| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618871
GI number: 15618871
Start: 1103298
End: 1104758
Strand: Reverse
Name: Not Available
Synonym: CPn0964
Alternate gene names: NA
Gene position: 1104758-1103298 (Counterclockwise)
Preceding gene: 15618872
Following gene: 15618866
Centisome position: 89.8
GC content: 40.73
Gene sequence:
>1461_bases ATGCATATGTCTAACCCCATCTCTTTGTTTTCCCCTGCAGAGTTAATAGCAAAGTACAATTTAATTCCAAAAACTTCGCC GATTTATCCTCGGAGGACGGAACTTATTATCTTGGAAGAAAATGCGTGTCAAACACGCCTAACCAACGTGGCTCAGGTCC TACATCCTTCTAGCCTATTCAGTATGTCAAAAAAAATACTGAATCCCTGCGGGTGCTCTGGTGGTCCCTTATGTTGGGTG ATTCTCAACATCCTAGCATTTATTATTACTTCAGTACTGTTTATCATTCTTTTACCGGTGAATCTCATCGTAGCAGGTCT TCGTCTCTTCATGCCTCTTCCCCCTAAAAAAATCGTAGAGGATTTAAGTGAACCTACTACTGAAGAAACGAATGAGGTCA TTCAACCCTTCATTTTCGCTTTGCAAGCGTTGCTTTTTGAGGATAACAAACTTCGCTCTTTTAAAATTGTTGAACAAAGT GTAGGCAAAGCACCCTTACCTAATCCCTTTTTAAATAGACTAGTAGCAATTTCGCCGCAAGAAAGCCAAGAAGCCATGCG GAAGATTCCGGATCTATGCTCACAACTGAAAAAAGTATTAAAGTCTCTAGGCGTGCTAACTCCAGAATGGAAGCACATGC TGAAGTACTTTGAGGGACTGAAAAACGAACATGATAGTAATCCTGATAAAAAGACGTTCCCAATATTGATCAAGCTCCTC ATAGAAGCTCTTACTGGAAAGTCCTCTTTACCCAAAACTCCTAGTACAAAGGAAAAAATGCAAGCGGCCTTATTTATTGC AAGTTCTTGCAAGACTTGTAAGCCGACTTGGGGAGAAGTCATAACCAGATCTCTTAACAGACTCTATAGTATAGCTAATG AAGGAGACAATCAGCTTCTGATTTGGGTTCAAGAGTTTAAAGAACGAGAGCTGATGTCCATCCAAGATGGTGATGATGCT GAAGAGTATCGGTTTGCGGCTCAGCAACACGGTGAGCGTTACACAGAGGCAATAGAACAAGTTCTACGAAACGAGTCAGC AGCCAAACTACAATGGCATGTGATCAACACTATGAAATTCTTCCATGGGAAAAATCTCGGTCTAGTTACAGAACACCTAC AAGATACTCTCGGCGCCCTAACTTTACGTCAAACTACAGTGGACACACATCAAGGCAGAGAAGACGCTGATTTGTCAGCT GCTCTTTTCCTAAATAAGTATTTAAATTCTGGAAATCAACTTGTTAATAGCGTCTTTAAATCCATGCAAAAAGCAGATCC AGAAACCAAAGCTTTAATCCGTGAGTTTGCTCTAGATATATTATATGCATCCTTACGGCTTCCTCAAACTTCCGCTCATA CCGAGGTCTTTTCTACACTCTTAATGGACCCAGAGACCTATGAACCTAATAAAGCTTGTATCGCCTACTTGCTCTATGTA TTAAAGATCATCGAACTATAA
Upstream 100 bases:
>100_bases TGAGCTACTTTTTTATAGTATTTCTAAATAAAAATTAATTGAATAACAATCAATCTTAGAAAGTATAATAAAATATTTCT ACTTAATCCATAACTCCAAG
Downstream 100 bases:
>100_bases GCATTAAGAGAAATAAAAAAGGGTTACTAAAAGTAACCCTTTTTTTTGATTGAAGCCCTGTCACATCGAACTAGAAAATA ATACGGATACCACCATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLFSMSKKILNPCGCSGGPLCWV ILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVEDLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQS VGKAPLPNPFLNRLVAISPQESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLLIWVQEFKERELMSIQDGDDA EEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKFFHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSA ALFLNKYLNSGNQLVNSVFKSMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV LKIIEL
Sequences:
>Translated_486_residues MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLFSMSKKILNPCGCSGGPLCWV ILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVEDLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQS VGKAPLPNPFLNRLVAISPQESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLLIWVQEFKERELMSIQDGDDA EEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKFFHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSA ALFLNKYLNSGNQLVNSVFKSMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV LKIIEL >Mature_486_residues MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLFSMSKKILNPCGCSGGPLCWV ILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVEDLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQS VGKAPLPNPFLNRLVAISPQESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLLIWVQEFKERELMSIQDGDDA EEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKFFHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSA ALFLNKYLNSGNQLVNSVFKSMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV LKIIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54866; Mature: 54866
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLF CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCHHHHH SMSKKILNPCGCSGGPLCWVILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH DLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQSVGKAPLPNPFLNRLVAISPQ HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHEECCCH ESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLL HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE IWVQEFKERELMSIQDGDDAEEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKF EEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHH FHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSAALFLNKYLNSGNQLVNSVFK HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH SMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LKIIEL HHHHCC >Mature Secondary Structure MHMSNPISLFSPAELIAKYNLIPKTSPIYPRRTELIILEENACQTRLTNVAQVLHPSSLF CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCHHHHH SMSKKILNPCGCSGGPLCWVILNILAFIITSVLFIILLPVNLIVAGLRLFMPLPPKKIVE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH DLSEPTTEETNEVIQPFIFALQALLFEDNKLRSFKIVEQSVGKAPLPNPFLNRLVAISPQ HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHEECCCH ESQEAMRKIPDLCSQLKKVLKSLGVLTPEWKHMLKYFEGLKNEHDSNPDKKTFPILIKLL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IEALTGKSSLPKTPSTKEKMQAALFIASSCKTCKPTWGEVITRSLNRLYSIANEGDNQLL HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE IWVQEFKERELMSIQDGDDAEEYRFAAQQHGERYTEAIEQVLRNESAAKLQWHVINTMKF EEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHH FHGKNLGLVTEHLQDTLGALTLRQTTVDTHQGREDADLSAALFLNKYLNSGNQLVNSVFK HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH SMQKADPETKALIREFALDILYASLRLPQTSAHTEVFSTLLMDPETYEPNKACIAYLLYV HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LKIIEL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA