| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618600
GI number: 15618600
Start: 771433
End: 772680
Strand: Reverse
Name: Not Available
Synonym: CPn0690
Alternate gene names: 15618600
Gene position: 772680-771433 (Counterclockwise)
Preceding gene: 15618601
Following gene: 15618599
Centisome position: 62.81
GC content: 41.27
Gene sequence:
>1248_bases GTGTTAGTTTCAATAGAGACATTTTCTTCTATTGCTTCGGGTTCTCCTGTGCAAAAAGCTGCGGAAGCTTGCTACACTCA ATATAGCAAGCAGCCTTCTTCAAAAGAGGTGCTTAGTAGCTTTTCTTGGATTCAGGAGCTTTCTCTTTTTCCTGATCGCT ATAATCTTGCGACTGGAGCTTCAGAACTAATTAAGCAACATTGGCTACACAATAACCATTCTTTAGCCTTTGAGTGTATT TTAATTAATGGAAAATACGAACCTTCGTTATCCCAGTTGCCTGAGGGGGTGATTGTCTGTGGTATAGACGAAGCTAGGGG ATCATTGTCTTCATTCATGCAAGGGTTTGATGTAAATAAGCATCCCTTAGCATTTTTAAATGCTGTTTGTTCTGAAGATC GGGGTGTAGTGATTTACATTCCTGAAGAGATGCAGACGAGCGATCCTATTTTTGTACGTCATATTAGTTTTCCTACAGTT TCGGATCATGATGTGATTTTCTCTCCTAGGATCGTCGTTATTTTAGGACAACGGGCGTCCGCTCAAATACAAATATCACA TGATGTTGATTTAGAGATGGTGGGTTCTAGTAAAACTATAGTCAATGGGGTTACCGAGCTCTTCGTTGGAGAAGGGGCGG ATCTTACAGTGTTTATGGTTCCAGGATATTCTGAAGAGGATACCTTGAGTTGGTCCACTATTGCGACGGTTGAGAAAGAT GCTATCTGCAGGATGACTCAGAATTTGCTTGAAAGTTGTCAAGGTTTCGGATGGTTTGACAATACGAGCTACATAGTCGG GAAGAAGGGACACGCAGAATCTCTAGTGTTAGTCCAATCGCCAAGAAAAACTTGGGTCAATAATTTAATGTCTCACGATG CTGAAGAGACGGTATCGCGTCAGAATATTAAATCGATTTTATATTCAGGGCATTTTCTATTTGAAGGGACAATTTCTATT TCTTCTCAAGGAGACTTGTCGGATGCGAATCAAAAGCATGATACGTTGTTATTAAGTTCAGAAGCTCGTGTATCTACATT TCCACGTTTAGAGATAGAAACAGACGAGGTGAAGGCATCCCACGGCGCTACAGTAGGACCTTTAGATCCTCAGCAGATCT TTTACATGCGTTCTCGAGGCATGACAGAGGCAGAGGCTCAGGAAAAACTCATACATGGGTTCCTAAAACAAGGATTAGTT TCCGATACGTTTTTGGGATCTTCTTTTCAGCTAAATCAAACCTCCTAG
Upstream 100 bases:
>100_bases TTAGATGGTCGAGTAGCGCTTTCAGGAGACGTTTCTTTGATGCATGAATTAGAAGCAAAAAGCTACCAAGAGGTGACTAA GCGTGTTGCGTGGAGATAAG
Downstream 100 bases:
>100_bases GTTTAGGATTTAGGGGGGGGGATGATCAGTGAAGAATTTAAAAGAAGATTTTCCGATTTTTGCTGCTAAAGCAAAAGAGA ACGAGCCTTTTATTTATTTA
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MLVSIETFSSIASGSPVQKAAEACYTQYSKQPSSKEVLSSFSWIQELSLFPDRYNLATGASELIKQHWLHNNHSLAFECI LINGKYEPSLSQLPEGVIVCGIDEARGSLSSFMQGFDVNKHPLAFLNAVCSEDRGVVIYIPEEMQTSDPIFVRHISFPTV SDHDVIFSPRIVVILGQRASAQIQISHDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPGYSEEDTLSWSTIATVEKD AICRMTQNLLESCQGFGWFDNTSYIVGKKGHAESLVLVQSPRKTWVNNLMSHDAEETVSRQNIKSILYSGHFLFEGTISI SSQGDLSDANQKHDTLLLSSEARVSTFPRLEIETDEVKASHGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLKQGLV SDTFLGSSFQLNQTS
Sequences:
>Translated_415_residues MLVSIETFSSIASGSPVQKAAEACYTQYSKQPSSKEVLSSFSWIQELSLFPDRYNLATGASELIKQHWLHNNHSLAFECI LINGKYEPSLSQLPEGVIVCGIDEARGSLSSFMQGFDVNKHPLAFLNAVCSEDRGVVIYIPEEMQTSDPIFVRHISFPTV SDHDVIFSPRIVVILGQRASAQIQISHDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPGYSEEDTLSWSTIATVEKD AICRMTQNLLESCQGFGWFDNTSYIVGKKGHAESLVLVQSPRKTWVNNLMSHDAEETVSRQNIKSILYSGHFLFEGTISI SSQGDLSDANQKHDTLLLSSEARVSTFPRLEIETDEVKASHGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLKQGLV SDTFLGSSFQLNQTS >Mature_415_residues MLVSIETFSSIASGSPVQKAAEACYTQYSKQPSSKEVLSSFSWIQELSLFPDRYNLATGASELIKQHWLHNNHSLAFECI LINGKYEPSLSQLPEGVIVCGIDEARGSLSSFMQGFDVNKHPLAFLNAVCSEDRGVVIYIPEEMQTSDPIFVRHISFPTV SDHDVIFSPRIVVILGQRASAQIQISHDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPGYSEEDTLSWSTIATVEKD AICRMTQNLLESCQGFGWFDNTSYIVGKKGHAESLVLVQSPRKTWVNNLMSHDAEETVSRQNIKSILYSGHFLFEGTISI SSQGDLSDANQKHDTLLLSSEARVSTFPRLEIETDEVKASHGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLKQGLV SDTFLGSSFQLNQTS
Specific function: FhuF function [C]
COG id: COG0719
COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0051 (ycf24) family [H]
Homologues:
Organism=Escherichia coli, GI1787971, Length=113, Percent_Identity=39.8230088495575, Blast_Score=85, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000825 - InterPro: IPR011542 [H]
Pfam domain/function: PF01458 UPF0051 [H]
EC number: NA
Molecular weight: Translated: 45806; Mature: 45806
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSIETFSSIASGSPVQKAAEACYTQYSKQPSSKEVLSSFSWIQELSLFPDRYNLATGA CEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCH SELIKQHWLHNNHSLAFECILINGKYEPSLSQLPEGVIVCGIDEARGSLSSFMQGFDVNK HHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHHCCCCC HPLAFLNAVCSEDRGVVIYIPEEMQTSDPIFVRHISFPTVSDHDVIFSPRIVVILGQRAS CHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEECCEEEEEECCCCC AQIQISHDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPGYSEEDTLSWSTIATVEKD EEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEHHHHH AICRMTQNLLESCQGFGWFDNTSYIVGKKGHAESLVLVQSPRKTWVNNLMSHDAEETVSR HHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHH QNIKSILYSGHFLFEGTISISSQGDLSDANQKHDTLLLSSEARVSTFPRLEIETDEVKAS HHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHC HGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLKQGLVSDTFLGSSFQLNQTS CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCC >Mature Secondary Structure MLVSIETFSSIASGSPVQKAAEACYTQYSKQPSSKEVLSSFSWIQELSLFPDRYNLATGA CEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCH SELIKQHWLHNNHSLAFECILINGKYEPSLSQLPEGVIVCGIDEARGSLSSFMQGFDVNK HHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHHCCCCC HPLAFLNAVCSEDRGVVIYIPEEMQTSDPIFVRHISFPTVSDHDVIFSPRIVVILGQRAS CHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEECCEEEEEECCCCC AQIQISHDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPGYSEEDTLSWSTIATVEKD EEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEHHHHH AICRMTQNLLESCQGFGWFDNTSYIVGKKGHAESLVLVQSPRKTWVNNLMSHDAEETVSR HHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHH QNIKSILYSGHFLFEGTISISSQGDLSDANQKHDTLLLSSEARVSTFPRLEIETDEVKAS HHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHC HGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLKQGLVSDTFLGSSFQLNQTS CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]