTAAGGAAGATGA

Downstream 100 bases:

>100_bases
TGAATTAAGAAACCTTCCAGTCAGCGAACCCAATGAAGATTCGCATGTTTTGTGTTGCAAAAACAAAACAGACCAATAAA
GGCATCACTTTTAAAAGCGT

Product: lipopolysaccharide biosynthesis protein (wbpB)

Products: NA

Alternate protein names: Oxidoreductase Domain Protein; Oxidoreductase; MviM Protein; Lipopolysaccharide Biosynthesis Protein WbpB; Oxidoreductase-Like; Lipopolysaccharide Biosynthesis Protein; Oxidoreductase Gfo/Idh/MocA Family; Uracil-DNA Glycosylase Superfamily Protein; Lipopolysaccaride Biosynthesis Protein WbpB; Gfo/Idh/MocA Family Oxidoreductase; Regulatory Protein LacI; Oxidoreductase Family Protein; Oxidoreductase-Like Protein

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKDMGKEINYLSVCTPTH
THFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA

Sequences:

>Translated_289_residues
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKDMGKEINYLSVCTPTH
THFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA
>Mature_289_residues
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKDMGKEINYLSVCTPTH
THFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32941; Mature: 32941

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHL
CEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH
EQSKDMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQ
HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHHHH
KRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNRSG
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEHHHCCCCCCC
GLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECEEEEEEEECHHHHCHHH
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA
HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECC
>Mature Secondary Structure
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHL
CEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH
EQSKDMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQ
HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHHHH
KRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNRSG
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEHHHCCCCCCC
GLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECEEEEEEEECHHHHCHHH
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA
HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA