Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15618400

GI number: 15618400

Start: 570093

End: 570965

Strand: Reverse

Name: Not Available

Synonym: CPn0489

Alternate gene names: NA

Gene position: 570965-570093 (Counterclockwise)

Preceding gene: 15618402

Following gene: 15618399

Centisome position: 46.41

GC content: 39.75

Gene sequence:

>873_bases
ATGCAGATTCCAAGAAGCATTGGTACTCACGATGGTTCTTTCCATGCGGATGAGGTCACAGCGTGTGCTCTCCTTATTAT
TTTCGATCTTGTGGATGAAAATAAAATTATACGCTCTCGAGATCCTGTCGTATTATCGAAATGTGAATATGTTTGTGATG
TCGGTGGTGTTTATTCTATAGAAAACAAGCGTTTTGATCATCATCAAGTCTCTTATGATGGATCTTGGAGTAGTGCAGGT
ATGATTCTGCATTATCTTAAAGAGTTTGGTTATATGGATTGTGAAGAATATCATTTCCTTAACAACACTTTGGTACATGG
TGTGGATGAACAAGATAATGGCAGATTCTTCTCTAAGGAGGGATTTTGTTCGTTTTCTGATATTATTAAAATTTATAATC
CTCGCGAGGAAGAAGAAACTAATTCGGATGCGGATTTTTCTTGTGCTTTGCATTTTACCATCGACTTTTTGTGTCGGCTA
AGGAAGAAGTTTCAGTATGATCGAGTTTGTAGGGGGATTGTCAGAGAAGCCATGGAAACCGAGGATATGTGTTTATATTT
TGATCGTCCTTTAGCATGGCAAGAAAATTTCTTTTTTTTAGGGGGAGAGAAGCACCCTGCAGCTTTTGTTTGTTTTCCTT
CCTGCGATCAATGGATTTTACGAGGGATTCCTCCGAATTTAGATCGCCGTATGGACGTTCGTGTTCCTTTCCCTGAGAAT
TGGGCAGGTTTGTTAGGTAAAGAGTTGTCCAAAGTATCAGGGATTCCTGGGGCTGTGTTCTGCCATAAAGGTCTTTTCCT
TTCTGTATGGACAAATAGAGAAAGTTGCCAACGTGCTTTGCGGTTAACGTTACAAGATCGAGGGATCATATGA

Upstream 100 bases:

>100_bases
TCTCTTGGAGAGATTGAGTAAAATGTAAAGAATAGTCTTTGCAATTGAGAATTATTTCTCTCTGGTTACAATGGAGGATT
GGCTAAGGAGGATAGTAGGT

Downstream 100 bases:

>100_bases
CAGTATTCAAACAAATTATCGATGGATTGATAGATTGTGAAAAGGTATTTGAAAACGAAAATTTCATAGCTATAAAAGAT
CGTTTTCCTCAAGCTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQVSYDGSWSSAG
MILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRL
RKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMDVRVPFPEN
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII

Sequences:

>Translated_290_residues
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQVSYDGSWSSAG
MILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRL
RKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMDVRVPFPEN
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
>Mature_290_residues
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQVSYDGSWSSAG
MILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRL
RKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMDVRVPFPEN
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII

Specific function: Unknown

COG id: COG4286

COG function: function code S; Uncharacterized conserved protein related to MYG1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0160 (MYG1) family [H]

Homologues:

Organism=Homo sapiens, GI145275185, Length=334, Percent_Identity=30.5389221556886, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI25150283, Length=324, Percent_Identity=28.7037037037037, Blast_Score=113, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6321004, Length=330, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24645226, Length=77, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24645224, Length=77, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45551849, Length=77, Percent_Identity=45.4545454545455, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003226 [H]

Pfam domain/function: PF03690 UPF0160 [H]

EC number: NA

Molecular weight: Translated: 33474; Mature: 33474

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHCCCCEEEE
ENKRFDHHQVSYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKE
CCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCEECCC
GFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRLRKKFQYDRVCRGIVREAMET
CCCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
EDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMDVRVPFPEN
CCEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCC
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
HHHHHHHHHHHHCCCCCHHEECCCEEEEEECCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHCCCCEEEE
ENKRFDHHQVSYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKE
CCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCEECCC
GFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRLRKKFQYDRVCRGIVREAMET
CCCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
EDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMDVRVPFPEN
CCEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCC
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
HHHHHHHHHHHHCCCCCHHEECCCEEEEEECCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]