| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15618912
GI number: 15618912
Start: 1154876
End: 1155397
Strand: Reverse
Name: Not Available
Synonym: CPn1004
Alternate gene names: NA
Gene position: 1155397-1154876 (Counterclockwise)
Preceding gene: 15618913
Following gene: 15618911
Centisome position: 93.92
GC content: 40.8
Gene sequence:
>522_bases ATGTCGATACAACCCGTCTCTAATACAACAACTAAAGCCGATAAAGTGATTCCTGATTCTACAAAAGTAATTTCTGACTC CATCACAATTAACAAACAGTCTGCATTCTACTTTTGCATCTCCGTCATGCTTCGGCTCTCTGAATCCACAACAGAGTACG GCAAATCAATCTTAGCCGTACTAGAAGATAATACAATAGTCCAACAGCAAAGAGTGAAAGAGCTCATTAACCTCCCCTTA CTTAAAGTACCCGATCTACAGAAAAAAGATGGAAGCGATGACGAATATAAGAACCAAAATGAAATCCAAGCCTACCAAAG CTCAAACCAACAGATCTCAGCAAATCGTCAAATGATACAACAGGAGCTCTCCTCGGCACAACAAAGAGCACAGGCAAACC AAAAGTCTGTAAACTCAACAACCATAGAATCCATGCAAATTCTACAAGCCACCAGCTCCATGCTCTCTACCCTAAAGGAA CTAACAATCAAGGCAAATCTAACGAACTCACCCTCTGACTAA
Upstream 100 bases:
>100_bases ATAACATCATCCAACAATCCTTACAGGTAGGACAGGCTCTTATCCAGACCTTCTCTCAAATTGTAAGCCTAATTGCTAAC ATCTAAGTATAGAGGAACTC
Downstream 100 bases:
>100_bases ACTATGACAATAGACTTCTAATAAAACAATTCATCCTCTACTATGGGGGCCTGACCGTCAGATTGCAGGTAAAGCCTCCA TGAGGGTGATTTTCCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSIQPVSNTTTKADKVIPDSTKVISDSITINKQSAFYFCISVMLRLSESTTEYGKSILAVLEDNTIVQQQRVKELINLPL LKVPDLQKKDGSDDEYKNQNEIQAYQSSNQQISANRQMIQQELSSAQQRAQANQKSVNSTTIESMQILQATSSMLSTLKE LTIKANLTNSPSD
Sequences:
>Translated_173_residues MSIQPVSNTTTKADKVIPDSTKVISDSITINKQSAFYFCISVMLRLSESTTEYGKSILAVLEDNTIVQQQRVKELINLPL LKVPDLQKKDGSDDEYKNQNEIQAYQSSNQQISANRQMIQQELSSAQQRAQANQKSVNSTTIESMQILQATSSMLSTLKE LTIKANLTNSPSD >Mature_172_residues SIQPVSNTTTKADKVIPDSTKVISDSITINKQSAFYFCISVMLRLSESTTEYGKSILAVLEDNTIVQQQRVKELINLPLL KVPDLQKKDGSDDEYKNQNEIQAYQSSNQQISANRQMIQQELSSAQQRAQANQKSVNSTTIESMQILQATSSMLSTLKEL TIKANLTNSPSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19248; Mature: 19117
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQPVSNTTTKADKVIPDSTKVISDSITINKQSAFYFCISVMLRLSESTTEYGKSILAV CCCCCCCCCCCHHHHCCCCCHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEDNTIVQQQRVKELINLPLLKVPDLQKKDGSDDEYKNQNEIQAYQSSNQQISANRQMIQ HCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH QELSSAQQRAQANQKSVNSTTIESMQILQATSSMLSTLKELTIKANLTNSPSD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SIQPVSNTTTKADKVIPDSTKVISDSITINKQSAFYFCISVMLRLSESTTEYGKSILAV CCCCCCCCCCHHHHCCCCCHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEDNTIVQQQRVKELINLPLLKVPDLQKKDGSDDEYKNQNEIQAYQSSNQQISANRQMIQ HCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH QELSSAQQRAQANQKSVNSTTIESMQILQATSSMLSTLKELTIKANLTNSPSD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA