| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15617944
GI number: 15617944
Start: 30600
End: 32687
Strand: Reverse
Name: Not Available
Synonym: CPn0020
Alternate gene names: NA
Gene position: 32687-30600 (Counterclockwise)
Preceding gene: 15617945
Following gene: 15617935
Centisome position: 2.66
GC content: 42.96
Gene sequence:
>2088_bases ATGAAACGTTGCTTCTTATTTCTAGCTTCCTTTGTTCTTATGGGTTCCTCAGCTGATGCTTTGACTCATCAAGAGGCTGT GAAAAAGAAAAACTCCTATCTTAGTCACTTTAAGAGTGTTTCTGGGATTGTGACCATCGAAGATGGGGTATTGAATATCC ATAACAACCTGCGGATACAAGCCAATAAAGTGTATGTAGAAAATACTGTGGGTCAAAGCCTGAAGCTTGTCGCACATGGC AATGTTATGGTGAACTATAGGGCAAAAACCCTAGTTTGTGATTACCTAGAGTATTACGAAGATACAGACTCTTGTCTTCT TACTAATGGAAGATTCGCGATGTATCCTTGGTTTCTAGGGGGGTCTATGATCACTCTAACCCCAGAAACCATAGTCATTC GGAAGGGATATATCTCTACCTCCGAGGGTCCCAAAAAAGACCTGTGCCTCTCCGGAGATTACCTGGAATATTCTTCAGAT AGTCTTCTTTCTATAGGGAAGACAACATTAAGGGTGTGTCGCATTCCGATACTTTTCTTACCTCCATTTTCTATCATGCC TATGGAGATCCCTAAGCCTCCGATAAACTTTCGAGGAGGAACAGGAGGATTTCTGGGATCCTATTTGGGGATGAGCTACT CGCCGATTTCTAGGAAGCATTTCTCCTCGACATTTTTCTTGGATAGCTTTTTCAAGCATGGCGTCGGCATGGGATTCAAC CTCCATTGTTCTCAGAAGCAGGTTCCTGAGAATGTCTTCAATATGAAAAGCTATTATGCCCACCGCCTTGCTATCGATAT GGCAGAAGCTCATGATCGCTATCGCCTACACGGAGATTTCTGCTTCACGCATAAGCATGTAAATTTTTCTGGAGAATACC ATCTCAGCGATAGTTGGGAAACTGTTGCTGACATTTTCCCCAACAACTTCATGTTGAAAAATACAGGCCCCACACGTGTC GATTGCACTTGGAATGACAACTATTTTGAAGGGTATCTCACCTCTTCTGTTAAGGTAAACTCTTTCCAAAATGCCAACCA AGAGCTCCCTTATTTAACATTAAGGCAGTACCCGATTTCTATTTATAATACGGGAGTGTACCTTGAAAACATCGTAGAAT GTGGGTATTTAAACTTTGCTTTTAGCGATCATATCGTTGGCGAGAATTTCTCTTCACTACGTCTTGCTGCGCGCCCTAAG CTCCATAAAACTGTGCCTCTACCTATAGGAACGCTCTCCTCCACCCTAGGGAGTTCTCTGATTTACTATAGCGATGTTCC TGAGATCTCCTCGCGCCATAGTCAGCTTTCCGCGAAGCTACAACTTGATTATCGCTTTCTATTACATAAGTCCTACATTC AAAGACGCCATATTATAGAGCCGTTCGTTACCTTCATTACAGAGACTCGTCCTCTAGCTAAGAATGAAGATCATTATATC TTTTCTATTCAAGATGCCTTTCACTCCTTAAACCTTCTGAAAGCGGGTATAGATACCTCGGTACTGAGTAAGACTAACCC TCGATTCCCGAGAATCCATGCGAAGCTGTGGACTACCCACATCTTGAGCAATACAGAAAGCAAACCCACGTTTCCCAAAA CTGCATGCGAGCTATCTCTACCTTTTGGAAAGAAAAATACAGTCTCCTTAGATGCTGAATGGATTTGGAAAAAGCACTGT TGGGATCACATGAACATACGTTGGGAGTGGATCGGAAATGACAATGTGGCTATGACTCTAGAATCCCTGCATAGAAGCAA ATACAGCCTGATTAAGTGTGACAGGGAGAACTTCATTTTAGATGTCAGCCGTCCCATTGACCAGCTTTTAGACTCCCCTC TCTCTGATCATAGGAATCTCATTTTAGGGAAATTATTTGTACGACCTCATCCCTGTTGGAATTACCGCTTATCCTTACGC TATGGCTGGCATCGCCAGGACACTCCGAACTACCTAGAATACCAGATGATTCTAGGGACGAAGATCTTCGAACATTGGCA GCTCTATGGGGTGTATGAACGCCGAGAAGCAGATAGTCGATTTTTCTTCTTCTTAAAGCTCGACAAACCTAAAAAACCTC CCTTCTAA
Upstream 100 bases:
>100_bases CGTTTATTGATACAACTGATGACGGAAGGAGATGCAAAAAATTTCCCAGTCCTTGCAGGCTTACTCATAAAAATTGTGGA GTAACCCCAACCTACGTCTT
Downstream 100 bases:
>100_bases CCTCTGACTTAGACATGAGAATGAACCTCCTGTGTCAAGTCATGGATCCCTTACCATAGAGAATGCAATAGATCCAGGTG AGGTCTCGTCAGACATGGGG
Product: outer membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVLNIHNNLRIQANKVYVENTVGQSLKLVAHG NVMVNYRAKTLVCDYLEYYEDTDSCLLTNGRFAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCLSGDYLEYSSD SLLSIGKTTLRVCRIPILFLPPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFFKHGVGMGFN LHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWETVADIFPNNFMLKNTGPTRV DCTWNDNYFEGYLTSSVKVNSFQNANQELPYLTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFSSLRLAARPK LHKTVPLPIGTLSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRPLAKNEDHYI FSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSLPFGKKNTVSLDAEWIWKKHC WDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFILDVSRPIDQLLDSPLSDHRNLILGKLFVRPHPCWNYRLSLR YGWHRQDTPNYLEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF
Sequences:
>Translated_695_residues MKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVLNIHNNLRIQANKVYVENTVGQSLKLVAHG NVMVNYRAKTLVCDYLEYYEDTDSCLLTNGRFAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCLSGDYLEYSSD SLLSIGKTTLRVCRIPILFLPPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFFKHGVGMGFN LHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWETVADIFPNNFMLKNTGPTRV DCTWNDNYFEGYLTSSVKVNSFQNANQELPYLTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFSSLRLAARPK LHKTVPLPIGTLSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRPLAKNEDHYI FSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSLPFGKKNTVSLDAEWIWKKHC WDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFILDVSRPIDQLLDSPLSDHRNLILGKLFVRPHPCWNYRLSLR YGWHRQDTPNYLEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF >Mature_695_residues MKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVLNIHNNLRIQANKVYVENTVGQSLKLVAHG NVMVNYRAKTLVCDYLEYYEDTDSCLLTNGRFAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCLSGDYLEYSSD SLLSIGKTTLRVCRIPILFLPPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFFKHGVGMGFN LHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWETVADIFPNNFMLKNTGPTRV DCTWNDNYFEGYLTSSVKVNSFQNANQELPYLTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFSSLRLAARPK LHKTVPLPIGTLSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRPLAKNEDHYI FSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSLPFGKKNTVSLDAEWIWKKHC WDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFILDVSRPIDQLLDSPLSDHRNLILGKLFVRPHPCWNYRLSLR YGWHRQDTPNYLEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80255; Mature: 80255
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVLNIHNNLRIQ CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCEEEE ANKVYVENTVGQSLKLVAHGNVMVNYRAKTLVCDYLEYYEDTDSCLLTNGRFAMYPWFLG EEEEEEECCCCCEEEEEEECCEEEEEEHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEC GSMITLTPETIVIRKGYISTSEGPKKDLCLSGDYLEYSSDSLLSIGKTTLRVCRIPILFL CEEEEECCCEEEEEECEECCCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHCCCEEEE PPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFFKHGVGMGFN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEE LHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWE EECCHHHCCHHHHHHHHHHHHHHEEEHHHCCCCEEEECEEEEEEEEECCCCEEEECCCHH TVADIFPNNFMLKNTGPTRVDCTWNDNYFEGYLTSSVKVNSFQNANQELPYLTLRQYPIS HHHHHCCCCEEEECCCCCEEEEEECCCCEEEEEECCEEECCCCCCCCCCCEEEEECCCEE IYNTGVYLENIVECGYLNFAFSDHIVGENFSSLRLAARPKLHKTVPLPIGTLSSTLGSSL EEECCHHHHHHHHCCEEEEEECCCCCCCCHHHEEEECCCCCCCCCCCCCHHHHHHHCCCE IYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRPLAKNEDHYI EEECCCCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE FSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSL EEEHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEEC PFGKKNTVSLDAEWIWKKHCWDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFIL CCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHCCCEEEEEECCCCEEE DVSRPIDQLLDSPLSDHRNLILGKLFVRPHPCWNYRLSLRYGWHRQDTPNYLEYQMILGT ECCHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHH KIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF HHHHHHHEEEEHHHCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVLNIHNNLRIQ CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCEEEE ANKVYVENTVGQSLKLVAHGNVMVNYRAKTLVCDYLEYYEDTDSCLLTNGRFAMYPWFLG EEEEEEECCCCCEEEEEEECCEEEEEEHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEC GSMITLTPETIVIRKGYISTSEGPKKDLCLSGDYLEYSSDSLLSIGKTTLRVCRIPILFL CEEEEECCCEEEEEECEECCCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHCCCEEEE PPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFFKHGVGMGFN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEE LHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWE EECCHHHCCHHHHHHHHHHHHHHEEEHHHCCCCEEEECEEEEEEEEECCCCEEEECCCHH TVADIFPNNFMLKNTGPTRVDCTWNDNYFEGYLTSSVKVNSFQNANQELPYLTLRQYPIS HHHHHCCCCEEEECCCCCEEEEEECCCCEEEEEECCEEECCCCCCCCCCCEEEEECCCEE IYNTGVYLENIVECGYLNFAFSDHIVGENFSSLRLAARPKLHKTVPLPIGTLSSTLGSSL EEECCHHHHHHHHCCEEEEEECCCCCCCCHHHEEEECCCCCCCCCCCCCHHHHHHHCCCE IYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRPLAKNEDHYI EEECCCCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE FSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSL EEEHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEEC PFGKKNTVSLDAEWIWKKHCWDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFIL CCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHCCCEEEEEECCCCEEE DVSRPIDQLLDSPLSDHRNLILGKLFVRPHPCWNYRLSLRYGWHRQDTPNYLEYQMILGT ECCHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHH KIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF HHHHHHHEEEEHHHCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA