| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644950
GI number: 15644950
Start: 337756
End: 339273
Strand: Reverse
Name: Not Available
Synonym: HP0322
Alternate gene names: NA
Gene position: 339273-337756 (Counterclockwise)
Preceding gene: 15644952
Following gene: 15644949
Centisome position: 20.34
GC content: 37.42
Gene sequence:
>1518_bases ATGAAAATGATTCTATTCAACCAAAACCCCATGATCACAAAGCTGCTTGAGAGTGTCTCTAAGAAATTAGAATTGCCTAT AGAAAATTTTAACCATTATCAAGAGCTGTCCGCACGCCTTAAAGAAAATCAGGAATGGCTTTTGATAGCCGATGATGAAT GTTTGGAAAAACTAGACCAAGTGGATTGGCTAGAATTAAAAGAAACCATCTCTCAAAATAAAAACAGCGTGTGTATGTAT AAAAAAGGCAATGAAGCGCAGCCCTTTTTAGAGGGCTTTGAGGTGAAAATCAAAAAACCTTTTTTACCCACTGAAATGTT GAAAGTCCTTCAAAAAAAGCTTGGTTCTAACGCAAGCGAGCTAGAACCTAGCCAGAATTTAGACCCAACTCAAGAAGTTT TAGAAACCAATTGGGACGAATTAGAAAATTTAGGCGATTTAGAAGCCCTAGTGCAAGAAGAGCCTAACAATGAAGAGCAA CTGCTCCCCACTTTAAACGATCAAGAAGAAAAAGAAGAGGTTAAAGAAGAAGAAAAAGAAGAGGTTAAAGAAGAAGAAAA AGAAGAGGTTAAAGAAGAAGAAAAAGAAGAGGTTAAAGAAACTCCCCAAGAAGAAAAAAAGCCTAAAGATGATGAAACGC AAGAGGGTGAAACTCTCAAAGATAAAGAAGTTTCTAAAGAGTTGGAAGCACCCCAAGAATTAGAAATCCCTAAAGAAGAA ACGCAAGAACAAGATCCAATCAAAGAAGAAACGCAAGAAAATAAGGAGGAAAAACAAGAAAAAACACAAGATTCCCCAAG TGCACAAGAATTAGAGGCCATGCAAGAATTAGTCAAAGAAATCCAAGAAAACTCTAACGGCCAAGAGAATAAAGAAAAAA CGCAAGAAAGCGCAGAAATTCCACAAGATAAAGAAATCCAAGAAGTTGTTACCGAAAAAACCCAAGCGCAAGAATTAGAA GTTCCTAAAGAAAAAACGCAAGAAAGTGCAGAAGCTCTCCAAGAAACCCAAGCGCACGAGTTAGAAAAACAAGAAATCGC AGAAACCCCGCAAGATGTAGAAATCCCCCAATCACAAGATAAAGAAGTGCAAGAATTAGAAATCCCTAAAGAAGAAACCC AAGAAAATACAGAAACACCGCAAGATGTAGAAACACCGCAAGAAAAAGAAACCCAAGAAGATCATTACGAAAGCATTGAA GACATTCCTGAGCCGGTGATGGCTAAAGCGATGGGGGAAGAATTGCCCTTTTTGAATGAAGCCGTTGCAAAAATTCCTAA TAATGAGAACGACACAGAAACCCCTAAAGAGAGCGTTACAGAAACCTCCAAGAATGAGAACAACACAGAAACCCCGCAAG AAAAAGAAGAAAGCGATAAAACTTCTAGCCCCCTAGAATTGCGCTTGAATTTGCAAGATTTATTAAAAAGCCTGAATCAA GAGTCCTTAAAAAGCCTTTTAGAAAACAAAACCTTAAGCATTAAAATCACTTTAGAGGATAAAAAACCTAATGCATAA
Upstream 100 bases:
>100_bases ACCAACCAAGTGGATTTTTGATTATAATAAAAGATTTAAAAAAAGCGATAAAATGGATAGGCTTAAAGAAGCGTTTCTTA TCAAATAAGGAGTCCCTAAA
Downstream 100 bases:
>100_bases TGATTTTAATTTACTCATCCTTTCAGGCCCTAGCGGAGCGGGTAAAAGCACCCTTACAAAGTATTTGCAAGAAAAAATCC CAAAAACCCATTTTTCCCTT
Product: poly E-rich protein
Products: NA
Alternate protein names: PolyE-Rich Protein
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MKMILFNQNPMITKLLESVSKKLELPIENFNHYQELSARLKENQEWLLIADDECLEKLDQVDWLELKETISQNKNSVCMY KKGNEAQPFLEGFEVKIKKPFLPTEMLKVLQKKLGSNASELEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQ LLPTLNDQEEKEEVKEEEKEEVKEEEKEEVKEEEKEEVKETPQEEKKPKDDETQEGETLKDKEVSKELEAPQELEIPKEE TQEQDPIKEETQENKEEKQEKTQDSPSAQELEAMQELVKEIQENSNGQENKEKTQESAEIPQDKEIQEVVTEKTQAQELE VPKEKTQESAEALQETQAHELEKQEIAETPQDVEIPQSQDKEVQELEIPKEETQENTETPQDVETPQEKETQEDHYESIE DIPEPVMAKAMGEELPFLNEAVAKIPNNENDTETPKESVTETSKNENNTETPQEKEESDKTSSPLELRLNLQDLLKSLNQ ESLKSLLENKTLSIKITLEDKKPNA
Sequences:
>Translated_505_residues MKMILFNQNPMITKLLESVSKKLELPIENFNHYQELSARLKENQEWLLIADDECLEKLDQVDWLELKETISQNKNSVCMY KKGNEAQPFLEGFEVKIKKPFLPTEMLKVLQKKLGSNASELEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQ LLPTLNDQEEKEEVKEEEKEEVKEEEKEEVKEEEKEEVKETPQEEKKPKDDETQEGETLKDKEVSKELEAPQELEIPKEE TQEQDPIKEETQENKEEKQEKTQDSPSAQELEAMQELVKEIQENSNGQENKEKTQESAEIPQDKEIQEVVTEKTQAQELE VPKEKTQESAEALQETQAHELEKQEIAETPQDVEIPQSQDKEVQELEIPKEETQENTETPQDVETPQEKETQEDHYESIE DIPEPVMAKAMGEELPFLNEAVAKIPNNENDTETPKESVTETSKNENNTETPQEKEESDKTSSPLELRLNLQDLLKSLNQ ESLKSLLENKTLSIKITLEDKKPNA >Mature_505_residues MKMILFNQNPMITKLLESVSKKLELPIENFNHYQELSARLKENQEWLLIADDECLEKLDQVDWLELKETISQNKNSVCMY KKGNEAQPFLEGFEVKIKKPFLPTEMLKVLQKKLGSNASELEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQ LLPTLNDQEEKEEVKEEEKEEVKEEEKEEVKEEEKEEVKETPQEEKKPKDDETQEGETLKDKEVSKELEAPQELEIPKEE TQEQDPIKEETQENKEEKQEKTQDSPSAQELEAMQELVKEIQENSNGQENKEKTQESAEIPQDKEIQEVVTEKTQAQELE VPKEKTQESAEALQETQAHELEKQEIAETPQDVEIPQSQDKEVQELEIPKEETQENTETPQDVETPQEKETQEDHYESIE DIPEPVMAKAMGEELPFLNEAVAKIPNNENDTETPKESVTETSKNENNTETPQEKEESDKTSSPLELRLNLQDLLKSLNQ ESLKSLLENKTLSIKITLEDKKPNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58470; Mature: 58470
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMILFNQNPMITKLLESVSKKLELPIENFNHYQELSARLKENQEWLLIADDECLEKLDQ CEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHC VDWLELKETISQNKNSVCMYKKGNEAQPFLEGFEVKIKKPFLPTEMLKVLQKKLGSNASE CHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCEEECCCCCCHHHHHHHHHHHCCCHHH LEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQLLPTLNDQEEKEEVKEEEKE CCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHH EVKEEEKEEVKEEEKEEVKETPQEEKKPKDDETQEGETLKDKEVSKELEAPQELEIPKEE HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCHHH TQEQDPIKEETQENKEEKQEKTQDSPSAQELEAMQELVKEIQENSNGQENKEKTQESAEI HHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC PQDKEIQEVVTEKTQAQELEVPKEKTQESAEALQETQAHELEKQEIAETPQDVEIPQSQD CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC KEVQELEIPKEETQENTETPQDVETPQEKETQEDHYESIEDIPEPVMAKAMGEELPFLNE CHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH AVAKIPNNENDTETPKESVTETSKNENNTETPQEKEESDKTSSPLELRLNLQDLLKSLNQ HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEECHHHHHHHHCH ESLKSLLENKTLSIKITLEDKKPNA HHHHHHHCCCCEEEEEEEECCCCCC >Mature Secondary Structure MKMILFNQNPMITKLLESVSKKLELPIENFNHYQELSARLKENQEWLLIADDECLEKLDQ CEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHC VDWLELKETISQNKNSVCMYKKGNEAQPFLEGFEVKIKKPFLPTEMLKVLQKKLGSNASE CHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCEEECCCCCCHHHHHHHHHHHCCCHHH LEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQLLPTLNDQEEKEEVKEEEKE CCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHH EVKEEEKEEVKEEEKEEVKETPQEEKKPKDDETQEGETLKDKEVSKELEAPQELEIPKEE HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCHHH TQEQDPIKEETQENKEEKQEKTQDSPSAQELEAMQELVKEIQENSNGQENKEKTQESAEI HHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC PQDKEIQEVVTEKTQAQELEVPKEKTQESAEALQETQAHELEKQEIAETPQDVEIPQSQD CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC KEVQELEIPKEETQENTETPQDVETPQEKETQEDHYESIEDIPEPVMAKAMGEELPFLNE CHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH AVAKIPNNENDTETPKESVTETSKNENNTETPQEKEESDKTSSPLELRLNLQDLLKSLNQ HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEECHHHHHHHHCH ESLKSLLENKTLSIKITLEDKKPNA HHHHHHHCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA