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Identifier: 15645168

GI number: 15645168

Start: 573864

End: 574292

Strand: Reverse

Name: Not Available

Synonym: HP0542

Alternate gene names: NA

Gene position: 574292-573864 (Counterclockwise)

Preceding gene: 15645169

Following gene: 15645167

Centisome position: 34.43

GC content: 35.2

Gene sequence:

>429_bases
ATGAAAACGAATTTTTATAAAATTAAATTACTATTTGCTTGGTGTCTTATCATTGGCATGTTTAACGCTCCGCTTAATGC
TGACCAAAACACGGATATAAAAGATATTAGTCCTGAAGATATGGCACTAAATAGCGTGGGGCTTGTTTCTAGAGATCAAC
TAAAAATAGAGATCCCTAAAGAAACCCTAGAACAAAAAGTGGCCGTACTCAATGACTATAATGATAAGAATGTTAATATC
AAGTTTGACAACATAAGTTTAGGGAGTTTTCAACCTAATGATAATCTAGGTATCAATGCGATGTGGGGCATTCAAAATCT
TCTCATGAGCCAAATGATGGGCGATTACGGTCCAAACAATCCTTTCATGTATGGTTATGCACCAACATACTCAGATTCAT
CATTTTTACCACCGATCTTAGGGTATTAA

Upstream 100 bases:

>100_bases
AAACAAAATGCTCGATCAAAAAAATCAAAACAANAGTAACGATTGAGTGGCGTTAATGCGCTAGAATAGTGCTAAAAATA
AGAATAAAGGAGTCAAAAAT

Downstream 100 bases:

>100_bases
CTAGGGGGTATTAACATGGCAGGTACACAAGCTATATATGAATCATCTTCTGCAGGATTCTTATCGGAAATTTCCTCAAT
CATCTCAAGCACAAGTGGTG

Product: cag pathogenicity island protein (cag21)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAVLNDYNDKNVNI
KFDNISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYSDSSFLPPILGY

Sequences:

>Translated_142_residues
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAVLNDYNDKNVNI
KFDNISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYSDSSFLPPILGY
>Mature_142_residues
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAVLNDYNDKNVNI
KFDNISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYSDSSFLPPILGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16027; Mature: 16027

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCH
ETLEQKVAVLNDYNDKNVNIKFDNISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNN
HHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCC
PFMYGYAPTYSDSSFLPPILGY
CEEEECCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCH
ETLEQKVAVLNDYNDKNVNIKFDNISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNN
HHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCC
PFMYGYAPTYSDSSFLPPILGY
CEEEECCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA