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The map label for this gene is yhhF

Identifier: 15618515

GI number: 15618515

Start: 696147

End: 696707

Strand: Reverse

Name: yhhF

Synonym: CPn0605

Alternate gene names: 15618515

Gene position: 696707-696147 (Counterclockwise)

Preceding gene: 15618516

Following gene: 15618514

Centisome position: 56.63

GC content: 39.04

Gene sequence:

>561_bases
GTGAGAATTTTAGCAGGTAAGTACAAAGGGAAATCCTTAAAAACATTTTCTAATCCACATATCCGACCTACTTCAGGTTT
AGTGAAAGAAGCGTTTTTCAGTATCTGTAGGGAAGATATAGAAGGGGCTGCTTTTTTAGATCTTTTTGCCGGGATGGGAG
CGATAGGTTTTGAAGCCCTAAGTCGTGGAGCTGCTTCTGTCGTATTCGTGGACATCTCTATAAAAGCAATACAATTAATA
CACACAAATAGTGCTTTACTCGGAGAACAACTTCCTGTCGTCATCTTTAGACAAGATGCTCAATCGGCAATTCAAAGACT
TATCAAACAAAAGAGATCCTTTGATCTAATCTATATAGATCCTCCTTACGAACTTTGTAATTGTTACGTAGAAACCCTTT
TACAGAAGATTGTTTCGGGAAACATCCTGAATCCTGAAGGGACTCTATTCCTAGAGAATGCCTCCGATGAAGAGATTGCT
TGTGAAGGTTTGACCCTAAGGCGAAGAAGAAAACTTGGGAAAACATATCTTGCTGAGTATATTGTGGAAAAGGACCCTTA
A

Upstream 100 bases:

>100_bases
ATAAAGTGCAACGCCCTATAGATGGATTCGGTAATATCCGAGGGATCCACTACATACTAGTGGCTGCTGATTACGTAAAC
TTTGTTCCTCAAGAGGTGAT

Downstream 100 bases:

>100_bases
GACTGAGGAAATATCGAATAGTCCTTCTTAATATCAGAAAGTACTGATTTTCAATGTGATAATTTTTTTATATGTTTCTA
TTTTTTCAGATATTTATACG

Product: methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRILAGKYKGKSLKTFSNPHIRPTSGLVKEAFFSICREDIEGAAFLDLFAGMGAIGFEALSRGAASVVFVDISIKAIQLI
HTNSALLGEQLPVVIFRQDAQSAIQRLIKQKRSFDLIYIDPPYELCNCYVETLLQKIVSGNILNPEGTLFLENASDEEIA
CEGLTLRRRRKLGKTYLAEYIVEKDP

Sequences:

>Translated_186_residues
MRILAGKYKGKSLKTFSNPHIRPTSGLVKEAFFSICREDIEGAAFLDLFAGMGAIGFEALSRGAASVVFVDISIKAIQLI
HTNSALLGEQLPVVIFRQDAQSAIQRLIKQKRSFDLIYIDPPYELCNCYVETLLQKIVSGNILNPEGTLFLENASDEEIA
CEGLTLRRRRKLGKTYLAEYIVEKDP
>Mature_186_residues
MRILAGKYKGKSLKTFSNPHIRPTSGLVKEAFFSICREDIEGAAFLDLFAGMGAIGFEALSRGAASVVFVDISIKAIQLI
HTNSALLGEQLPVVIFRQDAQSAIQRLIKQKRSFDLIYIDPPYELCNCYVETLLQKIVSGNILNPEGTLFLENASDEEIA
CEGLTLRRRRKLGKTYLAEYIVEKDP

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=123, Percent_Identity=31.7073170731707, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20714; Mature: 20714

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILAGKYKGKSLKTFSNPHIRPTSGLVKEAFFSICREDIEGAAFLDLFAGMGAIGFEAL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
SRGAASVVFVDISIKAIQLIHTNSALLGEQLPVVIFRQDAQSAIQRLIKQKRSFDLIYID
CCCCCEEEEEEEEEEEEEEEECCCHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEC
PPYELCNCYVETLLQKIVSGNILNPEGTLFLENASDEEIACEGLTLRRRRKLGKTYLAEY
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCCHHHHHHHHHHHHHHHH
IVEKDP
HHCCCC
>Mature Secondary Structure
MRILAGKYKGKSLKTFSNPHIRPTSGLVKEAFFSICREDIEGAAFLDLFAGMGAIGFEAL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
SRGAASVVFVDISIKAIQLIHTNSALLGEQLPVVIFRQDAQSAIQRLIKQKRSFDLIYID
CCCCCEEEEEEEEEEEEEEEECCCHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEC
PPYELCNCYVETLLQKIVSGNILNPEGTLFLENASDEEIACEGLTLRRRRKLGKTYLAEY
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCCHHHHHHHHHHHHHHHH
IVEKDP
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]