| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618270
GI number: 15618270
Start: 398588
End: 399889
Strand: Reverse
Name: Not Available
Synonym: CPn0355
Alternate gene names: NA
Gene position: 399889-398588 (Counterclockwise)
Preceding gene: 15618271
Following gene: 15618264
Centisome position: 32.51
GC content: 38.94
Gene sequence:
>1302_bases ATGAGCATGACGATCGTTCCACATGCTTTATTTAAAAATCATTGCGAGTGTCATTCTACCTTTCCTTTGAGTTCAAGGAC TATTGTAAGAATAGCCATTGCCAGCCTCTTTTGTATAGGTGCATTAGCAGCTTTAGGCTGTTTGGCTCCTCCCGTTTCTT ATATTGTTGGGAGTGTTTTAGCTTTTATTGCCTTTGTCATTCTTTCTTTAGTAATTTTAGCTTTGATTTTTGGAGAGAAG AAGCTTCCACCAACACCAAGAATCATTCCTGATAGATTTACTCACGTGATAGATGAAGCTTATGGCCTTTCAATCTCTGC ATTTGTAAGAGAACAGCAGGTAACATTAGCCGAGTTTAGACAATTTTCTACTGCCCTGTTGTGTAACATATCTCCTGAAG AGAAAATCAAACAATTGCCTTCTGAATTGCGAAGTAAAGTAGAGAGTTTTGGTATTAGCAGGCTCGCAGGTGATTTAGAA AAGAATAATTGGCCAATATTTGAAGATCTTTTAAGCCAAACCTGCCCGTTATATTGGCTTCAGAAATTTATATCAGCAGG AGATCCACAAGTTTGTAGAGACCTAGGTGTCCCTAGAGAATGTTATGGGTACTATTGGCTAGGGCCTTTGGGATACAGTA CAGCTAAGGCTACAATTTTTTGTAAAGAGACGCATCATATTCTTCAACAATTAACGAAAGAGGACGTTCTTTTATTAAAA AACAAGGCTCTTCAAGAGAAATGGGATACTGATGAAGTCAAAGCAATTGTAGAGCGTATCTACACTACCTATACGGCACG AGGAACTCTAAAGACCGAAGCAGGGGGACTTACAAAAGAGACAATCAGTAAGGAATTGCTATTGTTGAGCTTGCATGGCT ATTCTTTTGATCAGCTACAGCTGATCACTCAACTTCCTAGAGATGCTTGGGATTGGCTGTGTTTTGTAGATAACAGTACC GCATACAACCTTCAGCTTTGTGCTCTTGTAGGAGCTTTGTCATCCCAAAATCTTCTTGACGAATCTTCTATCGATTTTGA TGTAAACCTAGGCCTGTATGTGATTCAGGATCTAAAAGAAGCTGTTCAAGCATTTTCTGCTTCTGATGAGCCAAAGAAAG AACTAGGTAAATTCTTGTTAAGGCATTTGAGTTCAGTTTCTAAGCGATTAGAGAGTGTATTAAGACAGGGTCTTCACAGA ATAGCTCTAGAGCATGGAAATGCCAGAGCTAGGGTTTATGACGTCAATTTTGTAACAGGAGCTAGAATTCATAGGAAGAC GAGTATCTTCTTTAAAGACTAA
Upstream 100 bases:
>100_bases TTTCATGGGATTTTTTATTACAGGAAATTCTTGAATTAGAGATTTTTATTTACACATAATCTATACTGCCTTCAATAGAT CTATATCTAAGGAGTTGGCT
Downstream 100 bases:
>100_bases ACCAGGTAACTAGCTTTTTAGTCTCGAAAGGGGCTACGAGAGGGAGTAGAATTTTTCTTATTCCAAAATAGAAATCTCTA ACCTATCAGCAGGGAGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFGEK KLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLE KNNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLK NKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDNST AYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHR IALEHGNARARVYDVNFVTGARIHRKTSIFFKD
Sequences:
>Translated_433_residues MSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFGEK KLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLE KNNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLK NKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDNST AYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHR IALEHGNARARVYDVNFVTGARIHRKTSIFFKD >Mature_432_residues SMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFGEKK LPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEK NNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLKN KALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDNSTA YNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRI ALEHGNARARVYDVNFVTGARIHRKTSIFFKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48619; Mature: 48488
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVL CCCEECCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AFIAFVILSLVILALIFGEKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEKNNWPIFEDLLSQTCPLYWL HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH QKFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLK HHHHCCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH NKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQ HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHEEEEECCCCHHHHH LITQLPRDAWDWLCFVDNSTAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKE HHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHH AVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRIALEHGNARARVYDVNFVTG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC ARIHRKTSIFFKD CHHHHCCEEEECC >Mature Secondary Structure SMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVL CCEECCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AFIAFVILSLVILALIFGEKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEKNNWPIFEDLLSQTCPLYWL HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH QKFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLK HHHHCCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH NKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQ HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHEEEEECCCCHHHHH LITQLPRDAWDWLCFVDNSTAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKE HHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHH AVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRIALEHGNARARVYDVNFVTG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC ARIHRKTSIFFKD CHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA