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The map label for this gene is porB

Identifier: 15618763

GI number: 15618763

Start: 971803

End: 972837

Strand: Reverse

Name: porB

Synonym: CPn0854

Alternate gene names: 15618763

Gene position: 972837-971803 (Counterclockwise)

Preceding gene: 15618764

Following gene: 15618757

Centisome position: 79.08

GC content: 43.19

Gene sequence:

>1035_bases
ATGAATAGCAAGATGCTAAAACATTTACGTTTAGCAACCCTTTCCTTCTCTATGTTCTTCGGGATTGTATCTTCTCCCGC
AGTATATGCCCTAGGGGCTGGAAACCCTGCAGCTCCAGTACTCCCAGGTGTGAATCCTGAGCAAACGGGATGGTGTGCCT
TCCAACTTTGTAATAGTTACGATCTTTTTGCTGCTCTTGCAGGAAGCCTCAAATTTGGGTTCTATGGAGATTATGTCTTC
TCAGAAAGTGCCCATATTACCAATGTCCCTGTCATTACCTCCGTTACGACTTCAGGCACAGGAACAACGCCAACCATTAC
CTCTACAACTAAAAACGTAGACTTTGATCTTAACAACAGCTCCATCAGCTCGAGCTGTGTTTTTGCAACCATAGCTCTAC
AGGAAACATCCCCAGCTGCCATTCCCCTTTTAGATATAGCCTTCACTGCACGTGTCGGAGGACTTAAGCAGTACTACCGC
CTCCCTCTCAATGCTTACAGAGACTTCACTTCAAATCCTTTAAATGCAGAATCTGAAGTTACAGATGGTCTCATTGAAGT
CCAGTCAGACTATGGAATTGTCTGGGGTCTGAGTTTACAAAAAGTATTGTGGAAAGATGGAGTGTCTTTTGTAGGGGTGA
GCGCTGACTACCGTCACGGTTCCAGTCCCATCAACTATATCATCGTTTACAACAAGGCCAACCCCGAGATCTATTTCGAT
GCTACTGATGGAAACCTAAGCTATAAAGAATGGTCTGCAAGCATCGGCATCTCTACGTATCTTAATGACTATGTGCTTCC
CTATGCATCCGTATCTATAGGAAATACTTCAAGAAAAGCTCCTTCTGATAGCTTCACAGAACTCGAAAAGCAATTTACGA
ATTTTAAATTTAAAATTCGTAAAATCACAAACTTCGACAGAGTAAACTTCTGCTTCGGAACTACCTGCTGCATCTCAAAT
AACTTCTACTATAGTGTAGAAGGCCGTTGGGGATATCAGCGTGCTATCAACATTACGTCAGGTCTGCAGTTTTAG

Upstream 100 bases:

>100_bases
TTCTAAGATCCTACCCGTCACTTGTCTTTTCATTTGTACATTTTTTATACCATCTGGTAAAGAGGACTTAATCATTAAAA
GCAAATAAGGCCCCTTTGAC

Downstream 100 bases:

>100_bases
TTTTTAAATCCAGAAATTACTGTGGTATACATCCCATTCAATAATTTCAAAGATGCAGATACTAAACTCCATTGTTGTTG
CATCGCCTTAAGCTCTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNSKMLKHLRLATLSFSMFFGIVSSPAVYALGAGNPAAPVLPGVNPEQTGWCAFQLCNSYDLFAALAGSLKFGFYGDYVF
SESAHITNVPVITSVTTSGTGTTPTITSTTKNVDFDLNNSSISSSCVFATIALQETSPAAIPLLDIAFTARVGGLKQYYR
LPLNAYRDFTSNPLNAESEVTDGLIEVQSDYGIVWGLSLQKVLWKDGVSFVGVSADYRHGSSPINYIIVYNKANPEIYFD
ATDGNLSYKEWSASIGISTYLNDYVLPYASVSIGNTSRKAPSDSFTELEKQFTNFKFKIRKITNFDRVNFCFGTTCCISN
NFYYSVEGRWGYQRAINITSGLQF

Sequences:

>Translated_344_residues
MNSKMLKHLRLATLSFSMFFGIVSSPAVYALGAGNPAAPVLPGVNPEQTGWCAFQLCNSYDLFAALAGSLKFGFYGDYVF
SESAHITNVPVITSVTTSGTGTTPTITSTTKNVDFDLNNSSISSSCVFATIALQETSPAAIPLLDIAFTARVGGLKQYYR
LPLNAYRDFTSNPLNAESEVTDGLIEVQSDYGIVWGLSLQKVLWKDGVSFVGVSADYRHGSSPINYIIVYNKANPEIYFD
ATDGNLSYKEWSASIGISTYLNDYVLPYASVSIGNTSRKAPSDSFTELEKQFTNFKFKIRKITNFDRVNFCFGTTCCISN
NFYYSVEGRWGYQRAINITSGLQF
>Mature_344_residues
MNSKMLKHLRLATLSFSMFFGIVSSPAVYALGAGNPAAPVLPGVNPEQTGWCAFQLCNSYDLFAALAGSLKFGFYGDYVF
SESAHITNVPVITSVTTSGTGTTPTITSTTKNVDFDLNNSSISSSCVFATIALQETSPAAIPLLDIAFTARVGGLKQYYR
LPLNAYRDFTSNPLNAESEVTDGLIEVQSDYGIVWGLSLQKVLWKDGVSFVGVSADYRHGSSPINYIIVYNKANPEIYFD
ATDGNLSYKEWSASIGISTYLNDYVLPYASVSIGNTSRKAPSDSFTELEKQFTNFKFKIRKITNFDRVNFCFGTTCCISN
NFYYSVEGRWGYQRAINITSGLQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial OMP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMP2_CHLPN (Q9Z752)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   D86597
- PIR:   H72027
- RefSeq:   NP_225049.1
- RefSeq:   NP_300911.1
- RefSeq:   NP_445552.1
- RefSeq:   NP_877155.1
- GeneID:   1467562
- GeneID:   894651
- GeneID:   919617
- GeneID:   963489
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP1015
- KEGG:   cpn:CPn0854
- KEGG:   cpt:CpB0883
- TIGR:   CP_1015
- HOGENOM:   HBG414117
- OMA:   SYKEWSA
- ProtClustDB:   CLSK871554
- BioCyc:   CPNE115711:CP_1015-MONOMER
- BioCyc:   CPNE115713:CPN0854-MONOMER
- BioCyc:   CPNE138677:CPJ0854-MONOMER
- BioCyc:   CPNE182082:CPB0883-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37734; Mature: 37734

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKMLKHLRLATLSFSMFFGIVSSPAVYALGAGNPAAPVLPGVNPEQTGWCAFQLCNSY
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
DLFAALAGSLKFGFYGDYVFSESAHITNVPVITSVTTSGTGTTPTITSTTKNVDFDLNNS
HHHHHHHCCEEECEEECEEECCCCCEECCCEEEEEECCCCCCCCEEEECCCCEEEEECCC
SISSSCVFATIALQETSPAAIPLLDIAFTARVGGLKQYYRLPLNAYRDFTSNPLNAESEV
CCCCCEEEEEEEEECCCCCCCEEEEHHHHHHHCCHHHHHHCCHHHHHCCCCCCCCCCHHH
TDGLIEVQSDYGIVWGLSLQKVLWKDGVSFVGVSADYRHGSSPINYIIVYNKANPEIYFD
CCCEEEEECCCCEEECCHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEE
ATDGNLSYKEWSASIGISTYLNDYVLPYASVSIGNTSRKAPSDSFTELEKQFTNFKFKIR
CCCCCCCHHHHCCCCCHHHHHHCEECCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEE
KITNFDRVNFCFGTTCCISNNFYYSVEGRWGYQRAINITSGLQF
EECCCCEEEEEEEEEEEEECCEEEEEECCCCCEEEEEECCCCCC
>Mature Secondary Structure
MNSKMLKHLRLATLSFSMFFGIVSSPAVYALGAGNPAAPVLPGVNPEQTGWCAFQLCNSY
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
DLFAALAGSLKFGFYGDYVFSESAHITNVPVITSVTTSGTGTTPTITSTTKNVDFDLNNS
HHHHHHHCCEEECEEECEEECCCCCEECCCEEEEEECCCCCCCCEEEECCCCEEEEECCC
SISSSCVFATIALQETSPAAIPLLDIAFTARVGGLKQYYRLPLNAYRDFTSNPLNAESEV
CCCCCEEEEEEEEECCCCCCCEEEEHHHHHHHCCHHHHHHCCHHHHHCCCCCCCCCCHHH
TDGLIEVQSDYGIVWGLSLQKVLWKDGVSFVGVSADYRHGSSPINYIIVYNKANPEIYFD
CCCEEEEECCCCEEECCHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEE
ATDGNLSYKEWSASIGISTYLNDYVLPYASVSIGNTSRKAPSDSFTELEKQFTNFKFKIR
CCCCCCCHHHHCCCCCHHHHHHCEECCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEE
KITNFDRVNFCFGTTCCISNNFYYSVEGRWGYQRAINITSGLQF
EECCCCEEEEEEEEEEEEECCEEEEEECCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362; 10839753