| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is gltX
Identifier: 15645104
GI number: 15645104
Start: 497510
End: 498901
Strand: Reverse
Name: gltX
Synonym: HP0476
Alternate gene names: 15645104
Gene position: 498901-497510 (Counterclockwise)
Preceding gene: 15645112
Following gene: 15645100
Centisome position: 29.91
GC content: 39.3
Gene sequence:
>1392_bases ATGAGTTTGATCGTTACGCGCTTCGCTCCATCGCCCACTGGCTACCTCCACATAGGAGGCTTAAGAACAGCCATTTTCAA TTATCTTTTTGCACGAGCCAATCAAGGAAAATTTTTTTTACGCATTGAAGACACGGATTTGAGCCGTAACTCTATAGAAG CGGCTAACGCCATTATAGAAGCTTTCAAATGGGTAGGGCTAGAATACGATGGCGAAATCCTCTACCAATCCAAACGCTTT GAGATTTATAAAGAATACATTCAAAAACTCTTAGATGAAGACAAAGCCTATTATTGTTACATGAGCAAAGAAGAGTTGGA CGCTTTGAGAGAAGAGCAAAAAGCCAGGAAAGAAACCCCACGCTATGACAATCGCTATCGTGATTTTAAAGGCACGCCTC CTAAAGGCATAGAGCCTGTGGTAAGGATTAAAGTCCCCCAAAATGAGGTGATTGGTTTTAATGACGGGGTTAAAGGCGAA GTGAAAGTGAATACTAACGAATTAGACGATTTTATTATCGCCAGGAGCGATGGGACACCCACTTATAACTTTGTGGTTAC TATTGATGACGCTTTAATGGGGATTACTGATGTGATTAGAGGCGATGATCACCTTTCTAACACCCCTAAACAAATCGTTC TTTATAAGGCTTTGAATTTTAAAATCCCTAATTTTTTCCATGTGCCGATGATTTTGAATGAAGAAGGGCAAAAATTAAGC AAACGCCATGGGGCCACTAATGTGATGGACTATCAAGAAATGGGCTATCTTAAGGAAGCTTTAGTGAATTTTTTAGCGCG TTTGGGGTGGAGCTATCAGGATAAAGAGGTTTTTAGCATGCAAGAATTGCTAGAATTATTTGATCCTAAAGATTTGAATT CTTCGCCCAGTTGCTTCAGCTGGCACAAGCTTAATTGGCTCAACGCTCATTATTTAAAAAACCAAAGTGTGCAAGAATTG TTAAAACTTTTAAAGCCTTTTAGTTTTAGCGATCTCTCGCATTTAAACCCCACTCAATTGGATCGCTTGTTAGACGCTCT CAAAGAAAGATCTCAAACACTAAAAGAATTAGCCCTTAAAATAGATGAGGTTTTAATCGCCCCTGTGGAGTATGAAGAAA AGGTTTTTAAAAAACTCAATCAAGCGCTCGTTATGCCCTTGTTAGAAAAGTTTAAGCTAGAATTAAACAAAGCCAATTTC AACGATGAAAGCGCGCTAGAAAACGCCATGCGCCAAATCATTGAAGAAGAAAAGATTAAAGCGGGTAGTTTTATGCAGCC TTTAAGATTGGCCCTTTTGGGTAAGGGAGGCGGGATAGGCCTTAAAGAAGCGCTTTTTATTTTAGGCAAAACAGAGAGCG TCAAAAGAATAGAGGATTTTTTGAAAAACTAA
Upstream 100 bases:
>100_bases AATAATCTCAATCATACACTAATTTTAATAGAAAAAAGTGAAACCATTTTTAAGCCATTTTTGAATACAATAAGAGTATT TTATTTTTAAGGTTAGAACA
Downstream 100 bases:
>100_bases AAAATTGGCTCTGTTTTCATTGGGTATTAAAATAAAAGAGTTTGATTTTAGCGGTTGTTAAGCAACTCCTTTTGAAAAAT AAGAGGGTTTTAAGAGGAAA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 1; GluRS 1 [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MSLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIIEAFKWVGLEYDGEILYQSKRF EIYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKETPRYDNRYRDFKGTPPKGIEPVVRIKVPQNEVIGFNDGVKGE VKVNTNELDDFIIARSDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEEGQKLS KRHGATNVMDYQEMGYLKEALVNFLARLGWSYQDKEVFSMQELLELFDPKDLNSSPSCFSWHKLNWLNAHYLKNQSVQEL LKLLKPFSFSDLSHLNPTQLDRLLDALKERSQTLKELALKIDEVLIAPVEYEEKVFKKLNQALVMPLLEKFKLELNKANF NDESALENAMRQIIEEEKIKAGSFMQPLRLALLGKGGGIGLKEALFILGKTESVKRIEDFLKN
Sequences:
>Translated_463_residues MSLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIIEAFKWVGLEYDGEILYQSKRF EIYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKETPRYDNRYRDFKGTPPKGIEPVVRIKVPQNEVIGFNDGVKGE VKVNTNELDDFIIARSDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEEGQKLS KRHGATNVMDYQEMGYLKEALVNFLARLGWSYQDKEVFSMQELLELFDPKDLNSSPSCFSWHKLNWLNAHYLKNQSVQEL LKLLKPFSFSDLSHLNPTQLDRLLDALKERSQTLKELALKIDEVLIAPVEYEEKVFKKLNQALVMPLLEKFKLELNKANF NDESALENAMRQIIEEEKIKAGSFMQPLRLALLGKGGGIGLKEALFILGKTESVKRIEDFLKN >Mature_462_residues SLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIIEAFKWVGLEYDGEILYQSKRFE IYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKETPRYDNRYRDFKGTPPKGIEPVVRIKVPQNEVIGFNDGVKGEV KVNTNELDDFIIARSDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEEGQKLSK RHGATNVMDYQEMGYLKEALVNFLARLGWSYQDKEVFSMQELLELFDPKDLNSSPSCFSWHKLNWLNAHYLKNQSVQELL KLLKPFSFSDLSHLNPTQLDRLLDALKERSQTLKELALKIDEVLIAPVEYEEKVFKKLNQALVMPLLEKFKLELNKANFN DESALENAMRQIIEEEKIKAGSFMQPLRLALLGKGGGIGLKEALFILGKTESVKRIEDFLKN
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=494, Percent_Identity=30.3643724696356, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI62241042, Length=256, Percent_Identity=24.609375, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4826960, Length=287, Percent_Identity=26.1324041811847, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1788743, Length=461, Percent_Identity=42.9501084598698, Blast_Score=369, Evalue=1e-103, Organism=Escherichia coli, GI226510925, Length=282, Percent_Identity=34.0425531914894, Blast_Score=168, Evalue=7e-43, Organism=Escherichia coli, GI1786895, Length=213, Percent_Identity=26.2910798122066, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71993394, Length=490, Percent_Identity=33.0612244897959, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17511007, Length=255, Percent_Identity=25.0980392156863, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17543332, Length=363, Percent_Identity=24.5179063360882, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324540, Length=490, Percent_Identity=33.469387755102, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6321192, Length=218, Percent_Identity=29.3577981651376, Blast_Score=90, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6324742, Length=128, Percent_Identity=30.46875, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24665321, Length=492, Percent_Identity=33.5365853658537, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI24649466, Length=250, Percent_Identity=26.4, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI17864488, Length=289, Percent_Identity=25.9515570934256, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 53352; Mature: 53221
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIIE CCEEEEECCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH AFKWVGLEYDGEILYQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKETP HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCC RYDNRYRDFKGTPPKGIEPVVRIKVPQNEVIGFNDGVKGEVKVNTNELDDFIIARSDGTP CCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCEEEEECCCCCCCEEEEECCCCC TYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEEGQKLS EEEEEEEECHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCEEECCEEECCCHHHHH KRHGATNVMDYQEMGYLKEALVNFLARLGWSYQDKEVFSMQELLELFDPKDLNSSPSCFS HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCE WHKLNWLNAHYLKNQSVQELLKLLKPFSFSDLSHLNPTQLDRLLDALKERSQTLKELALK ECCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IDEVLIAPVEYEEKVFKKLNQALVMPLLEKFKLELNKANFNDESALENAMRQIIEEEKIK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC AGSFMQPLRLALLGKGGGIGLKEALFILGKTESVKRIEDFLKN CCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIIE CEEEEECCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH AFKWVGLEYDGEILYQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKETP HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCC RYDNRYRDFKGTPPKGIEPVVRIKVPQNEVIGFNDGVKGEVKVNTNELDDFIIARSDGTP CCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCEEEEECCCCCCCEEEEECCCCC TYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEEGQKLS EEEEEEEECHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCEEECCEEECCCHHHHH KRHGATNVMDYQEMGYLKEALVNFLARLGWSYQDKEVFSMQELLELFDPKDLNSSPSCFS HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCE WHKLNWLNAHYLKNQSVQELLKLLKPFSFSDLSHLNPTQLDRLLDALKERSQTLKELALK ECCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IDEVLIAPVEYEEKVFKKLNQALVMPLLEKFKLELNKANFNDESALENAMRQIIEEEKIK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC AGSFMQPLRLALLGKGGGIGLKEALFILGKTESVKRIEDFLKN CCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA