| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645208
GI number: 15645208
Start: 613978
End: 614859
Strand: Reverse
Name: Not Available
Synonym: HP0583
Alternate gene names: NA
Gene position: 614859-613978 (Counterclockwise)
Preceding gene: 15645209
Following gene: 15645207
Centisome position: 36.86
GC content: 36.17
Gene sequence:
>882_bases ATGAGATTGTTATTCTTGTTATTGAGTGCTGCTTTTATGTTACTGGCTGAAGAAAAAATATCTTTAAACGATGACGCCCC CATTAAACTAGTGCATTGGCAAAATGCATTAAAAGAAGTCCAACCTGATTCAAACGCTCCAGCAACACCACCTATAAAAG CCGTGCAAACCACGCTCACTTTTGAAACGCCTTTTAACAAAACGCCTAAAATCATGGAAGTTGAAGGGCAAAAGGTGATC GTCTTAAAAAACGCTAAACTGGATTCTAAAAAAACCATGGATTTTAAAGAAGCCTCTTTGAATGCTTTAGAAATGTTTTC CTACCAAAATGACATCTACCTCTTGTCTAAAAAAGCTAAAGTGGAATTAGAAATCCAAGCTTCAAACAGCAAGGATAAAA AACGGCTCCGCTTTCTCTTTTTACCCAAAGGTTTTCATTTAGCCCCACCGCCTAACCTGAAAGAAAAATCTCAGCAAACT AACCTTGCACAAAAAGACACCAACGAGCAACCCCAAAGCCCTTTAAACACTCTAGAGTTAAAACCCCCACTAAATTTAAG CCATGCTTATAAGGCGCTAGCGGTTATTGCTGCCTTACTCTTAATATTGTATGTCATCAAAAAAAAAATTGTTCCCACAC AAGGGTCTTTTTCTGCAAAAGATTTTAAGTTAGAAATTAGCGTTTTGGGTCGTGTTGATGCGAACCATAAAATCATTTCA ATAGAAACCAATAAGGAGCGTTACTTGGTCTTACTAAGCGATAAATACGGCCTGCTTTTAGACAAAATAAGCCCAAAAAC ATCTAAAGAAGAACTGATTAAAGAAGCTGAAAATAATATAAAGAATTCAAAATTAGGAAATTTATATGCCGGAAAATTCT AA
Upstream 100 bases:
>100_bases TTGGTAAGGGTGAGGTGATGGTTTTTGAAAGGAATTTAGCCATTCGTTTGAATGAAATCCTAGATTCTAACGCCATTGTA TATTATCTCGCTAAAAATTC
Downstream 100 bases:
>100_bases ACTACAACCTGCTAAGTTAGGGAAAAATTTTGACCCTGTGGATCATTCTAACAGGAATTTTTTCTTTTCTCTCATTCTGT CTGTATTGTTACACTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRLLFLLLSAAFMLLAEEKISLNDDAPIKLVHWQNALKEVQPDSNAPATPPIKAVQTTLTFETPFNKTPKIMEVEGQKVI VLKNAKLDSKKTMDFKEASLNALEMFSYQNDIYLLSKKAKVELEIQASNSKDKKRLRFLFLPKGFHLAPPPNLKEKSQQT NLAQKDTNEQPQSPLNTLELKPPLNLSHAYKALAVIAALLLILYVIKKKIVPTQGSFSAKDFKLEISVLGRVDANHKIIS IETNKERYLVLLSDKYGLLLDKISPKTSKEELIKEAENNIKNSKLGNLYAGKF
Sequences:
>Translated_293_residues MRLLFLLLSAAFMLLAEEKISLNDDAPIKLVHWQNALKEVQPDSNAPATPPIKAVQTTLTFETPFNKTPKIMEVEGQKVI VLKNAKLDSKKTMDFKEASLNALEMFSYQNDIYLLSKKAKVELEIQASNSKDKKRLRFLFLPKGFHLAPPPNLKEKSQQT NLAQKDTNEQPQSPLNTLELKPPLNLSHAYKALAVIAALLLILYVIKKKIVPTQGSFSAKDFKLEISVLGRVDANHKIIS IETNKERYLVLLSDKYGLLLDKISPKTSKEELIKEAENNIKNSKLGNLYAGKF >Mature_293_residues MRLLFLLLSAAFMLLAEEKISLNDDAPIKLVHWQNALKEVQPDSNAPATPPIKAVQTTLTFETPFNKTPKIMEVEGQKVI VLKNAKLDSKKTMDFKEASLNALEMFSYQNDIYLLSKKAKVELEIQASNSKDKKRLRFLFLPKGFHLAPPPNLKEKSQQT NLAQKDTNEQPQSPLNTLELKPPLNLSHAYKALAVIAALLLILYVIKKKIVPTQGSFSAKDFKLEISVLGRVDANHKIIS IETNKERYLVLLSDKYGLLLDKISPKTSKEELIKEAENNIKNSKLGNLYAGKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32996; Mature: 32996
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLFLLLSAAFMLLAEEKISLNDDAPIKLVHWQNALKEVQPDSNAPATPPIKAVQTTLT CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCHHHEEEEEE FETPFNKTPKIMEVEGQKVIVLKNAKLDSKKTMDFKEASLNALEMFSYQNDIYLLSKKAK EECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHCCCCEEEEECCCE VELEIQASNSKDKKRLRFLFLPKGFHLAPPPNLKEKSQQTNLAQKDTNEQPQSPLNTLEL EEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCEEEE KPPLNLSHAYKALAVIAALLLILYVIKKKIVPTQGSFSAKDFKLEISVLGRVDANHKIIS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCEEEE IETNKERYLVLLSDKYGLLLDKISPKTSKEELIKEAENNIKNSKLGNLYAGKF EEECCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCC >Mature Secondary Structure MRLLFLLLSAAFMLLAEEKISLNDDAPIKLVHWQNALKEVQPDSNAPATPPIKAVQTTLT CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCHHHEEEEEE FETPFNKTPKIMEVEGQKVIVLKNAKLDSKKTMDFKEASLNALEMFSYQNDIYLLSKKAK EECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHCCCCEEEEECCCE VELEIQASNSKDKKRLRFLFLPKGFHLAPPPNLKEKSQQTNLAQKDTNEQPQSPLNTLEL EEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCEEEE KPPLNLSHAYKALAVIAALLLILYVIKKKIVPTQGSFSAKDFKLEISVLGRVDANHKIIS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCEEEE IETNKERYLVLLSDKYGLLLDKISPKTSKEELIKEAENNIKNSKLGNLYAGKF EEECCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA