Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15618787

GI number: 15618787

Start: 995989

End: 996654

Strand: Reverse

Name: Not Available

Synonym: CPn0878

Alternate gene names: NA

Gene position: 996654-995989 (Counterclockwise)

Preceding gene: 15618788

Following gene: 15618783

Centisome position: 81.01

GC content: 41.89

Gene sequence:

>666_bases
ATGTCCACGGTAACTACGGAACCTTGTTCTTCTATACACATTTCTTTGAACAATGATTGGCGAGATAGCCAGCCGTATTC
TTTAGACCGAGCGAGTGAACTTCTTCATTTTCGGTTTCTTCCTTCTTTAGTTTTTTCTAACTGGAAGGTAGAACAGCAAA
TTGAGACTCTTTGTCACAAATCGGAAAAACGTCGTTTGATTTCTCCTCTAGCCAAGTGGTTAGGAAAACTACACAAGCAA
GATCTATTATGTCCTCCAGCTCCACCGGTTTCTGTCTGTTGGATTAATGCGCACGTAGGGTATGGAGTTTTTGCTCGTGA
TGAAATTGCTCCTTGGACATATATCGGAGAATACACGGGAATTTTGCGTCACCGGCAGGCAATTTGGATGGATGAGAACG
ATTATTGTTTTCGTTATCCGATGCCTTTATTCACTTTAAGATATTTTACTATTGATAGTGGGAAGCAGGGAAACGTCACA
CGTTTTATCAATCACAGCGAACAACCTAATGCGGAAGCTATCGGGGTTTTCAGTGAGGGATTGTTTCACGTGATTATCAG
GACAGTAGCACCGATATATGCGGGCCAAGAAATTTGCTATCACTATGGCCCGCTATATTGGAAACACAGGAAGAAGCGAG
AGGAATTTATTCCTGAAGAGGAATAA

Upstream 100 bases:

>100_bases
CAGTATCTGAATCGATAGCTTCTATCACTTCTATAGCACCAGAAATTGCATTAGCGCAGGGCATTACATCTCCAATATAC
TTTTCTCGTCTTGAGGTTGC

Downstream 100 bases:

>100_bases
ATTCTAACTTTTCTCGTAAGTTCCCATTAACTCTGCTTGTTCTATAATATGGAATTCCATTGCTTCATATAGCTGATCAC
GGGTGACGTTTTCTTCTTCT

Product: SET domain protein

Products: NA

Alternate protein names: Nuclear Protein SET; SET Domain Protein; SET Domain Containing Protein

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSTVTTEPCSSIHISLNNDWRDSQPYSLDRASELLHFRFLPSLVFSNWKVEQQIETLCHKSEKRRLISPLAKWLGKLHKQ
DLLCPPAPPVSVCWINAHVGYGVFARDEIAPWTYIGEYTGILRHRQAIWMDENDYCFRYPMPLFTLRYFTIDSGKQGNVT
RFINHSEQPNAEAIGVFSEGLFHVIIRTVAPIYAGQEICYHYGPLYWKHRKKREEFIPEEE

Sequences:

>Translated_221_residues
MSTVTTEPCSSIHISLNNDWRDSQPYSLDRASELLHFRFLPSLVFSNWKVEQQIETLCHKSEKRRLISPLAKWLGKLHKQ
DLLCPPAPPVSVCWINAHVGYGVFARDEIAPWTYIGEYTGILRHRQAIWMDENDYCFRYPMPLFTLRYFTIDSGKQGNVT
RFINHSEQPNAEAIGVFSEGLFHVIIRTVAPIYAGQEICYHYGPLYWKHRKKREEFIPEEE
>Mature_220_residues
STVTTEPCSSIHISLNNDWRDSQPYSLDRASELLHFRFLPSLVFSNWKVEQQIETLCHKSEKRRLISPLAKWLGKLHKQD
LLCPPAPPVSVCWINAHVGYGVFARDEIAPWTYIGEYTGILRHRQAIWMDENDYCFRYPMPLFTLRYFTIDSGKQGNVTR
FINHSEQPNAEAIGVFSEGLFHVIIRTVAPIYAGQEICYHYGPLYWKHRKKREEFIPEEE

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25876; Mature: 25745

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVTTEPCSSIHISLNNDWRDSQPYSLDRASELLHFRFLPSLVFSNWKVEQQIETLCHK
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SEKRRLISPLAKWLGKLHKQDLLCPPAPPVSVCWINAHVGYGVFARDEIAPWTYIGEYTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCEEHHHHHH
ILRHRQAIWMDENDYCFRYPMPLFTLRYFTIDSGKQGNVTRFINHSEQPNAEAIGVFSEG
HHHHHHEEEECCCCCEEECCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCEEHHHHHH
LFHVIIRTVAPIYAGQEICYHYGPLYWKHRKKREEFIPEEE
HHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STVTTEPCSSIHISLNNDWRDSQPYSLDRASELLHFRFLPSLVFSNWKVEQQIETLCHK
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SEKRRLISPLAKWLGKLHKQDLLCPPAPPVSVCWINAHVGYGVFARDEIAPWTYIGEYTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCEEHHHHHH
ILRHRQAIWMDENDYCFRYPMPLFTLRYFTIDSGKQGNVTRFINHSEQPNAEAIGVFSEG
HHHHHHEEEECCCCCEEECCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCEEHHHHHH
LFHVIIRTVAPIYAGQEICYHYGPLYWKHRKKREEFIPEEE
HHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA