| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645303
GI number: 15645303
Start: 728118
End: 728987
Strand: Reverse
Name: Not Available
Synonym: HP0679
Alternate gene names: 15645303
Gene position: 728987-728118 (Counterclockwise)
Preceding gene: 15645304
Following gene: 15645302
Centisome position: 43.71
GC content: 40.11
Gene sequence:
>870_bases ATGCTTTTTGCGATGATTGGTTCAGGGGGGTTTATCGCTCCCAAGCACTTGCAAGCGATTAGAGATACAGGGCATTTTTT GGATTGCTCTTTTGATATTCATGATAGCGTGGGGGTTTTAGATGAGTATTTCGCGCAATCAGAGTTTTTTACGAATATTG AAGATTTTGAAAAGCATTTAGAGCAATCTAAGGATATGGGTAAAGAAATCAACTATTTGAGTGTTTGCACGCCTACGCAC ACGCATTTTGATCACATCCGTTTCGGGTTAAGAAACGGCATGCATGTGATTTGTGAAAAACCCTTAGTTTTAGACCCTGG CGAAATACAAGAATTGAAAGATTTAGAGGTGAAACACCAAAAAAGGGTGTTTAGTCTTTTACCCTTGCGCTTGCATTGCG ACACGCTGGCTTTGAAAGAAAAAATTAAGAGCGAATTAGACAAAAACCCTAGCAAGGTGTTTGACATCACGCTCACTTAT ATCAGCGTTCAAGGGAAATGGTATTTTTCTTCATGGCGAGCGGATGTGAATAGGAGCGGAGGGTTAGCCACTCAAATGGG GGTGAATATTTTTGACACTTTAATCTATTTGTTTGGAAGCGTTAAAGACAAGGTTATCAATAAAGAAGAGCCTGATTGCG TAGGGGGGATACTCTTTTTAGAGCATGCCAAAATAAGATGGTTTTTTTCCATCAATCCAGAACACATGGGAGTAGCCAAA GAAAAGGTTTATCATAAAATGATCCTAGAGGGCGAAGAAGTCAATCTCACGCAGAGCTTTGATAACTTGTATATAGAAAG CTACAAACAGATTTTAGCTCAAGGGGGGTTTGGTTTGGATGACGCTATGGCGTCTGTCAAATTGGCTTAA
Upstream 100 bases:
>100_bases GTGTTGGATCGATCGGTGGAGTGTTTTAATTGCCAATAATATAAGCTTAAATAAGCTAATCTTTGCTAAAATGAGATTTA AAATTATTTAAGGAAGATGA
Downstream 100 bases:
>100_bases TGAATTAAGAAACCTTCCAGTCAGCGAACCCAATGAAGATTCGCATGTTTTGTGTTGCAAAAACAAAACAGACCAATAAA GGCATCACTTTTAAAAGCGT
Product: lipopolysaccharide biosynthesis protein (wbpB)
Products: NA
Alternate protein names: Oxidoreductase Domain Protein; Oxidoreductase; MviM Protein; Lipopolysaccharide Biosynthesis Protein WbpB; Oxidoreductase-Like; Lipopolysaccharide Biosynthesis Protein; Oxidoreductase Gfo/Idh/MocA Family; Uracil-DNA Glycosylase Superfamily Protein; Lipopolysaccaride Biosynthesis Protein WbpB; Gfo/Idh/MocA Family Oxidoreductase; Regulatory Protein LacI; Oxidoreductase Family Protein; Oxidoreductase-Like Protein
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKDMGKEINYLSVCTPTH THFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA
Sequences:
>Translated_289_residues MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKDMGKEINYLSVCTPTH THFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA >Mature_289_residues MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKDMGKEINYLSVCTPTH THFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 32941; Mature: 32941
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHL CEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH EQSKDMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQ HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHHHH KRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNRSG HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEHHHCCCCCCC GLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECEEEEEEEECHHHHCHHH EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECC >Mature Secondary Structure MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHL CEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH EQSKDMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPGEIQELKDLEVKHQ HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHHHH KRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNRSG HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEHHHCCCCCCC GLATQMGVNIFDTLIYLFGSVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECEEEEEEEECHHHHCHHH EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAMASVKLA HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA