| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644834
GI number: 15644834
Start: 209265
End: 211646
Strand: Reverse
Name: Not Available
Synonym: HP0205
Alternate gene names: NA
Gene position: 211646-209265 (Counterclockwise)
Preceding gene: 15644835
Following gene: 15644833
Centisome position: 12.69
GC content: 32.28
Gene sequence:
>2382_bases TTGAGCGAGCTTGTAACTGAATATGCCAACGCAACCAACAATCTGCTTTTCAAAGAATTAATCAAACATGTAAGCGGTAA TAGCGAAGGGATTAAAAATTTTTGTCAGTGTGTCAAAGAAATCAAAAAGTGCAATACGCCTAATAAAAAATACAACTCAG ATGAATTTTTTATCATGGGGAAACACAAACAAAATCAATTAGCAAAAATTTATTCTTATTTTAAAAAACTTAGTGAAGGT GAAATCAAACCACAAAATGAAGACATCTTAAAAAAGCTAAAAAGTTTAGATGAAATTTTTAAGACTACCGACTTTACAAA ATTCACACCAGAAACTGAAGTGAAGGACATTATTAAAGAAATAGATGAAAAATACCCTATCAATGAAAATTTTAAACAGC AATTTAGAACATTCCGGTTAAATATAGGCAACCTTAAAAAGAAAATTAAAAATTCTTTAAAATACCTTGAAAAAACAAGA AAAAATTTTGAGCGAAAAAAAGAGTCGCTGATCCGAGAGATTGAATATTACTGCAAAAATCAAAAAACGCTAGAGTTTGA TTATGATGTCTTGCTGGATAATATCCAACAAATATGCAAAAAATATATAGCAAGCCATGTTGTTAATGATGCGTCTAAAG ATATTAAATCCATGATGTGTCAGTTTTATTTGGAAAAAATAGACTTATTATTCAATTCAGAAATCGAACAATACAGATAC AGTGATTTTCTTGAATCAGCAAGAAAATTTCTGTGGGAAGACATAAAAACTTTAGATGAAAAGAGTGGCGTTCATTTGTT CCCTAAAAATATTGGTGAAATCAAGGATAAATTTGAAACAAACAAGGAAAAATTCAAACAAAGCAAAAACTATTCTGAGT TCGCAGAATATTGCCGAGAGTGTAACCCTTATACAGCGTTTCAAAACTTAAGAAATAAAGTTCAATTCCCTTTAAGCGGT GGTTTATCTTATAAGTCTTACAAACTCGTGCCAACCATGAAAGAATACAAAGAGCCAAAAATTACAGATAACGACCTTAA GACTGCATTATTCACTCTCTTTGATTATTCTTCCCCTTCTGAATTTGACCAATGGGATTGGTTCTTTAGAAATTCATTAT TTAGGAAAATGGACTTTAACCCTTATAATATTTGGAAAAATTTAAATCTTGACGATAAGAAAGATTTTGCAGAAATTTTG GAATACAACATGCAATTAAAAATAAATTCTTTAATCACAAAAGAATTTAATAAGCTTTTAGCGATCGCTGAAGATAGTTC TCAAGATAGTTACCAATTGAAAATTCGTGTCCGACACAATAACAAATTTTATGATTATTCAAAGAAATCTACGGCATATG AAATAAAACTTGAAATTCATGATTGCAGAAAATCCCACGATCAAAATGAGCCAATCATCTTAAGCCAGCAAAGCACCGGC TTCCAATGGGCGTTTAATTTCATGTTTGGTTTTCTCTACAATGTGGGATCAGATTTTAGCCTTAACAAGAATATCATCTA TGTCATGGACGAGCCAGCCACTCATTTGAGCGTGCCAGCCAGAAAGGAATTCAGGAGATTTTTAAAAGAATACGCTCATA AAAATCATGTCACTTTTGTTTTAGCCACCCATGACCCCTTTTTAGTAGATACGGATCATTTAGATGAAATAAGAATTGTG GAAAAAGAAACAGAAGGCTCTGTGATTAAGAATCATTTTAACTACCCCCTAAATAATGCGGGCAAAGACTCCGACGCTCT TGATAAAATCAAACGCTCTTTAGGGGTGGGTCAGCATGTTTTCCATAACCCAAAAAAACACCAAATCATTTTTGTAGAAG GCATCACGGATTATTGTTATTTGAGCGCTTTTAAATTGTATTTCAATGAGCGAGAATTCAAAGAAAACCCCATTCCTTTC ACTTTCTTACCCATTTCAGGGCTTAAAAACAATCCAAACGAGATGAAAGAAACCATTCAAAAGCTCTGCGAGTTAGACAA TCACCCTATTGTTTTGACAGATGATGACAGAAAAGATGGTTCTGACCCACAAAGAGCAAAAAGCGAACAATTCAAAAACG CTAATGAAGAAATGCATGATCCTATCAGAATTTTACAACTCTCAGACTGCGATAGGCATTTCAAACAAATTGAAGATTGT TTCAGCGCAAACGATAGAAAAAAATACGCTAAAAATAAGCAAATGGAATTGGCCATGGCGTTCAAAACAAGGCTTTTGTA TGGCGAAAAAGACGATGTAATGAGCGAAGAAACAAAAAAGAATTTTCTAAAATTGTTTGAGTGGATAAAAAAAGAGTGCA ATAACCTAACGATTAAAAAAGAATATATCAAATTTGATTATAATACCCCACAAATGTTATAA
Upstream 100 bases:
>100_bases CTATTCAAATATTTGCACTTTTGTTAATAATTTTATAAATCTTATAGCTTCTTACAATTTATTAGAATCATTTTTAGATT TTTACAAAGAAAAATTAAAA
Downstream 100 bases:
>100_bases AGTGAAAGGATTTTGATGTTTAAAAAAATGTGTTTGAGCTTGCTAATGATAAGCGGTGTTTGTGTGGGGGCAAAGGATTT GGATTTCAAGCTGGATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 793; Mature: 792
Protein sequence:
>793_residues MSELVTEYANATNNLLFKELIKHVSGNSEGIKNFCQCVKEIKKCNTPNKKYNSDEFFIMGKHKQNQLAKIYSYFKKLSEG EIKPQNEDILKKLKSLDEIFKTTDFTKFTPETEVKDIIKEIDEKYPINENFKQQFRTFRLNIGNLKKKIKNSLKYLEKTR KNFERKKESLIREIEYYCKNQKTLEFDYDVLLDNIQQICKKYIASHVVNDASKDIKSMMCQFYLEKIDLLFNSEIEQYRY SDFLESARKFLWEDIKTLDEKSGVHLFPKNIGEIKDKFETNKEKFKQSKNYSEFAEYCRECNPYTAFQNLRNKVQFPLSG GLSYKSYKLVPTMKEYKEPKITDNDLKTALFTLFDYSSPSEFDQWDWFFRNSLFRKMDFNPYNIWKNLNLDDKKDFAEIL EYNMQLKINSLITKEFNKLLAIAEDSSQDSYQLKIRVRHNNKFYDYSKKSTAYEIKLEIHDCRKSHDQNEPIILSQQSTG FQWAFNFMFGFLYNVGSDFSLNKNIIYVMDEPATHLSVPARKEFRRFLKEYAHKNHVTFVLATHDPFLVDTDHLDEIRIV EKETEGSVIKNHFNYPLNNAGKDSDALDKIKRSLGVGQHVFHNPKKHQIIFVEGITDYCYLSAFKLYFNEREFKENPIPF TFLPISGLKNNPNEMKETIQKLCELDNHPIVLTDDDRKDGSDPQRAKSEQFKNANEEMHDPIRILQLSDCDRHFKQIEDC FSANDRKKYAKNKQMELAMAFKTRLLYGEKDDVMSEETKKNFLKLFEWIKKECNNLTIKKEYIKFDYNTPQML
Sequences:
>Translated_793_residues MSELVTEYANATNNLLFKELIKHVSGNSEGIKNFCQCVKEIKKCNTPNKKYNSDEFFIMGKHKQNQLAKIYSYFKKLSEG EIKPQNEDILKKLKSLDEIFKTTDFTKFTPETEVKDIIKEIDEKYPINENFKQQFRTFRLNIGNLKKKIKNSLKYLEKTR KNFERKKESLIREIEYYCKNQKTLEFDYDVLLDNIQQICKKYIASHVVNDASKDIKSMMCQFYLEKIDLLFNSEIEQYRY SDFLESARKFLWEDIKTLDEKSGVHLFPKNIGEIKDKFETNKEKFKQSKNYSEFAEYCRECNPYTAFQNLRNKVQFPLSG GLSYKSYKLVPTMKEYKEPKITDNDLKTALFTLFDYSSPSEFDQWDWFFRNSLFRKMDFNPYNIWKNLNLDDKKDFAEIL EYNMQLKINSLITKEFNKLLAIAEDSSQDSYQLKIRVRHNNKFYDYSKKSTAYEIKLEIHDCRKSHDQNEPIILSQQSTG FQWAFNFMFGFLYNVGSDFSLNKNIIYVMDEPATHLSVPARKEFRRFLKEYAHKNHVTFVLATHDPFLVDTDHLDEIRIV EKETEGSVIKNHFNYPLNNAGKDSDALDKIKRSLGVGQHVFHNPKKHQIIFVEGITDYCYLSAFKLYFNEREFKENPIPF TFLPISGLKNNPNEMKETIQKLCELDNHPIVLTDDDRKDGSDPQRAKSEQFKNANEEMHDPIRILQLSDCDRHFKQIEDC FSANDRKKYAKNKQMELAMAFKTRLLYGEKDDVMSEETKKNFLKLFEWIKKECNNLTIKKEYIKFDYNTPQML >Mature_792_residues SELVTEYANATNNLLFKELIKHVSGNSEGIKNFCQCVKEIKKCNTPNKKYNSDEFFIMGKHKQNQLAKIYSYFKKLSEGE IKPQNEDILKKLKSLDEIFKTTDFTKFTPETEVKDIIKEIDEKYPINENFKQQFRTFRLNIGNLKKKIKNSLKYLEKTRK NFERKKESLIREIEYYCKNQKTLEFDYDVLLDNIQQICKKYIASHVVNDASKDIKSMMCQFYLEKIDLLFNSEIEQYRYS DFLESARKFLWEDIKTLDEKSGVHLFPKNIGEIKDKFETNKEKFKQSKNYSEFAEYCRECNPYTAFQNLRNKVQFPLSGG LSYKSYKLVPTMKEYKEPKITDNDLKTALFTLFDYSSPSEFDQWDWFFRNSLFRKMDFNPYNIWKNLNLDDKKDFAEILE YNMQLKINSLITKEFNKLLAIAEDSSQDSYQLKIRVRHNNKFYDYSKKSTAYEIKLEIHDCRKSHDQNEPIILSQQSTGF QWAFNFMFGFLYNVGSDFSLNKNIIYVMDEPATHLSVPARKEFRRFLKEYAHKNHVTFVLATHDPFLVDTDHLDEIRIVE KETEGSVIKNHFNYPLNNAGKDSDALDKIKRSLGVGQHVFHNPKKHQIIFVEGITDYCYLSAFKLYFNEREFKENPIPFT FLPISGLKNNPNEMKETIQKLCELDNHPIVLTDDDRKDGSDPQRAKSEQFKNANEEMHDPIRILQLSDCDRHFKQIEDCF SANDRKKYAKNKQMELAMAFKTRLLYGEKDDVMSEETKKNFLKLFEWIKKECNNLTIKKEYIKFDYNTPQML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94347; Mature: 94216
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELVTEYANATNNLLFKELIKHVSGNSEGIKNFCQCVKEIKKCNTPNKKYNSDEFFIMG CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC KHKQNQLAKIYSYFKKLSEGEIKPQNEDILKKLKSLDEIFKTTDFTKFTPETEVKDIIKE CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IDEKYPINENFKQQFRTFRLNIGNLKKKIKNSLKYLEKTRKNFERKKESLIREIEYYCKN HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QKTLEFDYDVLLDNIQQICKKYIASHVVNDASKDIKSMMCQFYLEKIDLLFNSEIEQYRY CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDFLESARKFLWEDIKTLDEKSGVHLFPKNIGEIKDKFETNKEKFKQSKNYSEFAEYCRE HHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHC CNPYTAFQNLRNKVQFPLSGGLSYKSYKLVPTMKEYKEPKITDNDLKTALFTLFDYSSPS CCCHHHHHHHHHHEECCCCCCCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCCC EFDQWDWFFRNSLFRKMDFNPYNIWKNLNLDDKKDFAEILEYNMQLKINSLITKEFNKLL CCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHE AIAEDSSQDSYQLKIRVRHNNKFYDYSKKSTAYEIKLEIHDCRKSHDQNEPIILSQQSTG EEECCCCCCCEEEEEEEEECCCEECCCCCCCEEEEEEEEEHHHHCCCCCCCEEEEECCCC FQWAFNFMFGFLYNVGSDFSLNKNIIYVMDEPATHLSVPARKEFRRFLKEYAHKNHVTFV HHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE LATHDPFLVDTDHLDEIRIVEKETEGSVIKNHFNYPLNNAGKDSDALDKIKRSLGVGQHV EEECCCEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHH FHNPKKHQIIFVEGITDYCYLSAFKLYFNEREFKENPIPFTFLPISGLKNNPNEMKETIQ HCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH KLCELDNHPIVLTDDDRKDGSDPQRAKSEQFKNANEEMHDPIRILQLSDCDRHFKQIEDC HHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHCCCHHEEEECHHHHHHHHHHHH FSANDRKKYAKNKQMELAMAFKTRLLYGEKDDVMSEETKKNFLKLFEWIKKECNNLTIKK HCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE EYIKFDYNTPQML EEEEEECCCCCCC >Mature Secondary Structure SELVTEYANATNNLLFKELIKHVSGNSEGIKNFCQCVKEIKKCNTPNKKYNSDEFFIMG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC KHKQNQLAKIYSYFKKLSEGEIKPQNEDILKKLKSLDEIFKTTDFTKFTPETEVKDIIKE CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IDEKYPINENFKQQFRTFRLNIGNLKKKIKNSLKYLEKTRKNFERKKESLIREIEYYCKN HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QKTLEFDYDVLLDNIQQICKKYIASHVVNDASKDIKSMMCQFYLEKIDLLFNSEIEQYRY CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDFLESARKFLWEDIKTLDEKSGVHLFPKNIGEIKDKFETNKEKFKQSKNYSEFAEYCRE HHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHC CNPYTAFQNLRNKVQFPLSGGLSYKSYKLVPTMKEYKEPKITDNDLKTALFTLFDYSSPS CCCHHHHHHHHHHEECCCCCCCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCCC EFDQWDWFFRNSLFRKMDFNPYNIWKNLNLDDKKDFAEILEYNMQLKINSLITKEFNKLL CCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHE AIAEDSSQDSYQLKIRVRHNNKFYDYSKKSTAYEIKLEIHDCRKSHDQNEPIILSQQSTG EEECCCCCCCEEEEEEEEECCCEECCCCCCCEEEEEEEEEHHHHCCCCCCCEEEEECCCC FQWAFNFMFGFLYNVGSDFSLNKNIIYVMDEPATHLSVPARKEFRRFLKEYAHKNHVTFV HHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE LATHDPFLVDTDHLDEIRIVEKETEGSVIKNHFNYPLNNAGKDSDALDKIKRSLGVGQHV EEECCCEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHH FHNPKKHQIIFVEGITDYCYLSAFKLYFNEREFKENPIPFTFLPISGLKNNPNEMKETIQ HCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH KLCELDNHPIVLTDDDRKDGSDPQRAKSEQFKNANEEMHDPIRILQLSDCDRHFKQIEDC HHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHCCCHHEEEECHHHHHHHHHHHH FSANDRKKYAKNKQMELAMAFKTRLLYGEKDDVMSEETKKNFLKLFEWIKKECNNLTIKK HCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE EYIKFDYNTPQML EEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA