| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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The map label for this gene is pgmA
Identifier: 15618772
GI number: 15618772
Start: 980828
End: 981514
Strand: Reverse
Name: pgmA
Synonym: CPn0863
Alternate gene names: 15618772
Gene position: 981514-980828 (Counterclockwise)
Preceding gene: 15618775
Following gene: 15618771
Centisome position: 79.78
GC content: 39.45
Gene sequence:
>687_bases ATGGCTCTTCTTATTTTATTACGTCATGGACAATCTGTATGGAATGAAAAAAATTTATTTTCTGGATGGGTAGACATTCC TTTAAGCCAACAGGGAATTGAAGAGGCTTTTTCCGCAGGAAGAGCTATTCAAAATTTGCCTATAGACTGCATCTTTACCT CTACCTTAGTACGTAGTCTGATGACCGCCTTACTCGCCATGACAAATCATCACTCTAAGAAGATCCCCTATATTGTTCAT GAAGATCCCAAAGCAAAAGAGATGTCGAGGATCTACAGTGCGGAAGAAGAAAACAATATGATTCCTCTCTATCAATCTAG TGCCCTCAACGAAAGAATGTACGGCGAACTTCAAGGAAAAAATAAAAAACAAACAGCCGAACAGTTCGGAGAAGAGCGGG TCAAGCTGTGGAGGCGCAGCTACAAAACAGCTCCTCCTCAGGGAGAAAGCCTCTATGATACGAAACAAAGGACCTTGCCT TACTTTGAAAAAAATATTTTGCCTCAACTGCAAAATGGAAAAAACGTTTTTGTTTCTGCGCACGGAAATTCCTTACGCTC TTTGATTATGGATCTAGAAAAATTAAGTGAGGAAGAGGTACTATCTTTAGAATTACCGACGGGAAAACCAGTTGTATATC AATGGAAAAACCACAAAATCGAAAAGCACCCAGAATTTTTTGGTTAA
Upstream 100 bases:
>100_bases TTCTTTGCTTAAAAACTTTTTTTACTTCTATATTTTCTACTAGACAAAAGTTGATTTCTGCTTATGCTTAGCTTCTCACC CTAAATTCTAGTAGGAACAT
Downstream 100 bases:
>100_bases ACAACCAAGTCGCTATTCCTCCTTCTGAGCGGGTTAAAGAAAGTTATGCCCTACACTCGGACATATTTTCTCTACCCCCC GGCTCCGCGTTAAAATTAGC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MALLILLRHGQSVWNEKNLFSGWVDIPLSQQGIEEAFSAGRAIQNLPIDCIFTSTLVRSLMTALLAMTNHHSKKIPYIVH EDPKAKEMSRIYSAEEENNMIPLYQSSALNERMYGELQGKNKKQTAEQFGEERVKLWRRSYKTAPPQGESLYDTKQRTLP YFEKNILPQLQNGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTGKPVVYQWKNHKIEKHPEFFG
Sequences:
>Translated_228_residues MALLILLRHGQSVWNEKNLFSGWVDIPLSQQGIEEAFSAGRAIQNLPIDCIFTSTLVRSLMTALLAMTNHHSKKIPYIVH EDPKAKEMSRIYSAEEENNMIPLYQSSALNERMYGELQGKNKKQTAEQFGEERVKLWRRSYKTAPPQGESLYDTKQRTLP YFEKNILPQLQNGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTGKPVVYQWKNHKIEKHPEFFG >Mature_227_residues ALLILLRHGQSVWNEKNLFSGWVDIPLSQQGIEEAFSAGRAIQNLPIDCIFTSTLVRSLMTALLAMTNHHSKKIPYIVHE DPKAKEMSRIYSAEEENNMIPLYQSSALNERMYGELQGKNKKQTAEQFGEERVKLWRRSYKTAPPQGESLYDTKQRTLPY FEKNILPQLQNGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTGKPVVYQWKNHKIEKHPEFFG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=257, Percent_Identity=35.0194552529183, Blast_Score=153, Evalue=1e-37, Organism=Homo sapiens, GI4505753, Length=258, Percent_Identity=37.2093023255814, Blast_Score=151, Evalue=5e-37, Organism=Homo sapiens, GI4502445, Length=242, Percent_Identity=35.1239669421488, Blast_Score=148, Evalue=3e-36, Organism=Homo sapiens, GI40353764, Length=242, Percent_Identity=35.1239669421488, Blast_Score=148, Evalue=3e-36, Organism=Homo sapiens, GI71274132, Length=258, Percent_Identity=35.2713178294574, Blast_Score=138, Evalue=3e-33, Organism=Escherichia coli, GI1786970, Length=238, Percent_Identity=35.7142857142857, Blast_Score=156, Evalue=9e-40, Organism=Saccharomyces cerevisiae, GI6322697, Length=254, Percent_Identity=35.0393700787402, Blast_Score=153, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320183, Length=265, Percent_Identity=27.1698113207547, Blast_Score=99, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6324516, Length=263, Percent_Identity=28.1368821292776, Blast_Score=92, Evalue=5e-20, Organism=Drosophila melanogaster, GI24646216, Length=241, Percent_Identity=37.7593360995851, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI85725270, Length=243, Percent_Identity=36.2139917695473, Blast_Score=156, Evalue=1e-38, Organism=Drosophila melanogaster, GI85725272, Length=243, Percent_Identity=36.2139917695473, Blast_Score=156, Evalue=1e-38, Organism=Drosophila melanogaster, GI24650981, Length=243, Percent_Identity=36.2139917695473, Blast_Score=156, Evalue=1e-38, Organism=Drosophila melanogaster, GI28571817, Length=242, Percent_Identity=28.5123966942149, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571815, Length=242, Percent_Identity=28.5123966942149, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24648979, Length=242, Percent_Identity=28.5123966942149, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_CHLPN (Q9Z743)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: E86598 - PIR: G72025 - RefSeq: NP_225058.1 - RefSeq: NP_300920.1 - RefSeq: NP_445543.1 - RefSeq: NP_877164.1 - ProteinModelPortal: Q9Z743 - SMR: Q9Z743 - PHCI-2DPAGE: Q9Z743 - GeneID: 1467571 - GeneID: 895583 - GeneID: 919626 - GeneID: 963479 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP1006 - KEGG: cpn:CPn0863 - KEGG: cpt:CpB0892 - TIGR: CP_1006 - HOGENOM: HBG658938 - OMA: SDAAIME - PhylomeDB: Q9Z743 - ProtClustDB: PRK01112 - BioCyc: CPNE115711:CP_1006-MONOMER - BioCyc: CPNE115713:CPN0863-MONOMER - BioCyc: CPNE138677:CPJ0863-MONOMER - BioCyc: CPNE182082:CPB0892-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 26246; Mature: 26115
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 181-181
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLILLRHGQSVWNEKNLFSGWVDIPLSQQGIEEAFSAGRAIQNLPIDCIFTSTLVRSL CEEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHH MTALLAMTNHHSKKIPYIVHEDPKAKEMSRIYSAEEENNMIPLYQSSALNERMYGELQGK HHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCC NKKQTAEQFGEERVKLWRRSYKTAPPQGESLYDTKQRTLPYFEKNILPQLQNGKNVFVSA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCEEEEEE HGNSLRSLIMDLEKLSEEEVLSLELPTGKPVVYQWKNHKIEKHPEFFG CCHHHHHHHHHHHHCCHHCEEEEECCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure ALLILLRHGQSVWNEKNLFSGWVDIPLSQQGIEEAFSAGRAIQNLPIDCIFTSTLVRSL EEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHH MTALLAMTNHHSKKIPYIVHEDPKAKEMSRIYSAEEENNMIPLYQSSALNERMYGELQGK HHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCC NKKQTAEQFGEERVKLWRRSYKTAPPQGESLYDTKQRTLPYFEKNILPQLQNGKNVFVSA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCEEEEEE HGNSLRSLIMDLEKLSEEEVLSLELPTGKPVVYQWKNHKIEKHPEFFG CCHHHHHHHHHHHHCCHHCEEEEECCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362