| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645181
GI number: 15645181
Start: 590624
End: 591061
Strand: Reverse
Name: Not Available
Synonym: HP0556
Alternate gene names: NA
Gene position: 591061-590624 (Counterclockwise)
Preceding gene: 15645182
Following gene: 15645175
Centisome position: 35.44
GC content: 38.13
Gene sequence:
>438_bases ATGGTTACACATGAAAAAATCAAAAGCCGCTTTTCTAGGAATTGGTCTTTAAGGAATAGGGGTAGGCATTTTGCATCTGC AAGCGTGTATTTTTTCTCACTTCTTGTCATTACAGCTGTTAATAGAAGTAGTGCAGTTGCTTGGTTATTGATGCCTGAAC ATTTGATTGGGTGGTTTTTGATTTCTTTTAGTGGGGAATTTGTAGCAGACATGGCGTTTGGCAAAAAAAGTAAGATCTTT AAAACCCGCTTTGGAATTTCTATTGTGAGCGGCGTTTCACTATTGCTTGGCGCTTTACCAGCGCATTTGTTTTTTGTATG GTTTGGTTTTATTAATTGGTGGGCTGTCCTTTTTATAGAAGCGGGAGCTGGTCTATTGGTGGGCTGTGTGATACAAAAGA TTTTTTTTGGTAAATATTGGGTGGATCGCTATTATTAA
Upstream 100 bases:
>100_bases TGAAAAGACAATCATCATGATCAGAGTATTGAATGAAAGCATTCTTATTTTACAATACAAAAGTTAGGTCTAATGGTATT TTAAAAAAGAAAGAAATCCT
Downstream 100 bases:
>100_bases GGCCCTCTTTTTTTCAAGCCTGAAAGCGGATTTTCTTAATATTCCAATCAATTGGATAAGGGTTACCCCTACTTAAGGCA TCGCATCAAAAACCACGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVTHEKIKSRFSRNWSLRNRGRHFASASVYFFSLLVITAVNRSSAVAWLLMPEHLIGWFLISFSGEFVADMAFGKKSKIF KTRFGISIVSGVSLLLGALPAHLFFVWFGFINWWAVLFIEAGAGLLVGCVIQKIFFGKYWVDRYY
Sequences:
>Translated_145_residues MVTHEKIKSRFSRNWSLRNRGRHFASASVYFFSLLVITAVNRSSAVAWLLMPEHLIGWFLISFSGEFVADMAFGKKSKIF KTRFGISIVSGVSLLLGALPAHLFFVWFGFINWWAVLFIEAGAGLLVGCVIQKIFFGKYWVDRYY >Mature_145_residues MVTHEKIKSRFSRNWSLRNRGRHFASASVYFFSLLVITAVNRSSAVAWLLMPEHLIGWFLISFSGEFVADMAFGKKSKIF KTRFGISIVSGVSLLLGALPAHLFFVWFGFINWWAVLFIEAGAGLLVGCVIQKIFFGKYWVDRYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16613; Mature: 16613
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTHEKIKSRFSRNWSLRNRGRHFASASVYFFSLLVITAVNRSSAVAWLLMPEHLIGWFL CCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH ISFSGEFVADMAFGKKSKIFKTRFGISIVSGVSLLLGALPAHLFFVWFGFINWWAVLFIE HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAGLLVGCVIQKIFFGKYWVDRYY CCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVTHEKIKSRFSRNWSLRNRGRHFASASVYFFSLLVITAVNRSSAVAWLLMPEHLIGWFL CCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH ISFSGEFVADMAFGKKSKIFKTRFGISIVSGVSLLLGALPAHLFFVWFGFINWWAVLFIE HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAGLLVGCVIQKIFFGKYWVDRYY CCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA