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The map label for this gene is yscL

Identifier: 15618735

GI number: 15618735

Start: 933609

End: 934310

Strand: Reverse

Name: yscL

Synonym: CPn0826

Alternate gene names: 15618735

Gene position: 934310-933609 (Counterclockwise)

Preceding gene: 15618736

Following gene: 15618734

Centisome position: 75.95

GC content: 38.89

Gene sequence:

>702_bases
ATGAAGTTTTTTAGCTTAATTTTTAAAGATGATGATGTCTCCCCAAATAAGAAGGTTTTATCTCCTGAAGCTTTCTCTGC
TTTCCTTGATGCCAAAGAGCTGTTAGAAAAAACAAAAGCCGATAGCGAAGCCTATGTTGCAGAGACAGAACAAAAGTGTG
CACAAATTCGTCAAGAAGCTAAAGATCAAGGATTTAAAGAGGGATCTGAATCCTGGAGCAAGCAAATTGCTTTCTTAGAA
GAAGAAACTAAAAATCTACGCATAAGAGTACGCGAGGCCTTGGTTCCTCTGGCAATTGCGAGTGTGAGGAAAATCATTGG
GAAGGAACTCGAATTACATCCTGAAACTATTGTCTCTATTATTTCTCAAGCATTGAAAGAGCTCACACAAAATAAACATA
TCATTATCTCTGTCAATCCCAAAGATTTACCTCTTGTTGAGAAAAGTCGTCCTGAACTCAAGAACATCGTGGAGTATGCT
GACTCCTTAATTCTTACAGCAAAACCTGATGTTACTCCTGGGGGTTGCATTATCGAGACTGAAGCAGGGATCATCAATGC
GCAGCTTGATGTACAATTAGATGCCTTAGAAAAAGCTTTCTCGACTATACTAAAAGCGAAGAACCCTGTAGACGAGCCAT
CTGAGACTTCATCATCCACGGATTCTTCTTCTTTATCTAATGATCAGGATAAGAAAGAATAA

Upstream 100 bases:

>100_bases
TAGCTTTATACAAAGTATAGAAAAATAACACGACAATAAAAGGAGCGGTGTTTTCTCTTCTGAGGTAAATCAGCCTCAAA
GATACTACGCCATAGTAAAG

Downstream 100 bases:

>100_bases
AGGTATTCACTATTATGCGATCCATTTTTCGATTTTCCCTTTGTTTTTTTACGCTGAGCGTCTCATGCTGTTTTGCTGAC
GCCAGTCTATATGAAAACTC

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKFFSLIFKDDDVSPNKKVLSPEAFSAFLDAKELLEKTKADSEAYVAETEQKCAQIRQEAKDQGFKEGSESWSKQIAFLE
EETKNLRIRVREALVPLAIASVRKIIGKELELHPETIVSIISQALKELTQNKHIIISVNPKDLPLVEKSRPELKNIVEYA
DSLILTAKPDVTPGGCIIETEAGIINAQLDVQLDALEKAFSTILKAKNPVDEPSETSSSTDSSSLSNDQDKKE

Sequences:

>Translated_233_residues
MKFFSLIFKDDDVSPNKKVLSPEAFSAFLDAKELLEKTKADSEAYVAETEQKCAQIRQEAKDQGFKEGSESWSKQIAFLE
EETKNLRIRVREALVPLAIASVRKIIGKELELHPETIVSIISQALKELTQNKHIIISVNPKDLPLVEKSRPELKNIVEYA
DSLILTAKPDVTPGGCIIETEAGIINAQLDVQLDALEKAFSTILKAKNPVDEPSETSSSTDSSSLSNDQDKKE
>Mature_233_residues
MKFFSLIFKDDDVSPNKKVLSPEAFSAFLDAKELLEKTKADSEAYVAETEQKCAQIRQEAKDQGFKEGSESWSKQIAFLE
EETKNLRIRVREALVPLAIASVRKIIGKELELHPETIVSIISQALKELTQNKHIIISVNPKDLPLVEKSRPELKNIVEYA
DSLILTAKPDVTPGGCIIETEAGIINAQLDVQLDALEKAFSTILKAKNPVDEPSETSSSTDSSSLSNDQDKKE

Specific function: Required for the export process of the Yop proteins [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018035
- InterPro:   IPR012842 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 25841; Mature: 25841

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFSLIFKDDDVSPNKKVLSPEAFSAFLDAKELLEKTKADSEAYVAETEQKCAQIRQEA
CCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KDQGFKEGSESWSKQIAFLEEETKNLRIRVREALVPLAIASVRKIIGKELELHPETIVSI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ISQALKELTQNKHIIISVNPKDLPLVEKSRPELKNIVEYADSLILTAKPDVTPGGCIIET
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCCCCCEEEEE
EAGIINAQLDVQLDALEKAFSTILKAKNPVDEPSETSSSTDSSSLSNDQDKKE
CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFFSLIFKDDDVSPNKKVLSPEAFSAFLDAKELLEKTKADSEAYVAETEQKCAQIRQEA
CCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KDQGFKEGSESWSKQIAFLEEETKNLRIRVREALVPLAIASVRKIIGKELELHPETIVSI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ISQALKELTQNKHIIISVNPKDLPLVEKSRPELKNIVEYADSLILTAKPDVTPGGCIIET
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCCCCCEEEEE
EAGIINAQLDVQLDALEKAFSTILKAKNPVDEPSETSSSTDSSSLSNDQDKKE
CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1860816 [H]