| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645261
GI number: 15645261
Start: 684146
End: 684598
Strand: Reverse
Name: Not Available
Synonym: HP0637
Alternate gene names: NA
Gene position: 684598-684146 (Counterclockwise)
Preceding gene: 15645263
Following gene: 15645260
Centisome position: 41.05
GC content: 42.16
Gene sequence:
>453_bases ATGCATCAAAACAATAAAACTTTTTTACCCAGCCAATCCGCTCACCTCTCTAAAATCATTCTTTTTTTAAACACCGGCTT TTTAGCCTATCTGTTAAGCGCTTGTGGGGCGAATGTGCCTATAGAAGAAGTGTTGGTTAAAGATCCTAAAGAGACCAAAG CCCAAGAAGTCGCCAGAGAAGAAAAGGCTATCCAGCAAGAAAACGCCACTATTGATGCGCGCACCACGCCTTTAATCAAT CGTTTCACTAATTATAGCGCTTATGGCTCTTTAAACGGCTTTTACAATTCAGTGGATAATCTCAATTCGCCCATGCAAAA CGGGATGTATGGAGGCTATTACATGCCTTATTATTACATGCCCTATGGTTTCATGCCTTATGGGTCAGGTCTTATGCCTT ATGGGCCTTATGGGTATGGAGCGCCTGGATACTTCCCTTACGCTTTTTATTGA
Upstream 100 bases:
>100_bases AATGAAAAACAAAATTAAAATGGAATAGCCACAAAAGCTTAATGAATATTAAATTAAAAACATGTTAATCTTTAGTTATT TTTAAAATTTAGGAAATCCC
Downstream 100 bases:
>100_bases TTGAGTGGCTTTAGAAAGCGTGGTGGTGTTGGTGTTTTTACTCAAACACGCTTATATTTTCTAATGGTTATTTCTAACAT GCTAGGGTGGTGTGATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MHQNNKTFLPSQSAHLSKIILFLNTGFLAYLLSACGANVPIEEVLVKDPKETKAQEVAREEKAIQQENATIDARTTPLIN RFTNYSAYGSLNGFYNSVDNLNSPMQNGMYGGYYMPYYYMPYGFMPYGSGLMPYGPYGYGAPGYFPYAFY
Sequences:
>Translated_150_residues MHQNNKTFLPSQSAHLSKIILFLNTGFLAYLLSACGANVPIEEVLVKDPKETKAQEVAREEKAIQQENATIDARTTPLIN RFTNYSAYGSLNGFYNSVDNLNSPMQNGMYGGYYMPYYYMPYGFMPYGSGLMPYGPYGYGAPGYFPYAFY >Mature_150_residues MHQNNKTFLPSQSAHLSKIILFLNTGFLAYLLSACGANVPIEEVLVKDPKETKAQEVAREEKAIQQENATIDARTTPLIN RFTNYSAYGSLNGFYNSVDNLNSPMQNGMYGGYYMPYYYMPYGFMPYGSGLMPYGPYGYGAPGYFPYAFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16894; Mature: 16894
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQNNKTFLPSQSAHLSKIILFLNTGFLAYLLSACGANVPIEEVLVKDPKETKAQEVARE CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH EKAIQQENATIDARTTPLINRFTNYSAYGSLNGFYNSVDNLNSPMQNGMYGGYYMPYYYM HHHHHHHCCEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCEECCEEEC PYGFMPYGSGLMPYGPYGYGAPGYFPYAFY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHQNNKTFLPSQSAHLSKIILFLNTGFLAYLLSACGANVPIEEVLVKDPKETKAQEVARE CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH EKAIQQENATIDARTTPLINRFTNYSAYGSLNGFYNSVDNLNSPMQNGMYGGYYMPYYYM HHHHHHHCCEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCEECCEEEC PYGFMPYGSGLMPYGPYGYGAPGYFPYAFY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA