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The map label for this gene is yscS

Identifier: 15618733

GI number: 15618733

Start: 932375

End: 932662

Strand: Reverse

Name: yscS

Synonym: CPn0824

Alternate gene names: 15618733

Gene position: 932662-932375 (Counterclockwise)

Preceding gene: 15618734

Following gene: 15618732

Centisome position: 75.81

GC content: 38.54

Gene sequence:

>288_bases
GTGTTAGCATTTTTCGCAACTAGTTTCAAATCTGTTCTTTTTGAGTACTCCTACCAATCATTATTACTTATTTTGATTGT
TTCGGCACCTCCCATCATCTTAGCTTCCATAGTCGGGATTATGGTTGCGATCTTCCAAGCCGCAACACAAATCCAAGAAC
AGACCTTCGCTTTTGCAGTCAAACTAGTCGTGATTTTTGGAACCTTAATGATCTCTGGAGGGTGGCTTAGCAATATGATT
TTACGCTTTGCAGGTCAGATTTTCCAAAACTTCTATAAATGGAAATAA

Upstream 100 bases:

>100_bases
CGATTTCGTTACCTTTAAAGTTACTTTTGATCGTCATGGTAGACGGATGGACATTACTGCTCCAAGGGCTTATGATCAGC
TTTAAATAAGGACACGTGCC

Downstream 100 bases:

>100_bases
AGAGCTTATGGGAATCTCTCTACCAGAGCTTTTTTCCAACCTAGGTTCTGCTTACTTAGATTATATCTTTCAACATCCTC
CGGCCTATGTTTGGTCAGTT

Product: Yop proteins translocation protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MLAFFATSFKSVLFEYSYQSLLLILIVSAPPIILASIVGIMVAIFQAATQIQEQTFAFAVKLVVIFGTLMISGGWLSNMI
LRFAGQIFQNFYKWK

Sequences:

>Translated_95_residues
MLAFFATSFKSVLFEYSYQSLLLILIVSAPPIILASIVGIMVAIFQAATQIQEQTFAFAVKLVVIFGTLMISGGWLSNMI
LRFAGQIFQNFYKWK
>Mature_95_residues
MLAFFATSFKSVLFEYSYQSLLLILIVSAPPIILASIVGIMVAIFQAATQIQEQTFAFAVKLVVIFGTLMISGGWLSNMI
LRFAGQIFQNFYKWK

Specific function: Component of the Yop secretion machinery [H]

COG id: COG4794

COG function: function code U; Type III secretory pathway, component EscS

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006306 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 10664; Mature: 10664

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFFATSFKSVLFEYSYQSLLLILIVSAPPIILASIVGIMVAIFQAATQIQEQTFAFAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVVIFGTLMISGGWLSNMILRFAGQIFQNFYKWK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLAFFATSFKSVLFEYSYQSLLLILIVSAPPIILASIVGIMVAIFQAATQIQEQTFAFAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVVIFGTLMISGGWLSNMILRFAGQIFQNFYKWK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8300512; 9746557; 9748454; 11586360 [H]