| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618817
GI number: 15618817
Start: 1040777
End: 1041589
Strand: Reverse
Name: Not Available
Synonym: CPn0908
Alternate gene names: NA
Gene position: 1041589-1040777 (Counterclockwise)
Preceding gene: 15618820
Following gene: 15618816
Centisome position: 84.67
GC content: 37.15
Gene sequence:
>813_bases ATGATCATAATAAAAAACAATGAGCTCATGATAAGACGTTTTTTCAAAACGCTTTTCCCTCCGGGTCCTCAATACTCTTT ATGTTATGCTTCGATCCTGATCGTTTTGAGTTCCCTTGTTTGTGTTCCTACATTTTGTTGGTTATTTCTCCCTGAACTGT CTTTATCTAAATTCAATCCTTCTCCCATTAGGAACCTATTTTTAGTTTCCTCCACTCTATCCAAAGTCCCTCCTACTGCG ATTGCAGAACATTTACGTCTTTCTGCGGATGCACCTACATATCTCCATGAATTCTCTATTAAAGAAGCTGAGTCGAGCTT GCATGCTCTTGGGATTTTTTCCTCTTTAGTTATAGAAAAATCTCCTGATAATAAGGGCATTACAATTTTCTATACCTTAC AAACACCTATTGCTTATGTTGGGAACCGATCTAATACGTTATGCAATCTCGAGGGGAGCTGCTTTCTTGGTCAACCGTAC TTCCCCTCTCTGAATCTCCCTCAGATTTTTTTCTCTCAAGAAGATTTAAAAATGCAAAAACTCCCTAAAGAAAAAATGCT TTTTACCAAGATTCTTCTTAAGGAGCTTGCTATGGAGTCTCCGAAAATCATTGATTTATCTTTATCTGATGCATACCCTG GAGAAATTATAGTGACGCTCTCTTCAGGCAGTCTGTTAAGACTTCCAATTAAGACCTTAGATCGTGCCTTAGACCTGTAT AAGCACATGAAAAAAAGTCCTGTAATCGAGAGCGAAAAACAATATGTCTATGATTTGCGTTTTCCAAATTTCTTATTATT AAAAGCTCTATGA
Upstream 100 bases:
>100_bases CCTTGTAAATAAATAACAATGATATCTCCGTATTCTTTAGCTGATAAATTCATCAGTAATCTCTCCAAGAGGAATCTCGT AAATATTAGCGATATTATTT
Downstream 100 bases:
>100_bases CTGCTGTTCTTATTCTTACATCTTTCCCTTCGGAGGAAAGTGCTCGCTCCTTAGCTAGACATCTGATTACAGAGCGTCTT GCTTCCTGTGTGCATGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MIIIKNNELMIRRFFKTLFPPGPQYSLCYASILIVLSSLVCVPTFCWLFLPELSLSKFNPSPIRNLFLVSSTLSKVPPTA IAEHLRLSADAPTYLHEFSIKEAESSLHALGIFSSLVIEKSPDNKGITIFYTLQTPIAYVGNRSNTLCNLEGSCFLGQPY FPSLNLPQIFFSQEDLKMQKLPKEKMLFTKILLKELAMESPKIIDLSLSDAYPGEIIVTLSSGSLLRLPIKTLDRALDLY KHMKKSPVIESEKQYVYDLRFPNFLLLKAL
Sequences:
>Translated_270_residues MIIIKNNELMIRRFFKTLFPPGPQYSLCYASILIVLSSLVCVPTFCWLFLPELSLSKFNPSPIRNLFLVSSTLSKVPPTA IAEHLRLSADAPTYLHEFSIKEAESSLHALGIFSSLVIEKSPDNKGITIFYTLQTPIAYVGNRSNTLCNLEGSCFLGQPY FPSLNLPQIFFSQEDLKMQKLPKEKMLFTKILLKELAMESPKIIDLSLSDAYPGEIIVTLSSGSLLRLPIKTLDRALDLY KHMKKSPVIESEKQYVYDLRFPNFLLLKAL >Mature_270_residues MIIIKNNELMIRRFFKTLFPPGPQYSLCYASILIVLSSLVCVPTFCWLFLPELSLSKFNPSPIRNLFLVSSTLSKVPPTA IAEHLRLSADAPTYLHEFSIKEAESSLHALGIFSSLVIEKSPDNKGITIFYTLQTPIAYVGNRSNTLCNLEGSCFLGQPY FPSLNLPQIFFSQEDLKMQKLPKEKMLFTKILLKELAMESPKIIDLSLSDAYPGEIIVTLSSGSLLRLPIKTLDRALDLY KHMKKSPVIESEKQYVYDLRFPNFLLLKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30558; Mature: 30558
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIKNNELMIRRFFKTLFPPGPQYSLCYASILIVLSSLVCVPTFCWLFLPELSLSKFNP CEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SPIRNLFLVSSTLSKVPPTAIAEHLRLSADAPTYLHEFSIKEAESSLHALGIFSSLVIEK CHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEC SPDNKGITIFYTLQTPIAYVGNRSNTLCNLEGSCFLGQPYFPSLNLPQIFFSQEDLKMQK CCCCCCEEEEEEECCCCEECCCCCCEEEECCCCEEECCCCCCCCCCCCEEECCCCHHHHH LPKEKMLFTKILLKELAMESPKIIDLSLSDAYPGEIIVTLSSGSLLRLPIKTLDRALDLY CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCEEEECHHHHHHHHHHH KHMKKSPVIESEKQYVYDLRFPNFLLLKAL HHHHCCCCCCCCCCEEEEECCCCEEEEECC >Mature Secondary Structure MIIIKNNELMIRRFFKTLFPPGPQYSLCYASILIVLSSLVCVPTFCWLFLPELSLSKFNP CEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SPIRNLFLVSSTLSKVPPTAIAEHLRLSADAPTYLHEFSIKEAESSLHALGIFSSLVIEK CHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEC SPDNKGITIFYTLQTPIAYVGNRSNTLCNLEGSCFLGQPYFPSLNLPQIFFSQEDLKMQK CCCCCCEEEEEEECCCCEECCCCCCEEEECCCCEEECCCCCCCCCCCCEEECCCCHHHHH LPKEKMLFTKILLKELAMESPKIIDLSLSDAYPGEIIVTLSSGSLLRLPIKTLDRALDLY CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCEEEECHHHHHHHHHHH KHMKKSPVIESEKQYVYDLRFPNFLLLKAL HHHHCCCCCCCCCCEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA