| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645093
GI number: 15645093
Start: 485990
End: 487885
Strand: Reverse
Name: Not Available
Synonym: HP0465
Alternate gene names: NA
Gene position: 487885-485990 (Counterclockwise)
Preceding gene: 15645094
Following gene: 15645092
Centisome position: 29.25
GC content: 36.02
Gene sequence:
>1896_bases ATGCCCTTTTTAAAAGCCCTAGAATCTTTTGATGCGCCCTTTTTAGAAAAAGAAATTTCAAAACGTTTTAGGGATAATTT AGTTTTTTTCAAATCTTATAATCCTAATCTTTTTAACGCTCTCAATACGCCTTTTAAAAATTACCAATTGCTTTTTGAAA AAAACCACTTCAATCTCTTACACACGCCCACAAACGCTTTAAGCTACCCTAAAAATCAAATGATAGAAATCGCTTTTAAC ATGGCTTCTAACCCCTTGAATAATCCCAAATGGTCATTAGACAATAACCACCTCTCTTTACATTATTTAAAATCTCAAAA TAACCCCAAACTCCCCCTAACCCTTAAAGCCACGCATGCGATCTCAAATTTTTTAAATAACCATCAAACGCCTTGCTCTT TAAAGAAATTCTTACCCCCTACCATGATTTATGGCGTTTTAGACGGCTTGTTTTTGGCCATTTTACAGGCTCAAAATTAC CGCTTCCATTCGCTTTATTTGTTTGAAGAAAATTTAGATTTGTTTAAAATCAGTTGTTATTTTGTGCGTTATGAAGATTT GATTACAAAAGGGGCTAAACTCTTTATTCAAGGGTTTTTTAACCCCAATGAATTGAAAATGGATTTTTTGAAACGCCCTG TTACGCATTCTTTTTTAAAATTAGAAATTATGCCCTATAAAAGCGCTTTTAATTTGCGCATGCGAGAAAACATTCAAAGC TATTACAAACAAGCTTTAAGGGGTTGGGGGAGTTTTGAAGATGAATTGCTAGGGCTAAAGAACACGCTCAAAAATTTACC CCTATACCAAACCCTAAAGATTAAACCTAAAAAGATTAACGCCCCCATTTGCGTGGTGGGTAATGGGCCAAGCTTGGATT TATTGCTAGATTTTTTAAAAGAAAATGAAAAAAATTGCATCATTTTTTCATGCGGAACCGCTTTAAAGCCTTTAAAAACG CATGGCGTTAAAGTGGATTTTCAGATAGAAGTGGAGCGCATAGATTATCTTAAGGAAGTTTTAGAAAACGCCCCCCTAGA AGACACCCCCTTAATGGGGGCCAACATGCTCAATCCTAACGCTTTTAATGTAGCTAAAGAAGCGTTGATGTTTATGCGTG GGGGGAGCGCTTGCGCGTATATAAGCCCTTTAAGTATAGAATACGCAGCGCCTCTTGTGGGTAATGCCGGGGTGGCTTTA GCGGGTTTGATGAGCGATGAAATCTATTTGTGCGCTTTAGATTGCGCTTATATCAAAGGGTTTAAAAAGCACGCTCAAAA TTCCTATTATGGGGACGAAAAAGAAATTGACACTTCGTCTTTAATCAGCGTAGAGGGTAATTTTAAAGGTTATGAAACTT TTAGCGACTCGCTCTTTTTGCTCTCTAAAGAAAGGATTGAAGAAGCCCTTAATCATTACCAGCCTAAAAAAGTCTATAAT TTAAGCTATGGGGCGAAAATCAAGCATGCTGTTAGCCTTAATTACTCTCAAGTAAAATTGAAACATTCCAACAAACAAGA AGCTATCGCTCGCATTAAAAGCATGTTTAATCCCCCCAATAACCATGCTAAGGATTTAAAAAATCTACAAAAAAATCTTA TGAATTTTAAAGAAAGTTTTTTCACGCATTTAAACACGCCTTGTAAAACCAAGCAAGAAATATTTGAATGGGTGGATAGT TTGAGTGGGTTTTGCCAAACAATTAGCGCTAAAACCCCCACTATAGGCATTTTATTTGAAGGGAGTGTCGCTCATATTTT ACAAAGCGTTCTAATCGTTTCATTGCATCTTAACGAAAATGAGCTGACGCATTTTATCAAATTCTCTCAAAACGCCTTAA AACAATTCCTTAAAGAAGCTTGTTTGTTATTACAAATGCAACTCAAACAACCATGA
Upstream 100 bases:
>100_bases CGAACAAGATTTTATCTCTTTGAAAAAGATCGCCATCGCTTCCCAACTCTTAGAAAATGATTTAAAAGACTCCTAAGGGT CTTGTGAAAAAGGCTATTGA
Downstream 100 bases:
>100_bases TTTTTATTTTTACATTATAATATCAACCTTAAATCTAAGGGGTGTGCATGCCATACAATGAAATCACAAGGGTTCAAATC CCTGCCTTAATGCATTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MPFLKALESFDAPFLEKEISKRFRDNLVFFKSYNPNLFNALNTPFKNYQLLFEKNHFNLLHTPTNALSYPKNQMIEIAFN MASNPLNNPKWSLDNNHLSLHYLKSQNNPKLPLTLKATHAISNFLNNHQTPCSLKKFLPPTMIYGVLDGLFLAILQAQNY RFHSLYLFEENLDLFKISCYFVRYEDLITKGAKLFIQGFFNPNELKMDFLKRPVTHSFLKLEIMPYKSAFNLRMRENIQS YYKQALRGWGSFEDELLGLKNTLKNLPLYQTLKIKPKKINAPICVVGNGPSLDLLLDFLKENEKNCIIFSCGTALKPLKT HGVKVDFQIEVERIDYLKEVLENAPLEDTPLMGANMLNPNAFNVAKEALMFMRGGSACAYISPLSIEYAAPLVGNAGVAL AGLMSDEIYLCALDCAYIKGFKKHAQNSYYGDEKEIDTSSLISVEGNFKGYETFSDSLFLLSKERIEEALNHYQPKKVYN LSYGAKIKHAVSLNYSQVKLKHSNKQEAIARIKSMFNPPNNHAKDLKNLQKNLMNFKESFFTHLNTPCKTKQEIFEWVDS LSGFCQTISAKTPTIGILFEGSVAHILQSVLIVSLHLNENELTHFIKFSQNALKQFLKEACLLLQMQLKQP
Sequences:
>Translated_631_residues MPFLKALESFDAPFLEKEISKRFRDNLVFFKSYNPNLFNALNTPFKNYQLLFEKNHFNLLHTPTNALSYPKNQMIEIAFN MASNPLNNPKWSLDNNHLSLHYLKSQNNPKLPLTLKATHAISNFLNNHQTPCSLKKFLPPTMIYGVLDGLFLAILQAQNY RFHSLYLFEENLDLFKISCYFVRYEDLITKGAKLFIQGFFNPNELKMDFLKRPVTHSFLKLEIMPYKSAFNLRMRENIQS YYKQALRGWGSFEDELLGLKNTLKNLPLYQTLKIKPKKINAPICVVGNGPSLDLLLDFLKENEKNCIIFSCGTALKPLKT HGVKVDFQIEVERIDYLKEVLENAPLEDTPLMGANMLNPNAFNVAKEALMFMRGGSACAYISPLSIEYAAPLVGNAGVAL AGLMSDEIYLCALDCAYIKGFKKHAQNSYYGDEKEIDTSSLISVEGNFKGYETFSDSLFLLSKERIEEALNHYQPKKVYN LSYGAKIKHAVSLNYSQVKLKHSNKQEAIARIKSMFNPPNNHAKDLKNLQKNLMNFKESFFTHLNTPCKTKQEIFEWVDS LSGFCQTISAKTPTIGILFEGSVAHILQSVLIVSLHLNENELTHFIKFSQNALKQFLKEACLLLQMQLKQP >Mature_630_residues PFLKALESFDAPFLEKEISKRFRDNLVFFKSYNPNLFNALNTPFKNYQLLFEKNHFNLLHTPTNALSYPKNQMIEIAFNM ASNPLNNPKWSLDNNHLSLHYLKSQNNPKLPLTLKATHAISNFLNNHQTPCSLKKFLPPTMIYGVLDGLFLAILQAQNYR FHSLYLFEENLDLFKISCYFVRYEDLITKGAKLFIQGFFNPNELKMDFLKRPVTHSFLKLEIMPYKSAFNLRMRENIQSY YKQALRGWGSFEDELLGLKNTLKNLPLYQTLKIKPKKINAPICVVGNGPSLDLLLDFLKENEKNCIIFSCGTALKPLKTH GVKVDFQIEVERIDYLKEVLENAPLEDTPLMGANMLNPNAFNVAKEALMFMRGGSACAYISPLSIEYAAPLVGNAGVALA GLMSDEIYLCALDCAYIKGFKKHAQNSYYGDEKEIDTSSLISVEGNFKGYETFSDSLFLLSKERIEEALNHYQPKKVYNL SYGAKIKHAVSLNYSQVKLKHSNKQEAIARIKSMFNPPNNHAKDLKNLQKNLMNFKESFFTHLNTPCKTKQEIFEWVDSL SGFCQTISAKTPTIGILFEGSVAHILQSVLIVSLHLNENELTHFIKFSQNALKQFLKEACLLLQMQLKQP
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72173; Mature: 72041
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLKALESFDAPFLEKEISKRFRDNLVFFKSYNPNLFNALNTPFKNYQLLFEKNHFNLL CCHHHHHHHCCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHCCCCCCEEEEEECCCCEEE HTPTNALSYPKNQMIEIAFNMASNPLNNPKWSLDNNHLSLHYLKSQNNPKLPLTLKATHA ECCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEHHHH ISNFLNNHQTPCSLKKFLPPTMIYGVLDGLFLAILQAQNYRFHSLYLFEENLDLFKISCY HHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEE FVRYEDLITKGAKLFIQGFFNPNELKMDFLKRPVTHSFLKLEIMPYKSAFNLRMRENIQS EEEHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHCHHHHHHHHH YYKQALRGWGSFEDELLGLKNTLKNLPLYQTLKIKPKKINAPICVVGNGPSLDLLLDFLK HHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHH ENEKNCIIFSCGTALKPLKTHGVKVDFQIEVERIDYLKEVLENAPLEDTPLMGANMLNPN CCCCCEEEEECCCCCCCHHHCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AFNVAKEALMFMRGGSACAYISPLSIEYAAPLVGNAGVALAGLMSDEIYLCALDCAYIKG HHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCHHHHHHCCCCEEEEEEHHHHHHH FKKHAQNSYYGDEKEIDTSSLISVEGNFKGYETFSDSLFLLSKERIEEALNHYQPKKVYN HHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE LSYGAKIKHAVSLNYSQVKLKHSNKQEAIARIKSMFNPPNNHAKDLKNLQKNLMNFKESF CCCCCEEEEEEECCHHEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH FTHLNTPCKTKQEIFEWVDSLSGFCQTISAKTPTIGILFEGSVAHILQSVLIVSLHLNEN HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHEEEECCCH ELTHFIKFSQNALKQFLKEACLLLQMQLKQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PFLKALESFDAPFLEKEISKRFRDNLVFFKSYNPNLFNALNTPFKNYQLLFEKNHFNLL CHHHHHHHCCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHCCCCCCEEEEEECCCCEEE HTPTNALSYPKNQMIEIAFNMASNPLNNPKWSLDNNHLSLHYLKSQNNPKLPLTLKATHA ECCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEHHHH ISNFLNNHQTPCSLKKFLPPTMIYGVLDGLFLAILQAQNYRFHSLYLFEENLDLFKISCY HHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEE FVRYEDLITKGAKLFIQGFFNPNELKMDFLKRPVTHSFLKLEIMPYKSAFNLRMRENIQS EEEHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHCHHHHHHHHH YYKQALRGWGSFEDELLGLKNTLKNLPLYQTLKIKPKKINAPICVVGNGPSLDLLLDFLK HHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHH ENEKNCIIFSCGTALKPLKTHGVKVDFQIEVERIDYLKEVLENAPLEDTPLMGANMLNPN CCCCCEEEEECCCCCCCHHHCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AFNVAKEALMFMRGGSACAYISPLSIEYAAPLVGNAGVALAGLMSDEIYLCALDCAYIKG HHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCHHHHHHCCCCEEEEEEHHHHHHH FKKHAQNSYYGDEKEIDTSSLISVEGNFKGYETFSDSLFLLSKERIEEALNHYQPKKVYN HHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE LSYGAKIKHAVSLNYSQVKLKHSNKQEAIARIKSMFNPPNNHAKDLKNLQKNLMNFKESF CCCCCEEEEEEECCHHEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH FTHLNTPCKTKQEIFEWVDSLSGFCQTISAKTPTIGILFEGSVAHILQSVLIVSLHLNEN HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHEEEECCCH ELTHFIKFSQNALKQFLKEACLLLQMQLKQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA